Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RNU6-1027P-201ENST00000383998 107 ntBASIC2.55□□□□□ -2
LTBQ06643 SNORA29-201ENST00000384183 140 ntBASIC2.55□□□□□ -2
LTBQ06643 RNU6-17P-201ENST00000384245 107 ntBASIC2.55□□□□□ -2
LTBQ06643 RNU6-18P-201ENST00000384527 107 ntBASIC2.55□□□□□ -2
LTBQ06643 MIR544A-201ENST00000384855 91 ntBASIC2.55□□□□□ -2
LTBQ06643 MIR32-201ENST00000384965 70 ntBASIC2.55□□□□□ -2
LTBQ06643 MIR487A-201ENST00000385009 80 ntBASIC2.55□□□□□ -2
LTBQ06643 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.55□□□□□ -2
LTBQ06643 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.55□□□□□ -2
LTBQ06643 RNU6-1245P-201ENST00000411130 106 ntBASIC2.55□□□□□ -2
LTBQ06643 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.55□□□□□ -2
LTBQ06643 RPL23AP95-201ENST00000426806 265 ntBASIC2.55□□□□□ -2
LTBQ06643 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.55□□□□□ -2
LTBQ06643 AL031183.1-201ENST00000457667 207 ntBASIC2.55□□□□□ -2
LTBQ06643 AP001025.1-201ENST00000486139 332 ntBASIC2.55□□□□□ -2
LTBQ06643 AC107222.1-201ENST00000510899 637 ntBASIC2.55□□□□□ -2
LTBQ06643 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.55□□□□□ -2
LTBQ06643 AC067942.3-201ENST00000512025 362 ntBASIC2.55□□□□□ -2
LTBQ06643 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.55□□□□□ -2
LTBQ06643 AC007536.1-201ENST00000533382 349 ntBASIC2.55□□□□□ -2
LTBQ06643 NACAP3-201ENST00000552100 481 ntBASIC2.55□□□□□ -2
LTBQ06643 AC090617.3-201ENST00000573670 475 ntBASIC2.55□□□□□ -2
LTBQ06643 MIR3128-201ENST00000581957 66 ntBASIC2.55□□□□□ -2
LTBQ06643 AC073410.2-201ENST00000603240 332 ntBASIC2.55□□□□□ -2
LTBQ06643 AL442067.1-201ENST00000613261 223 ntBASIC2.55□□□□□ -2
LTBQ06643 AC073308.1-201ENST00000623696 305 ntBASIC2.55□□□□□ -2
LTBQ06643 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.55□□□□□ -2
LTBQ06643 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.55□□□□□ -2
LTBQ06643 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
LTBQ06643 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.54□□□□□ -2
LTBQ06643 U8.2-201ENST00000363156 134 ntBASIC2.54□□□□□ -2
LTBQ06643 Y_RNA.350-201ENST00000365409 98 ntBASIC2.54□□□□□ -2
LTBQ06643 RNU6-198P-201ENST00000384258 104 ntBASIC2.54□□□□□ -2
LTBQ06643 Y_RNA.489-201ENST00000384410 101 ntBASIC2.54□□□□□ -2
LTBQ06643 RNY3P4-201ENST00000384428 101 ntBASIC2.54□□□□□ -2
LTBQ06643 RNU6-1026P-201ENST00000384465 108 ntBASIC2.54□□□□□ -2
LTBQ06643 RNU6-851P-201ENST00000384565 107 ntBASIC2.54□□□□□ -2
LTBQ06643 MIR215-201ENST00000384858 110 ntBASIC2.54□□□□□ -2
LTBQ06643 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.54□□□□□ -2
LTBQ06643 AC023141.4-201ENST00000412031 328 ntBASIC2.54□□□□□ -2
LTBQ06643 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.54□□□□□ -2
LTBQ06643 SNRPGP7-201ENST00000469016 106 ntBASIC2.54□□□□□ -2
LTBQ06643 AC003982.1-202ENST00000469928 248 ntBASIC2.54□□□□□ -2
LTBQ06643 MED28P2-201ENST00000475771 317 ntBASIC2.54□□□□□ -2
LTBQ06643 RPS27AP9-201ENST00000477681 438 ntBASIC2.54□□□□□ -2
LTBQ06643 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.54□□□□□ -2
LTBQ06643 AC083906.5-201ENST00000503722 328 ntBASIC2.54□□□□□ -2
LTBQ06643 AC025465.3-201ENST00000510570 311 ntBASIC2.54□□□□□ -2
LTBQ06643 AC107016.2-201ENST00000547968 190 ntBASIC2.54□□□□□ -2
LTBQ06643 AC006199.1-201ENST00000548728 219 ntBASIC2.54□□□□□ -2
LTBQ06643 AC079600.2-201ENST00000550076 130 ntBASIC2.54□□□□□ -2
LTBQ06643 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.54□□□□□ -2
LTBQ06643 AC007375.1-201ENST00000554513 578 ntBASIC2.54□□□□□ -2
LTBQ06643 AC136932.1-201ENST00000574771 208 ntBASIC2.54□□□□□ -2
LTBQ06643 AC009163.5-201ENST00000575421 637 ntBASIC2.54□□□□□ -2
LTBQ06643 AC019159.1-201ENST00000605094 187 ntBASIC2.54□□□□□ -2
LTBQ06643 AC096772.1-201ENST00000609146 564 ntBASIC2.54□□□□□ -2
LTBQ06643 ADAM3A-203ENST00000461344 2157 ntBASIC2.54□□□□□ -2
LTBQ06643 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.54□□□□□ -2
LTBQ06643 AC110491.1-201ENST00000562191 2010 ntBASIC2.54□□□□□ -2
LTBQ06643 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LTBQ06643 AC099654.7-201ENST00000635788 2127 ntBASIC2.53□□□□□ -2
LTBQ06643 Y_RNA.14-201ENST00000362415 103 ntBASIC2.53□□□□□ -2
LTBQ06643 RNU5B-2P-201ENST00000363036 113 ntBASIC2.53□□□□□ -2
LTBQ06643 Y_RNA.257-201ENST00000364596 102 ntBASIC2.53□□□□□ -2
LTBQ06643 SNORA18.3-201ENST00000384122 132 ntBASIC2.53□□□□□ -2
LTBQ06643 SNORA36A-201ENST00000384221 132 ntBASIC2.53□□□□□ -2
LTBQ06643 Y_RNA.477-201ENST00000384352 108 ntBASIC2.53□□□□□ -2
LTBQ06643 Y_RNA.518-201ENST00000384552 113 ntBASIC2.53□□□□□ -2
LTBQ06643 RNU6-847P-201ENST00000411115 108 ntBASIC2.53□□□□□ -2
LTBQ06643 EIF1AXP1-201ENST00000419267 435 ntBASIC2.53□□□□□ -2
LTBQ06643 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.53□□□□□ -2
LTBQ06643 AC087477.1-201ENST00000465747 340 ntBASIC2.53□□□□□ -2
LTBQ06643 RPS26P21-201ENST00000475397 348 ntBASIC2.53□□□□□ -2
LTBQ06643 RN7SL499P-201ENST00000481141 276 ntBASIC2.53□□□□□ -2
LTBQ06643 AC103975.1-201ENST00000482506 483 ntBASIC2.53□□□□□ -2
LTBQ06643 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.53□□□□□ -2
LTBQ06643 ACA59.2-201ENST00000517061 156 ntBASIC2.53□□□□□ -2
LTBQ06643 AC022868.1-201ENST00000517767 391 ntBASIC2.53□□□□□ -2
LTBQ06643 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.53□□□□□ -2
LTBQ06643 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.53□□□□□ -2
LTBQ06643 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.53□□□□□ -2
LTBQ06643 AC012433.1-201ENST00000588916 398 ntBASIC2.53□□□□□ -2
LTBQ06643 RMST_6.1-201ENST00000611980 203 ntBASIC2.53□□□□□ -2
LTBQ06643 AC011476.5-201ENST00000615594 130 ntBASIC2.53□□□□□ -2
LTBQ06643 AL450472.1-202ENST00000637286 180 ntBASIC2.53□□□□□ -2
LTBQ06643 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LTBQ06643 MTND5P6-201ENST00000422338 1798 ntBASIC2.52□□□□□ -2.01
LTBQ06643 RNU6-1301P-201ENST00000362724 104 ntBASIC2.52□□□□□ -2.01
LTBQ06643 Y_RNA.60-201ENST00000362831 98 ntBASIC2.52□□□□□ -2.01
LTBQ06643 Y_RNA.84-201ENST00000363011 104 ntBASIC2.52□□□□□ -2.01
LTBQ06643 snoU2_19.2-201ENST00000363024 80 ntBASIC2.52□□□□□ -2.01
LTBQ06643 Y_RNA.143-201ENST00000363520 106 ntBASIC2.52□□□□□ -2.01
LTBQ06643 SNORD115-32-201ENST00000364079 82 ntBASIC2.52□□□□□ -2.01
LTBQ06643 RNU6-318P-201ENST00000384283 103 ntBASIC2.52□□□□□ -2.01
LTBQ06643 RNU6-843P-201ENST00000384454 104 ntBASIC2.52□□□□□ -2.01
LTBQ06643 Y_RNA.504-201ENST00000384481 104 ntBASIC2.52□□□□□ -2.01
LTBQ06643 Y_RNA.562-201ENST00000384695 113 ntBASIC2.52□□□□□ -2.01
LTBQ06643 RNA5SP213-201ENST00000391031 106 ntBASIC2.52□□□□□ -2.01
LTBQ06643 RNU6-1093P-201ENST00000391194 107 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms