Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MIR517A-201ENST00000385001 87 ntBASIC1.87□□□□□ -2.11
CCDC71Q8IV32 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC71Q8IV32 SUMO2P12-201ENST00000405924 140 ntBASIC1.87□□□□□ -2.11
CCDC71Q8IV32 RNU2-32P-201ENST00000411193 191 ntBASIC1.87□□□□□ -2.11
CCDC71Q8IV32 AL139156.1-201ENST00000412785 841 ntBASIC1.87□□□□□ -2.11
CCDC71Q8IV32 AL139396.1-201ENST00000421137 167 ntBASIC1.87□□□□□ -2.11
CCDC71Q8IV32 AC012306.1-201ENST00000423267 114 ntBASIC1.87□□□□□ -2.11
CCDC71Q8IV32 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC71Q8IV32 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.87□□□□□ -2.11
CCDC71Q8IV32 AL603825.1-201ENST00000438481 80 ntBASIC1.87□□□□□ -2.11
CCDC71Q8IV32 HMGB1P18-201ENST00000438801 619 ntBASIC1.87□□□□□ -2.11
CCDC71Q8IV32 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.87□□□□□ -2.11
CCDC71Q8IV32 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC71Q8IV32 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC71Q8IV32 RNU6-991P-201ENST00000516168 107 ntBASIC1.87□□□□□ -2.11
CCDC71Q8IV32 RNU6-295P-201ENST00000516901 104 ntBASIC1.87□□□□□ -2.11
CCDC71Q8IV32 RNU6-273P-201ENST00000516937 96 ntBASIC1.87□□□□□ -2.11
CCDC71Q8IV32 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC71Q8IV32 AC034114.1-201ENST00000520293 285 ntBASIC1.87□□□□□ -2.11
CCDC71Q8IV32 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC71Q8IV32 AP005639.2-201ENST00000527592 928 ntBASIC1.87□□□□□ -2.11
CCDC71Q8IV32 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC71Q8IV32 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC71Q8IV32 POLR3GP2-201ENST00000588366 668 ntBASIC1.87□□□□□ -2.11
CCDC71Q8IV32 PCGEM1.1-201ENST00000613431 131 ntBASIC1.87□□□□□ -2.11
CCDC71Q8IV32 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC71Q8IV32 AL161423.1-201ENST00000613700 262 ntBASIC1.87□□□□□ -2.11
CCDC71Q8IV32 SDR42E1P4-201ENST00000620894 481 ntBASIC1.87□□□□□ -2.11
CCDC71Q8IV32 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC71Q8IV32 AC099654.14-201ENST00000638599 341 ntBASIC1.87□□□□□ -2.11
CCDC71Q8IV32 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
CCDC71Q8IV32 ZNF72P-201ENST00000425869 1908 ntBASIC1.86□□□□□ -2.11
CCDC71Q8IV32 RNU5B-2P-201ENST00000363036 113 ntBASIC1.86□□□□□ -2.11
CCDC71Q8IV32 SNORA29-201ENST00000384183 140 ntBASIC1.86□□□□□ -2.11
CCDC71Q8IV32 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CCDC71Q8IV32 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CCDC71Q8IV32 RNU6-876P-201ENST00000391295 104 ntBASIC1.86□□□□□ -2.11
CCDC71Q8IV32 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.86□□□□□ -2.11
CCDC71Q8IV32 RPL21P111-201ENST00000418453 477 ntBASIC1.86□□□□□ -2.11
CCDC71Q8IV32 AL445646.1-201ENST00000431784 216 ntBASIC1.86□□□□□ -2.11
CCDC71Q8IV32 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC71Q8IV32 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC71Q8IV32 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC71Q8IV32 PPP1R2P5-201ENST00000457256 603 ntBASIC1.86□□□□□ -2.11
CCDC71Q8IV32 AC021146.2-201ENST00000504736 556 ntBASIC1.86□□□□□ -2.11
CCDC71Q8IV32 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC71Q8IV32 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.86□□□□□ -2.11
CCDC71Q8IV32 AL096840.1-201ENST00000603287 93 ntBASIC1.86□□□□□ -2.11
CCDC71Q8IV32 Y_RNA.783-201ENST00000613546 102 ntBASIC1.86□□□□□ -2.11
CCDC71Q8IV32 AC091932.3-201ENST00000624223 323 ntBASIC1.86□□□□□ -2.11
CCDC71Q8IV32 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC71Q8IV32 RNU6-845P-201ENST00000362578 103 ntBASIC1.85□□□□□ -2.11
CCDC71Q8IV32 RNU6-1159P-201ENST00000362933 107 ntBASIC1.85□□□□□ -2.11
CCDC71Q8IV32 SNORD50.1-201ENST00000362987 71 ntBASIC1.85□□□□□ -2.11
CCDC71Q8IV32 Y_RNA.166-201ENST00000363730 102 ntBASIC1.85□□□□□ -2.11
CCDC71Q8IV32 RNU6-596P-201ENST00000365395 98 ntBASIC1.85□□□□□ -2.11
CCDC71Q8IV32 MIR1294-201ENST00000408503 142 ntBASIC1.85□□□□□ -2.11
CCDC71Q8IV32 AC138393.2-201ENST00000414742 246 ntBASIC1.85□□□□□ -2.11
CCDC71Q8IV32 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC71Q8IV32 AC132942.1-201ENST00000486753 483 ntBASIC1.85□□□□□ -2.11
CCDC71Q8IV32 MTND5P5-201ENST00000503764 376 ntBASIC1.85□□□□□ -2.11
CCDC71Q8IV32 ACA59.1-201ENST00000515966 143 ntBASIC1.85□□□□□ -2.11
CCDC71Q8IV32 Y_RNA.682-201ENST00000516457 100 ntBASIC1.85□□□□□ -2.11
CCDC71Q8IV32 RNU6-667P-201ENST00000517186 102 ntBASIC1.85□□□□□ -2.11
CCDC71Q8IV32 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC71Q8IV32 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC71Q8IV32 MIR4790-201ENST00000577799 79 ntBASIC1.85□□□□□ -2.11
CCDC71Q8IV32 AC011494.1-201ENST00000596454 237 ntBASIC1.85□□□□□ -2.11
CCDC71Q8IV32 RBM11P1-201ENST00000604951 799 ntBASIC1.85□□□□□ -2.11
CCDC71Q8IV32 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.85□□□□□ -2.11
CCDC71Q8IV32 AC022306.2-201ENST00000617563 647 ntBASIC1.85□□□□□ -2.11
CCDC71Q8IV32 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.85□□□□□ -2.11
CCDC71Q8IV32 AL133216.2-202ENST00000634512 349 ntBASIC1.85□□□□□ -2.11
CCDC71Q8IV32 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC71Q8IV32 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CCDC71Q8IV32 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
CCDC71Q8IV32 U3.9-201ENST00000363823 204 ntBASIC1.84□□□□□ -2.11
CCDC71Q8IV32 RNU6-968P-201ENST00000384076 107 ntBASIC1.84□□□□□ -2.11
CCDC71Q8IV32 U8.13-201ENST00000390842 128 ntBASIC1.84□□□□□ -2.11
CCDC71Q8IV32 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.84□□□□□ -2.11
CCDC71Q8IV32 MIR548K-201ENST00000408406 116 ntBASIC1.84□□□□□ -2.11
CCDC71Q8IV32 RNA5SP489-201ENST00000410986 109 ntBASIC1.84□□□□□ -2.11
CCDC71Q8IV32 RPS26P42-201ENST00000413485 326 ntBASIC1.84□□□□□ -2.11
CCDC71Q8IV32 EIF4EP2-201ENST00000422816 654 ntBASIC1.84□□□□□ -2.11
CCDC71Q8IV32 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC71Q8IV32 AC027124.2-201ENST00000428249 105 ntBASIC1.84□□□□□ -2.11
CCDC71Q8IV32 AC079354.2-201ENST00000453523 154 ntBASIC1.84□□□□□ -2.11
CCDC71Q8IV32 PMCHL2-203ENST00000457791 237 ntBASIC1.84□□□□□ -2.11
CCDC71Q8IV32 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC71Q8IV32 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC71Q8IV32 RNU2-44P-201ENST00000516795 194 ntBASIC1.84□□□□□ -2.11
CCDC71Q8IV32 RNA5SP137-201ENST00000516833 135 ntBASIC1.84□□□□□ -2.11
CCDC71Q8IV32 RNU1-54P-201ENST00000517181 120 ntBASIC1.84□□□□□ -2.11
CCDC71Q8IV32 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC71Q8IV32 MRPS36P4-201ENST00000534436 298 ntBASIC1.84□□□□□ -2.11
CCDC71Q8IV32 EIF4A1P12-201ENST00000551910 141 ntBASIC1.84□□□□□ -2.11
CCDC71Q8IV32 MIR3126-201ENST00000577443 74 ntBASIC1.84□□□□□ -2.11
CCDC71Q8IV32 MIR5089-201ENST00000580047 84 ntBASIC1.84□□□□□ -2.11
CCDC71Q8IV32 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC71Q8IV32 SNRPGP17-201ENST00000603780 214 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms