Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
C9orf72Q96LT7 CTHRC1P1-201ENST00000605383 469 ntBASIC1.1□□□□□ -2.23
C9orf72Q96LT7 AC005520.5-201ENST00000613926 164 ntBASIC1.1□□□□□ -2.23
C9orf72Q96LT7 AC008147.4-201ENST00000617570 1204 ntBASIC1.1□□□□□ -2.23
C9orf72Q96LT7 SNORA43.4-201ENST00000629559 138 ntBASIC1.1□□□□□ -2.23
C9orf72Q96LT7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.1□□□□□ -2.23
C9orf72Q96LT7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.1□□□□□ -2.23
C9orf72Q96LT7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.09□□□□□ -2.23
C9orf72Q96LT7 AC027514.1-201ENST00000588561 1603 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 MIR96-201ENST00000362288 78 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 RNA5SP327-201ENST00000362494 101 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 Y_RNA.191-201ENST00000363972 113 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 Y_RNA.224-201ENST00000364308 111 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 RNU6-282P-201ENST00000365357 103 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 AL117342.1-201ENST00000404861 406 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 SNRPEP10-201ENST00000420249 274 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 MRPL35P3-201ENST00000421557 364 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.09□□□□□ -2.23
C9orf72Q96LT7 AC069257.2-201ENST00000441819 155 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 AC073910.1-201ENST00000445047 438 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 RPS29P28-201ENST00000446439 141 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 AC087343.1-201ENST00000477341 475 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.09□□□□□ -2.23
C9orf72Q96LT7 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.09□□□□□ -2.23
C9orf72Q96LT7 RNA5SP384-201ENST00000516615 116 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 RNU6-856P-201ENST00000516959 98 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
C9orf72Q96LT7 RAB11AP2-201ENST00000545905 639 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.09□□□□□ -2.23
C9orf72Q96LT7 AC136443.5-201ENST00000603741 370 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 RNU6-85P-201ENST00000605989 107 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 AL136370.1-201ENST00000608166 691 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 AL136221.1-201ENST00000621449 509 ntBASIC1.09□□□□□ -2.23
C9orf72Q96LT7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.09□□□□□ -2.23
C9orf72Q96LT7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
C9orf72Q96LT7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
C9orf72Q96LT7 RNU6-297P-201ENST00000384636 107 ntBASIC1.08□□□□□ -2.24
C9orf72Q96LT7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.08□□□□□ -2.24
C9orf72Q96LT7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.08□□□□□ -2.24
C9orf72Q96LT7 COX6CP10-201ENST00000416832 224 ntBASIC1.08□□□□□ -2.24
C9orf72Q96LT7 AC090960.1-201ENST00000421072 306 ntBASIC1.08□□□□□ -2.24
C9orf72Q96LT7 AC060773.1-201ENST00000421698 310 ntBASIC1.08□□□□□ -2.24
C9orf72Q96LT7 CST2P1-201ENST00000425770 87 ntBASIC1.08□□□□□ -2.24
C9orf72Q96LT7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.08□□□□□ -2.24
C9orf72Q96LT7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.08□□□□□ -2.24
C9orf72Q96LT7 AC132479.1-201ENST00000449160 144 ntBASIC1.08□□□□□ -2.24
C9orf72Q96LT7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.08□□□□□ -2.24
C9orf72Q96LT7 GMFBP1-201ENST00000467831 427 ntBASIC1.08□□□□□ -2.24
C9orf72Q96LT7 AL133373.1-201ENST00000497098 94 ntBASIC1.08□□□□□ -2.24
C9orf72Q96LT7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.08□□□□□ -2.24
C9orf72Q96LT7 AC011406.1-201ENST00000512440 370 ntBASIC1.08□□□□□ -2.24
C9orf72Q96LT7 MIR4452-201ENST00000583004 71 ntBASIC1.08□□□□□ -2.24
C9orf72Q96LT7 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
C9orf72Q96LT7 AC007494.3-201ENST00000624660 743 ntBASIC1.08□□□□□ -2.24
C9orf72Q96LT7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
C9orf72Q96LT7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
C9orf72Q96LT7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
C9orf72Q96LT7 SNORD114-22-201ENST00000365423 72 ntBASIC1.07□□□□□ -2.24
C9orf72Q96LT7 RNU2-9P-201ENST00000410194 145 ntBASIC1.07□□□□□ -2.24
C9orf72Q96LT7 SNX2P2-201ENST00000424553 323 ntBASIC1.07□□□□□ -2.24
C9orf72Q96LT7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.07□□□□□ -2.24
C9orf72Q96LT7 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.07□□□□□ -2.24
C9orf72Q96LT7 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
C9orf72Q96LT7 AL163195.1-201ENST00000496941 348 ntBASIC1.07□□□□□ -2.24
C9orf72Q96LT7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.07□□□□□ -2.24
C9orf72Q96LT7 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.07□□□□□ -2.24
C9orf72Q96LT7 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.07□□□□□ -2.24
C9orf72Q96LT7 RNU7-40P-201ENST00000516397 64 ntBASIC1.07□□□□□ -2.24
C9orf72Q96LT7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.07□□□□□ -2.24
C9orf72Q96LT7 AP002963.1-201ENST00000530590 184 ntBASIC1.07□□□□□ -2.24
C9orf72Q96LT7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.07□□□□□ -2.24
C9orf72Q96LT7 MTCO3P23-201ENST00000561363 289 ntBASIC1.07□□□□□ -2.24
C9orf72Q96LT7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.07□□□□□ -2.24
C9orf72Q96LT7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.07□□□□□ -2.24
C9orf72Q96LT7 AL365434.2-201ENST00000607979 234 ntBASIC1.07□□□□□ -2.24
C9orf72Q96LT7 MIR8065-201ENST00000620577 100 ntBASIC1.07□□□□□ -2.24
C9orf72Q96LT7 AC009033.1-201ENST00000624279 431 ntBASIC1.07□□□□□ -2.24
C9orf72Q96LT7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.07□□□□□ -2.24
C9orf72Q96LT7 OR4G1P-203ENST00000641984 1631 ntBASIC1.07□□□□□ -2.24
C9orf72Q96LT7 AC009541.1-201ENST00000438279 2662 ntBASIC1.06□□□□□ -2.24
C9orf72Q96LT7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
C9orf72Q96LT7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
C9orf72Q96LT7 RNU6-181P-201ENST00000363225 107 ntBASIC1.06□□□□□ -2.24
C9orf72Q96LT7 Y_RNA.116-201ENST00000363292 103 ntBASIC1.06□□□□□ -2.24
C9orf72Q96LT7 SNORA4.2-201ENST00000365313 147 ntBASIC1.06□□□□□ -2.24
C9orf72Q96LT7 RNU6-1080P-201ENST00000383982 107 ntBASIC1.06□□□□□ -2.24
C9orf72Q96LT7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.06□□□□□ -2.24
C9orf72Q96LT7 AC133104.1-201ENST00000429100 218 ntBASIC1.06□□□□□ -2.24
C9orf72Q96LT7 USP9YP14-201ENST00000430663 563 ntBASIC1.06□□□□□ -2.24
C9orf72Q96LT7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.06□□□□□ -2.24
C9orf72Q96LT7 C1DP4-201ENST00000455429 424 ntBASIC1.06□□□□□ -2.24
C9orf72Q96LT7 snoU13.6-201ENST00000458785 104 ntBASIC1.06□□□□□ -2.24
C9orf72Q96LT7 SNORD42A-201ENST00000459584 64 ntBASIC1.06□□□□□ -2.24
C9orf72Q96LT7 RPS26P45-201ENST00000471748 340 ntBASIC1.06□□□□□ -2.24
C9orf72Q96LT7 AC010486.2-201ENST00000505572 483 ntBASIC1.06□□□□□ -2.24
C9orf72Q96LT7 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.06□□□□□ -2.24
C9orf72Q96LT7 AC067942.3-201ENST00000512025 362 ntBASIC1.06□□□□□ -2.24
C9orf72Q96LT7 RNU6-445P-201ENST00000516949 107 ntBASIC1.06□□□□□ -2.24
C9orf72Q96LT7 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.06□□□□□ -2.24
C9orf72Q96LT7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms