Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC239868.4-201ENST00000608318 671 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 AC068792.1-201ENST00000621354 417 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 U8.5-201ENST00000364528 136 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 RNU6-747P-201ENST00000390928 104 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 RNU6-241P-201ENST00000391148 104 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.43□□□□□ -2.48
SPG11Q96JI7 RPL39P39-201ENST00000455840 151 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 SNORD54-201ENST00000459159 67 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 AC023157.2-201ENST00000540596 141 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.43□□□□□ -2.48
SPG11Q96JI7 AC023824.3-201ENST00000569003 562 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-0.43□□□□□ -2.48
SPG11Q96JI7 C1DP2-201ENST00000418167 426 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 MTCO2P7-201ENST00000446518 666 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 C1DP4-201ENST00000455429 424 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 snoU109.2-201ENST00000459316 135 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.43□□□□□ -2.48
SPG11Q96JI7 RNU6-1183P-201ENST00000517054 60 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.43□□□□□ -2.48
SPG11Q96JI7 AC090049.2-201ENST00000550377 109 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
SPG11Q96JI7 SUB1P2-201ENST00000556401 297 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 MTND1P15-201ENST00000579262 949 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 AC063944.3-201ENST00000609969 533 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 uc_338.28-201ENST00000612082 187 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 AC024940.5-201ENST00000622889 474 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 MTND1P37-201ENST00000636562 264 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 MTND5P33-201ENST00000571250 1450 ntBASIC-0.43□□□□□ -2.48
SPG11Q96JI7 FCF1P10-201ENST00000407590 479 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 MTCYBP10-201ENST00000424905 650 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 MTATP6P16-201ENST00000434543 526 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-0.44□□□□□ -2.48
SPG11Q96JI7 AL160314.1-201ENST00000490836 438 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 AC025459.1-201ENST00000504072 156 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 AC097473.1-201ENST00000508142 408 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 RNU6-897P-201ENST00000517135 105 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 AC010376.1-201ENST00000522101 334 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 AP002001.1-203ENST00000534002 267 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 MIR4742-201ENST00000581069 85 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 AC022022.2-201ENST00000602989 360 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 AC011921.3-201ENST00000605540 361 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 AC010133.1-201ENST00000615809 842 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 AC073968.1-201ENST00000618594 637 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC-0.44□□□□□ -2.48
SPG11Q96JI7 DLEU2_6.3-201ENST00000340052 136 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 SNORA2B-201ENST00000384583 137 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 MIR29B2-201ENST00000385055 81 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 RNA5SP323-201ENST00000391094 133 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.44□□□□□ -2.48
SPG11Q96JI7 AL353997.1-201ENST00000432936 108 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 MTCO1P19-201ENST00000443487 500 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 AC007215.1-201ENST00000464893 276 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 AC114755.3-201ENST00000481111 251 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.44□□□□□ -2.48
SPG11Q96JI7 SNORD111.1-201ENST00000516421 86 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.44□□□□□ -2.48
SPG11Q96JI7 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC-0.44□□□□□ -2.48
SPG11Q96JI7 TMF1P1-201ENST00000576058 373 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 AC004223.2-201ENST00000590309 544 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 DLEU2_6.2-201ENST00000620994 136 ntBASIC-0.44□□□□□ -2.48
SPG11Q96JI7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.44□□□□□ -2.48
SPG11Q96JI7 SNORD113.3-201ENST00000364630 78 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 RNU6-815P-201ENST00000384080 113 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 RNU6-679P-201ENST00000391003 106 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 ZNF885P-201ENST00000420174 1098 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 AC068135.1-201ENST00000446164 246 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC-0.45□□□□□ -2.48
SPG11Q96JI7 AC012308.1-201ENST00000451232 178 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 AC022364.2-201ENST00000457963 554 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 AC008628.1-201ENST00000508663 265 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 RNU4-49P-201ENST00000516080 140 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 RN7SKP164-201ENST00000516138 266 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 RNA5SP94-201ENST00000516917 108 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.45□□□□□ -2.48
SPG11Q96JI7 AL670379.3-201ENST00000605040 251 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 AL603758.1-201ENST00000618654 241 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 AC119674.1-220ENST00000641502 1048 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 ENSAP3-201ENST00000312710 333 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 Y_RNA.548-201ENST00000384656 105 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 MTCO1P21-201ENST00000416634 589 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 AC006366.1-201ENST00000422002 759 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 MTCO3P29-201ENST00000432119 779 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 snoU13.30-201ENST00000458951 104 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 AC091021.1-201ENST00000468051 388 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.45□□□□□ -2.48
SPG11Q96JI7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.45□□□□□ -2.48
SPG11Q96JI7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.45□□□□□ -2.48
SPG11Q96JI7 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.45□□□□□ -2.48
SPG11Q96JI7 SNORD39.3-201ENST00000584451 71 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.45□□□□□ -2.48
SPG11Q96JI7 AC068790.2-201ENST00000602601 557 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 AC242628.1-201ENST00000606810 391 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 AL451064.1-201ENST00000607718 471 ntBASIC-0.45□□□□□ -2.48
SPG11Q96JI7 MIR8054-201ENST00000620877 86 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms