Protein–RNA interactions for Protein: Q8NHV9

RHOXF1, Rhox homeobox family member 1, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1Q8NHV9 AL590135.1-201ENST00000422215 156 ntBASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 AC019205.3-201ENST00000424573 156 ntBASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 HMGN2P19-201ENST00000425149 265 ntBASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 MTND4P28-201ENST00000426217 387 ntBASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 AC236972.2-201ENST00000434979 310 ntBASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 AC016700.2-201ENST00000446011 156 ntBASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 AC104564.1-201ENST00000493028 407 ntBASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 AC015911.1-201ENST00000495111 156 ntBASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 AC105758.1-201ENST00000506038 399 ntBASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 Y_RNA.661-201ENST00000516003 99 ntBASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 SCARNA3-201ENST00000517097 143 ntBASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 DEFB131C-201ENST00000528817 165 ntBASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 SUB1P3-201ENST00000564581 315 ntBASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 MIR3944-201ENST00000581277 108 ntBASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 PISRT1.1-201ENST00000616930 107 ntBASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 AC087588.2-201ENST00000617667 426 ntBASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 SCARNA4-201ENST00000629045 128 ntBASIC1.85□□□□□ -2.11
RHOXF1Q8NHV9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 RNU6-1210P-201ENST00000363775 107 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 RNU6-944P-201ENST00000364023 107 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 Y_RNA.405-201ENST00000383979 100 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 RNU6-968P-201ENST00000384076 107 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 Y_RNA.451-201ENST00000384200 100 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 RNU6-378P-201ENST00000384324 107 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 Y_RNA.524-201ENST00000384564 100 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 Y_RNA.561-201ENST00000384694 100 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 MIR128-1-201ENST00000384921 82 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 SNORA12.2-201ENST00000391040 156 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 SNORA12-201ENST00000391162 147 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 RNU6-1245P-201ENST00000411130 106 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 AC004866.1-201ENST00000411748 78 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 AC027124.2-201ENST00000428249 105 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 GPM6BP3-201ENST00000442797 145 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 AC087477.1-201ENST00000465747 340 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 AC114801.2-201ENST00000503825 781 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 AC016632.1-201ENST00000503994 196 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 RNA5SP356-201ENST00000515972 94 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 SNRPGP18-201ENST00000553000 214 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 MIR4273-201ENST00000582824 84 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 RPL30P11-203ENST00000598995 310 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 AL034555.1-201ENST00000604816 211 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 AC096772.1-201ENST00000609146 564 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 AC007792.1-201ENST00000623023 402 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.84□□□□□ -2.11
RHOXF1Q8NHV9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
RHOXF1Q8NHV9 MTND5P10-201ENST00000603719 1809 ntBASIC1.84□□□□□ -2.12
RHOXF1Q8NHV9 AC233981.2-201ENST00000611524 1614 ntBASIC1.84□□□□□ -2.12
RHOXF1Q8NHV9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 MTND5P6-201ENST00000422338 1798 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 AC092268.1-201ENST00000342691 405 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 RNU6-655P-201ENST00000362858 107 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 RNU6-486P-201ENST00000363116 107 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 Y_RNA.112-201ENST00000363250 102 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 Y_RNA.146-201ENST00000363549 102 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 RNU6-1274P-201ENST00000384557 107 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 SNORA48.2-201ENST00000390926 124 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 U6atac.2-201ENST00000408644 118 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 RNU2-48P-201ENST00000410694 191 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 AC068781.1-201ENST00000488231 618 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 RPL17P19-201ENST00000489069 552 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 AC140059.1-201ENST00000489238 361 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 RNA5SP112-201ENST00000515937 99 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 AC027288.2-201ENST00000553028 243 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 MIR5089-201ENST00000580047 84 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 AC105245.1-201ENST00000581934 244 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 MIR3171-201ENST00000584270 74 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 AL355802.3-201ENST00000607571 545 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 MIR1244-1-201ENST00000612829 85 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 AC005520.5-201ENST00000613926 164 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 AC007485.1-201ENST00000616755 206 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 MIR1244-3-201ENST00000635744 85 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 MIR1244-2-201ENST00000636449 85 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 MIR1244-4-202ENST00000636813 85 ntBASIC1.83□□□□□ -2.12
RHOXF1Q8NHV9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RHOXF1Q8NHV9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.82□□□□□ -2.12
RHOXF1Q8NHV9 RNU6-222P-201ENST00000362438 107 ntBASIC1.82□□□□□ -2.12
RHOXF1Q8NHV9 Y_RNA.148-201ENST00000363557 117 ntBASIC1.82□□□□□ -2.12
RHOXF1Q8NHV9 SNORD32B-201ENST00000364460 84 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms