Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC006026.1-201ENST00000444025 1803 ntBASIC1.9□□□□□ -2.11
GABPAQ06546 Y_RNA.6-201ENST00000362350 114 ntBASIC1.9□□□□□ -2.11
GABPAQ06546 Y_RNA.123-201ENST00000363338 102 ntBASIC1.9□□□□□ -2.11
GABPAQ06546 RNU6-128P-201ENST00000383976 107 ntBASIC1.9□□□□□ -2.11
GABPAQ06546 SNORA40.19-201ENST00000390846 128 ntBASIC1.9□□□□□ -2.11
GABPAQ06546 SNORA26.3-201ENST00000391119 136 ntBASIC1.9□□□□□ -2.11
GABPAQ06546 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
GABPAQ06546 MIR208B-201ENST00000401172 77 ntBASIC1.9□□□□□ -2.11
GABPAQ06546 RNA5SP201-201ENST00000410316 124 ntBASIC1.9□□□□□ -2.11
GABPAQ06546 SRIP3-201ENST00000413200 219 ntBASIC1.9□□□□□ -2.11
GABPAQ06546 BX510359.4-201ENST00000423750 193 ntBASIC1.9□□□□□ -2.11
GABPAQ06546 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.9□□□□□ -2.11
GABPAQ06546 MTCO1P29-201ENST00000496868 288 ntBASIC1.9□□□□□ -2.11
GABPAQ06546 AC021146.2-201ENST00000504736 556 ntBASIC1.9□□□□□ -2.11
GABPAQ06546 AC096745.1-201ENST00000509945 370 ntBASIC1.9□□□□□ -2.11
GABPAQ06546 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.9□□□□□ -2.11
GABPAQ06546 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.9□□□□□ -2.11
GABPAQ06546 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.9□□□□□ -2.11
GABPAQ06546 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.9□□□□□ -2.11
GABPAQ06546 CYP4A27P-201ENST00000567218 190 ntBASIC1.9□□□□□ -2.11
GABPAQ06546 AL645939.4-201ENST00000604495 135 ntBASIC1.9□□□□□ -2.11
GABPAQ06546 SDR42E1P4-201ENST00000620894 481 ntBASIC1.9□□□□□ -2.11
GABPAQ06546 AC100810.6-201ENST00000638068 285 ntBASIC1.9□□□□□ -2.11
GABPAQ06546 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
GABPAQ06546 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
GABPAQ06546 CENPCP1-201ENST00000533085 2578 ntBASIC1.89□□□□□ -2.11
GABPAQ06546 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
GABPAQ06546 RNA5SP276-201ENST00000362580 94 ntBASIC1.89□□□□□ -2.11
GABPAQ06546 RNU6-234P-201ENST00000365229 104 ntBASIC1.89□□□□□ -2.11
GABPAQ06546 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.89□□□□□ -2.11
GABPAQ06546 Z82205.1-201ENST00000428456 297 ntBASIC1.89□□□□□ -2.11
GABPAQ06546 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
GABPAQ06546 HMGN2P18-201ENST00000450680 270 ntBASIC1.89□□□□□ -2.11
GABPAQ06546 AC132942.1-201ENST00000486753 483 ntBASIC1.89□□□□□ -2.11
GABPAQ06546 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.89□□□□□ -2.11
GABPAQ06546 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.89□□□□□ -2.11
GABPAQ06546 FAM206BP-201ENST00000510179 541 ntBASIC1.89□□□□□ -2.11
GABPAQ06546 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.89□□□□□ -2.11
GABPAQ06546 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.89□□□□□ -2.11
GABPAQ06546 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.89□□□□□ -2.11
GABPAQ06546 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.89□□□□□ -2.11
GABPAQ06546 AC008749.1-201ENST00000597650 306 ntBASIC1.89□□□□□ -2.11
GABPAQ06546 AC146944.4-201ENST00000602697 718 ntBASIC1.89□□□□□ -2.11
GABPAQ06546 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.89□□□□□ -2.11
GABPAQ06546 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
GABPAQ06546 AL359314.1-201ENST00000616913 261 ntBASIC1.89□□□□□ -2.11
GABPAQ06546 AC091932.3-201ENST00000624223 323 ntBASIC1.89□□□□□ -2.11
GABPAQ06546 MIR3688-2-201ENST00000636963 87 ntBASIC1.89□□□□□ -2.11
GABPAQ06546 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
GABPAQ06546 AC027514.1-201ENST00000588561 1603 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 Y_RNA.100-201ENST00000363141 102 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 RNU6-534P-201ENST00000364877 106 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 SNORD14D-201ENST00000384390 87 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 RNU6-790P-201ENST00000384479 105 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 MIR29C-201ENST00000385231 88 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 RNU11-3P-201ENST00000391111 133 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 RNU6-1093P-201ENST00000391194 107 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 AL357139.1-201ENST00000407792 426 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 RN7SKP101-201ENST00000411376 320 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 ZNF885P-201ENST00000420174 1098 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.88□□□□□ -2.11
GABPAQ06546 USP9YP28-201ENST00000435142 589 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.88□□□□□ -2.11
GABPAQ06546 snoU13.6-201ENST00000458785 104 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 RNU7-187P-201ENST00000458985 68 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 TRBVA-201ENST00000498804 316 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 MTCYBP18-201ENST00000501056 747 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 RNU6-256P-201ENST00000516747 97 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 RNA5SP490-201ENST00000517141 136 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 MTND1P5-201ENST00000517906 940 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 AP005660.1-201ENST00000522972 293 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 MRPS36P4-201ENST00000534436 298 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 EIF4A1P12-201ENST00000551910 141 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 CPDP1-201ENST00000579660 283 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 AC016727.1-205ENST00000605437 569 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 MIR3976-201ENST00000606807 139 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 AC090617.10-201ENST00000624308 134 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 MIR3662-201ENST00000637030 95 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 AC245060.5-201ENST00000610778 3293 ntBASIC1.88□□□□□ -2.11
GABPAQ06546 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
GABPAQ06546 MIR378A-201ENST00000362177 66 ntBASIC1.87□□□□□ -2.11
GABPAQ06546 Y_RNA.151-201ENST00000363566 112 ntBASIC1.87□□□□□ -2.11
GABPAQ06546 RNU6-60P-201ENST00000364792 103 ntBASIC1.87□□□□□ -2.11
GABPAQ06546 Y_RNA.414-201ENST00000384011 101 ntBASIC1.87□□□□□ -2.11
GABPAQ06546 SNORA29-201ENST00000384183 140 ntBASIC1.87□□□□□ -2.11
GABPAQ06546 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
GABPAQ06546 RNU2-41P-201ENST00000410991 178 ntBASIC1.87□□□□□ -2.11
GABPAQ06546 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.87□□□□□ -2.11
GABPAQ06546 MTCO3P18-201ENST00000440206 761 ntBASIC1.87□□□□□ -2.11
GABPAQ06546 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.87□□□□□ -2.11
GABPAQ06546 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.87□□□□□ -2.11
GABPAQ06546 MIR4287-201ENST00000579398 78 ntBASIC1.87□□□□□ -2.11
GABPAQ06546 MIR3672-201ENST00000584290 82 ntBASIC1.87□□□□□ -2.11
GABPAQ06546 snoU13.31-201ENST00000607291 104 ntBASIC1.87□□□□□ -2.11
GABPAQ06546 MIR8076-201ENST00000611401 83 ntBASIC1.87□□□□□ -2.11
GABPAQ06546 AL138726.1-201ENST00000614873 333 ntBASIC1.87□□□□□ -2.11
GABPAQ06546 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.87□□□□□ -2.11
GABPAQ06546 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
GABPAQ06546 ZNF702P-202ENST00000434269 1966 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms