Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AP000560.1-201ENST00000624150 1937 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 RNU6-1010P-201ENST00000362757 107 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 Y_RNA.105-201ENST00000363182 111 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 RNU6-770P-201ENST00000363929 105 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 SNORD21-201ENST00000383953 95 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 SNORA29-201ENST00000384183 140 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 Y_RNA.471-201ENST00000384312 102 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 Y_RNA.489-201ENST00000384410 101 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 MIR628-201ENST00000385229 95 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 MIR1261-201ENST00000408659 82 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 Y_RNA.592-201ENST00000410274 109 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 RNU2-38P-201ENST00000410856 79 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 RNA5SP508-201ENST00000411327 119 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 AL358453.1-201ENST00000422522 250 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 ARL5AP4-201ENST00000430731 512 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 AL353705.4-201ENST00000449661 238 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 EEF1B2P7-201ENST00000451177 676 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 MTND1P19-201ENST00000511780 315 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 RNU6-570P-201ENST00000517051 105 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 MIR3128-201ENST00000581957 66 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 MIR4765-201ENST00000585007 77 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 RPS29P30-201ENST00000600975 111 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 AC096772.1-201ENST00000609146 564 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 Z75746.1-201ENST00000440243 2080 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 AC002543.1-201ENST00000299783 1954 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 AL359854.1-201ENST00000614203 1594 ntBASIC3.03□□□□□ -1.92
SLC44A4Q53GD3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.03□□□□□ -1.93
SLC44A4Q53GD3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 RNU4-50P-201ENST00000364361 141 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 RNU6-1286P-201ENST00000383871 107 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 Y_RNA.477-201ENST00000384352 108 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 MIR186-201ENST00000384988 86 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 RPL21P75-201ENST00000396599 483 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 RPL21P28-201ENST00000401418 483 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 RN7SKP61-201ENST00000410642 295 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 RNU6-130P-201ENST00000411112 103 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 AL590135.1-201ENST00000422215 156 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 AC019205.3-201ENST00000424573 156 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 AC016700.2-201ENST00000446011 156 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 FCF1P4-201ENST00000448326 183 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 AL513124.1-201ENST00000450410 614 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 snoU13.6-201ENST00000458785 104 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 RPL21P39-201ENST00000463605 483 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 RPS27AP9-201ENST00000477681 438 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 AC090525.1-201ENST00000479116 478 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 AC087190.1-201ENST00000484462 480 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 AC093591.1-201ENST00000491435 481 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 RPL21P16-201ENST00000495531 483 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 AC016632.1-201ENST00000503994 196 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 SNORA40.15-201ENST00000516884 107 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 AC109329.1-201ENST00000518744 317 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 AC079598.5-201ENST00000547460 117 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 AC010928.2-201ENST00000588017 287 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 AC023043.3-201ENST00000593113 385 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 AC073410.2-201ENST00000603240 332 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 AL078605.1-201ENST00000603529 500 ntBASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.02□□□□□ -1.93
SLC44A4Q53GD3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 AC096644.4-201ENST00000563417 2912 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 Y_RNA.276-201ENST00000364732 109 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 Y_RNA.350-201ENST00000365409 98 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 Y_RNA.405-201ENST00000383979 100 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 RNU6-1083P-201ENST00000384022 107 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 Y_RNA.451-201ENST00000384200 100 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 Y_RNA.524-201ENST00000384564 100 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 Y_RNA.561-201ENST00000384694 100 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 MIR196B-201ENST00000384852 84 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 MTCO3P19-201ENST00000415864 321 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 EIF1AXP1-201ENST00000419267 435 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 RPL23AP58-201ENST00000440453 469 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 RPS12P18-201ENST00000442381 270 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 LINC01399-202ENST00000458450 244 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 TRBV12-1-201ENST00000479785 344 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 AC098869.1-201ENST00000481627 292 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 RPL30P10-201ENST00000488148 337 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 RPL23AP75-201ENST00000491601 451 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 RNU5F-2P-201ENST00000516066 82 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 AL590705.4-201ENST00000532209 134 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 AL390123.1-201ENST00000603216 237 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 SNORD98-201ENST00000636377 67 ntBASIC3.01□□□□□ -1.93
SLC44A4Q53GD3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms