Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 MIR8069-2-201ENST00000621412 86 ntBASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 AC002064.3-201ENST00000623448 346 ntBASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 AC139713.2-215ENST00000641428 5037 ntBASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 AC080128.1-201ENST00000474389 1917 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 AL356292.1-201ENST00000283110 373 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 MIR372-201ENST00000362225 67 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 RNU4-15P-201ENST00000362613 141 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 RNA5SP502-201ENST00000362694 119 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 SNORA63D-201ENST00000364359 132 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 RNU6-497P-201ENST00000365316 104 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 SNORA1.3-201ENST00000384676 136 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 MIR607-201ENST00000385241 96 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 MIR921-201ENST00000401133 56 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 RNA5SP146-201ENST00000410743 123 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 RPS26P2-201ENST00000440331 348 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 RN7SL812P-201ENST00000493791 279 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 RNA5SP309-201ENST00000516670 106 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 MIR2116-201ENST00000517221 80 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 AC021739.1-201ENST00000559631 174 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 AC106785.1-201ENST00000565935 262 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 MIR3129-201ENST00000581095 76 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 MIR6867-201ENST00000610636 67 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 Pinc.1-201ENST00000616452 154 ntBASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RNFT1Q5M7Z0 AL672296.1-201ENST00000427780 2158 ntBASIC3.9□□□□□ -1.78
RNFT1Q5M7Z0 AC103988.1-201ENST00000566382 2177 ntBASIC3.9□□□□□ -1.78
RNFT1Q5M7Z0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
RNFT1Q5M7Z0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RNFT1Q5M7Z0 SPRR2C-201ENST00000290702 219 ntBASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 RNU1-14P-201ENST00000362759 152 ntBASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 RNU6-1125P-201ENST00000363601 107 ntBASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 Y_RNA.203-201ENST00000364106 102 ntBASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 RNA5SP175-201ENST00000364275 119 ntBASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 RNU6-1305P-201ENST00000364353 104 ntBASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 RNU6-24P-201ENST00000384440 107 ntBASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 MIR562-201ENST00000384894 95 ntBASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 MIR759-201ENST00000390224 91 ntBASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 AL117342.1-201ENST00000404861 406 ntBASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 HMGN2P20-201ENST00000437531 273 ntBASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 AC018634.1-201ENST00000437554 401 ntBASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 snoU13.14-201ENST00000459372 104 ntBASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 RPL27AP5-201ENST00000469428 449 ntBASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 OR9P1P-201ENST00000496431 281 ntBASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 AC093663.1-201ENST00000497190 394 ntBASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 RNU2-13P-201ENST00000515909 113 ntBASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 AC007546.2-201ENST00000623996 360 ntBASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNFT1Q5M7Z0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 Y_RNA.290-201ENST00000364879 114 ntBASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 SNORA4.2-201ENST00000365313 147 ntBASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 Y_RNA.486-201ENST00000384398 107 ntBASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 AL356095.1-201ENST00000417217 199 ntBASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 AL445584.1-201ENST00000431451 330 ntBASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 AL353705.1-201ENST00000433468 480 ntBASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 AL356535.1-201ENST00000440335 398 ntBASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 AC010598.1-201ENST00000510378 103 ntBASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 SCARNA23-201ENST00000516060 130 ntBASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 RNU6-504P-201ENST00000516568 104 ntBASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 RNU7-149P-201ENST00000516739 59 ntBASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 RPL17P51-201ENST00000605218 238 ntBASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 MIR4662A-201ENST00000637499 67 ntBASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
RNFT1Q5M7Z0 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 687 ms