Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 EIF4A1P12-201ENST00000551910 141 ntBASIC2.31□□□□□ -2.04
BEST3Q8N1M1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.31□□□□□ -2.04
BEST3Q8N1M1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.31□□□□□ -2.04
BEST3Q8N1M1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
BEST3Q8N1M1 ZNF271P-202ENST00000465539 1970 ntBASIC2.3□□□□□ -2.04
BEST3Q8N1M1 RNA5SP125-201ENST00000364843 120 ntBASIC2.3□□□□□ -2.04
BEST3Q8N1M1 RNU6-17P-201ENST00000384245 107 ntBASIC2.3□□□□□ -2.04
BEST3Q8N1M1 RNU6-18P-201ENST00000384527 107 ntBASIC2.3□□□□□ -2.04
BEST3Q8N1M1 Y_RNA.577-201ENST00000384794 101 ntBASIC2.3□□□□□ -2.04
BEST3Q8N1M1 SNORA46.1-201ENST00000391069 153 ntBASIC2.3□□□□□ -2.04
BEST3Q8N1M1 Y_RNA.597-201ENST00000410463 100 ntBASIC2.3□□□□□ -2.04
BEST3Q8N1M1 AC007098.1-201ENST00000420122 367 ntBASIC2.3□□□□□ -2.04
BEST3Q8N1M1 CBX3P6-201ENST00000430257 527 ntBASIC2.3□□□□□ -2.04
BEST3Q8N1M1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.3□□□□□ -2.04
BEST3Q8N1M1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.3□□□□□ -2.04
BEST3Q8N1M1 Y_RNA.706-201ENST00000516933 99 ntBASIC2.3□□□□□ -2.04
BEST3Q8N1M1 SNORA48.11-201ENST00000517015 89 ntBASIC2.3□□□□□ -2.04
BEST3Q8N1M1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.3□□□□□ -2.04
BEST3Q8N1M1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.3□□□□□ -2.04
BEST3Q8N1M1 MIR3945-201ENST00000581853 98 ntBASIC2.3□□□□□ -2.04
BEST3Q8N1M1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
BEST3Q8N1M1 AL355297.2-201ENST00000604792 129 ntBASIC2.3□□□□□ -2.04
BEST3Q8N1M1 AC116312.1-201ENST00000606841 314 ntBASIC2.3□□□□□ -2.04
BEST3Q8N1M1 AL590808.1-201ENST00000618696 141 ntBASIC2.3□□□□□ -2.04
BEST3Q8N1M1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.3□□□□□ -2.04
BEST3Q8N1M1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.29□□□□□ -2.04
BEST3Q8N1M1 RNA5SP289-201ENST00000362332 137 ntBASIC2.29□□□□□ -2.04
BEST3Q8N1M1 RNU6-137P-201ENST00000363680 108 ntBASIC2.29□□□□□ -2.04
BEST3Q8N1M1 Y_RNA.197-201ENST00000364004 102 ntBASIC2.29□□□□□ -2.04
BEST3Q8N1M1 RNU6-99P-201ENST00000364721 107 ntBASIC2.29□□□□□ -2.04
BEST3Q8N1M1 U8.10-201ENST00000384260 133 ntBASIC2.29□□□□□ -2.04
BEST3Q8N1M1 MIR559-201ENST00000385188 96 ntBASIC2.29□□□□□ -2.04
BEST3Q8N1M1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
BEST3Q8N1M1 OOSP1P1-201ENST00000423265 274 ntBASIC2.29□□□□□ -2.04
BEST3Q8N1M1 MTCO3P29-201ENST00000432119 779 ntBASIC2.29□□□□□ -2.04
BEST3Q8N1M1 UBE2V1P7-201ENST00000446395 340 ntBASIC2.29□□□□□ -2.04
BEST3Q8N1M1 MIR2053-201ENST00000459295 91 ntBASIC2.29□□□□□ -2.04
BEST3Q8N1M1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.29□□□□□ -2.04
BEST3Q8N1M1 RNU6-120P-201ENST00000516077 103 ntBASIC2.29□□□□□ -2.04
BEST3Q8N1M1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.29□□□□□ -2.04
BEST3Q8N1M1 AC018630.3-201ENST00000542637 96 ntBASIC2.29□□□□□ -2.04
BEST3Q8N1M1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.29□□□□□ -2.04
BEST3Q8N1M1 AC004584.2-201ENST00000570407 410 ntBASIC2.29□□□□□ -2.04
BEST3Q8N1M1 MIR5092-201ENST00000583139 88 ntBASIC2.29□□□□□ -2.04
BEST3Q8N1M1 AL080274.1-201ENST00000605565 220 ntBASIC2.29□□□□□ -2.04
BEST3Q8N1M1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.29□□□□□ -2.04
BEST3Q8N1M1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.29□□□□□ -2.04
BEST3Q8N1M1 AC090971.5-201ENST00000621102 293 ntBASIC2.29□□□□□ -2.04
BEST3Q8N1M1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
BEST3Q8N1M1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
BEST3Q8N1M1 AC135776.4-201ENST00000624300 1904 ntBASIC2.29□□□□□ -2.04
BEST3Q8N1M1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.28□□□□□ -2.04
BEST3Q8N1M1 SNORD32B-201ENST00000364460 84 ntBASIC2.28□□□□□ -2.04
BEST3Q8N1M1 MIR561-201ENST00000385216 97 ntBASIC2.28□□□□□ -2.04
BEST3Q8N1M1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.28□□□□□ -2.04
BEST3Q8N1M1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.28□□□□□ -2.04
BEST3Q8N1M1 AC099799.1-201ENST00000439809 192 ntBASIC2.28□□□□□ -2.04
BEST3Q8N1M1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.28□□□□□ -2.04
BEST3Q8N1M1 AC007215.1-201ENST00000464893 276 ntBASIC2.28□□□□□ -2.04
BEST3Q8N1M1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.28□□□□□ -2.04
BEST3Q8N1M1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.28□□□□□ -2.04
BEST3Q8N1M1 RNU6-976P-201ENST00000516086 111 ntBASIC2.28□□□□□ -2.04
BEST3Q8N1M1 RNA5SP54-201ENST00000516951 92 ntBASIC2.28□□□□□ -2.04
BEST3Q8N1M1 HSPE1P18-201ENST00000517602 280 ntBASIC2.28□□□□□ -2.04
BEST3Q8N1M1 AP002770.2-201ENST00000543613 532 ntBASIC2.28□□□□□ -2.04
BEST3Q8N1M1 SNORD53-201ENST00000579969 78 ntBASIC2.28□□□□□ -2.04
BEST3Q8N1M1 AL355802.3-201ENST00000607571 545 ntBASIC2.28□□□□□ -2.04
BEST3Q8N1M1 Z82209.1-201ENST00000422141 2135 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
BEST3Q8N1M1 RNU6-1115P-201ENST00000362490 106 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 SNORD115-8-201ENST00000363856 82 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 RNU6-944P-201ENST00000364023 107 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 RNU4-76P-201ENST00000364509 141 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 SNORD115-38-201ENST00000365037 82 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 SNORD42.2-201ENST00000365570 69 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 Y_RNA.463-201ENST00000384271 102 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 RNU6-541P-201ENST00000384709 110 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 MIR625-201ENST00000385047 85 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 MIR190B-201ENST00000401119 79 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 AL359511.1-201ENST00000402970 211 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 MIR1294-201ENST00000408503 142 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 RNU6-1156P-201ENST00000410365 100 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 AC092423.1-201ENST00000430165 186 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 TOMM22P6-201ENST00000465035 409 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 AC132942.1-201ENST00000486753 483 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.27□□□□□ -2.05
BEST3Q8N1M1 RNA5SP24-201ENST00000516478 95 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 RNU6-699P-201ENST00000517081 110 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.27□□□□□ -2.05
BEST3Q8N1M1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.27□□□□□ -2.05
BEST3Q8N1M1 RPL17P51-201ENST00000605218 238 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 U4atac.1-201ENST00000618345 95 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 AC064859.1-201ENST00000624741 174 ntBASIC2.27□□□□□ -2.05
BEST3Q8N1M1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
BEST3Q8N1M1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.26□□□□□ -2.05
BEST3Q8N1M1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
BEST3Q8N1M1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
BEST3Q8N1M1 Y_RNA.319-201ENST00000365138 92 ntBASIC2.26□□□□□ -2.05
BEST3Q8N1M1 Y_RNA.395-201ENST00000383945 109 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 282.9 ms