Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 RNU6-740P-201ENST00000364734 105 ntBASIC3.41□□□□□ -1.86
E4F1Q66K89 Y_RNA.383-201ENST00000383855 97 ntBASIC3.41□□□□□ -1.86
E4F1Q66K89 SNORA18.3-201ENST00000384122 132 ntBASIC3.41□□□□□ -1.86
E4F1Q66K89 Y_RNA.446-201ENST00000384178 104 ntBASIC3.41□□□□□ -1.86
E4F1Q66K89 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
E4F1Q66K89 AL603908.1-201ENST00000406098 201 ntBASIC3.41□□□□□ -1.86
E4F1Q66K89 AL139156.1-201ENST00000412785 841 ntBASIC3.41□□□□□ -1.86
E4F1Q66K89 RAB28P5-201ENST00000427490 651 ntBASIC3.41□□□□□ -1.86
E4F1Q66K89 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.41□□□□□ -1.86
E4F1Q66K89 snoU13.14-201ENST00000459372 104 ntBASIC3.41□□□□□ -1.86
E4F1Q66K89 AC145146.1-201ENST00000496370 254 ntBASIC3.41□□□□□ -1.86
E4F1Q66K89 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.41□□□□□ -1.86
E4F1Q66K89 AC074133.1-201ENST00000515696 183 ntBASIC3.41□□□□□ -1.86
E4F1Q66K89 RNA5SP76-201ENST00000516277 87 ntBASIC3.41□□□□□ -1.86
E4F1Q66K89 Y_RNA.700-201ENST00000516806 100 ntBASIC3.41□□□□□ -1.86
E4F1Q66K89 AC023632.4-201ENST00000517783 191 ntBASIC3.41□□□□□ -1.86
E4F1Q66K89 CYCSP23-201ENST00000519781 313 ntBASIC3.41□□□□□ -1.86
E4F1Q66K89 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.41□□□□□ -1.86
E4F1Q66K89 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.41□□□□□ -1.86
E4F1Q66K89 AC055872.1-201ENST00000570978 278 ntBASIC3.41□□□□□ -1.86
E4F1Q66K89 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.41□□□□□ -1.86
E4F1Q66K89 PCGEM1.1-201ENST00000613431 131 ntBASIC3.41□□□□□ -1.86
E4F1Q66K89 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
E4F1Q66K89 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.41□□□□□ -1.86
E4F1Q66K89 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
E4F1Q66K89 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.4□□□□□ -1.86
E4F1Q66K89 snoU2_19.1-201ENST00000362361 80 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 RNU4-15P-201ENST00000362613 141 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 Y_RNA.76-201ENST00000362931 109 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 RNU6-1210P-201ENST00000363775 107 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 Y_RNA.199-201ENST00000364014 102 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 RNU1-57P-201ENST00000384491 166 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 MIR554-201ENST00000384874 96 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 MIR134-201ENST00000385258 73 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 RNA5SP354-201ENST00000391247 136 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 AL365496.1-201ENST00000426885 215 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 AC027124.2-201ENST00000428249 105 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 Z98742.2-201ENST00000431564 187 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 SUMO1P3-201ENST00000439961 304 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 Z75741.1-201ENST00000446793 314 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 NDUFB4P10-201ENST00000452541 359 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 AL138752.1-201ENST00000452964 351 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 AC005042.3-201ENST00000453230 174 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 RPL23AP70-201ENST00000483361 460 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 Y_RNA.679-201ENST00000516416 91 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.4□□□□□ -1.87
E4F1Q66K89 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.4□□□□□ -1.87
E4F1Q66K89 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
E4F1Q66K89 AL049781.1-201ENST00000623195 3585 ntBASIC3.39□□□□□ -1.87
E4F1Q66K89 MIR410-201ENST00000362222 80 ntBASIC3.39□□□□□ -1.87
E4F1Q66K89 Y_RNA.418-201ENST00000384029 102 ntBASIC3.39□□□□□ -1.87
E4F1Q66K89 AL357075.1-201ENST00000404107 726 ntBASIC3.39□□□□□ -1.87
E4F1Q66K89 RNA5SP201-201ENST00000410316 124 ntBASIC3.39□□□□□ -1.87
E4F1Q66K89 RPL19P1-201ENST00000411635 428 ntBASIC3.39□□□□□ -1.87
E4F1Q66K89 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.39□□□□□ -1.87
E4F1Q66K89 BMS1P22-201ENST00000414726 313 ntBASIC3.39□□□□□ -1.87
E4F1Q66K89 RPS29P6-201ENST00000438196 145 ntBASIC3.39□□□□□ -1.87
E4F1Q66K89 AL121594.1-201ENST00000475906 575 ntBASIC3.39□□□□□ -1.87
E4F1Q66K89 RNU6-107P-201ENST00000516643 102 ntBASIC3.39□□□□□ -1.87
E4F1Q66K89 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.39□□□□□ -1.87
E4F1Q66K89 RPL21P9-201ENST00000556149 474 ntBASIC3.39□□□□□ -1.87
E4F1Q66K89 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.39□□□□□ -1.87
E4F1Q66K89 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.39□□□□□ -1.87
E4F1Q66K89 AL162424.1-201ENST00000602325 221 ntBASIC3.39□□□□□ -1.87
E4F1Q66K89 AC004792.1-201ENST00000614523 137 ntBASIC3.39□□□□□ -1.87
E4F1Q66K89 AC004467.1-201ENST00000615678 330 ntBASIC3.39□□□□□ -1.87
E4F1Q66K89 AC091932.3-201ENST00000624223 323 ntBASIC3.39□□□□□ -1.87
E4F1Q66K89 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
E4F1Q66K89 Z83843.1-201ENST00000604070 3685 ntBASIC3.39□□□□□ -1.87
E4F1Q66K89 RNU1-62P-201ENST00000362599 164 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 U3.9-201ENST00000363823 204 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
E4F1Q66K89 MIR591-201ENST00000385290 95 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
E4F1Q66K89 Y_RNA.590-201ENST00000410140 107 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 Y_RNA.793-201ENST00000411222 111 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 ELOCP21-201ENST00000412558 336 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 AL353705.1-201ENST00000433468 480 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 MTCO1P5-201ENST00000433573 344 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.38□□□□□ -1.87
E4F1Q66K89 RN7SL20P-201ENST00000488827 297 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 RPS27P26-201ENST00000494583 239 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 AC091959.1-201ENST00000495857 238 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 HSPE1P18-201ENST00000517602 280 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.38□□□□□ -1.87
E4F1Q66K89 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.38□□□□□ -1.87
E4F1Q66K89 EIF4A1P12-201ENST00000551910 141 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 AC027176.1-201ENST00000560204 514 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.38□□□□□ -1.87
E4F1Q66K89 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.38□□□□□ -1.87
E4F1Q66K89 MIR4474-201ENST00000579189 78 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 AC011471.1-201ENST00000585766 187 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 AC022441.3-201ENST00000605737 136 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 AL365434.2-201ENST00000607979 234 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 MIR6798-201ENST00000612887 67 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 uc_338.14-201ENST00000613162 166 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
E4F1Q66K89 AL109809.4-201ENST00000603520 2185 ntBASIC3.38□□□□□ -1.87
E4F1Q66K89 AC092593.1-201ENST00000515413 1815 ntBASIC3.37□□□□□ -1.87
E4F1Q66K89 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms