Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.15□□□□□ -2.43
HSPG2P98160 AC007000.2-201ENST00000442564 487 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AL606517.1-201ENST00000446914 387 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AC020550.1-201ENST00000447385 163 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AC003071.1-201ENST00000451219 789 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 ART2BP-201ENST00000453501 499 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 MTND3P4-201ENST00000453537 303 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 RNU7-56P-201ENST00000458744 62 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 RNU7-94P-201ENST00000459576 63 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 RBBP4P6-201ENST00000508098 202 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AC009646.1-201ENST00000510455 318 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 RNU6-922P-201ENST00000516753 99 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 RNU6-714P-201ENST00000516963 103 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AC090502.2-201ENST00000549267 280 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.15□□□□□ -2.43
HSPG2P98160 AC004584.2-201ENST00000570407 410 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.15□□□□□ -2.43
HSPG2P98160 SNORD114-6-201ENST00000364393 72 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AL049545.1-201ENST00000401856 572 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AL133264.1-201ENST00000407157 562 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 RNU6-564P-201ENST00000410983 104 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.15□□□□□ -2.43
HSPG2P98160 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-0.15□□□□□ -2.43
HSPG2P98160 AC012308.1-201ENST00000451232 178 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.15□□□□□ -2.43
HSPG2P98160 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
HSPG2P98160 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.15□□□□□ -2.43
HSPG2P98160 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-0.15□□□□□ -2.43
HSPG2P98160 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.15□□□□□ -2.43
HSPG2P98160 MIR3612-201ENST00000579753 87 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AC092656.1-203ENST00000624134 423 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AL603865.2-201ENST00000401679 213 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AC027644.1-201ENST00000419595 298 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 MTCYBP10-201ENST00000424905 650 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 STAG3L5P-204ENST00000443759 179 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AC245047.8-201ENST00000456455 284 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.15□□□□□ -2.43
HSPG2P98160 AC027419.1-201ENST00000522976 328 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.15□□□□□ -2.43
HSPG2P98160 AC138869.1-201ENST00000568623 124 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AC098483.2-201ENST00000603158 454 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AC104695.3-201ENST00000604052 296 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AL136363.2-201ENST00000604173 851 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AL391903.3-201ENST00000612158 163 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 RNU6-1167P-201ENST00000363227 94 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 RNA5SP192-201ENST00000364404 120 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 MIR548B-201ENST00000385247 97 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.15□□□□□ -2.43
HSPG2P98160 MTCO2P5-201ENST00000422621 426 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AC002486.1-201ENST00000435098 391 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AC092170.1-201ENST00000440211 356 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 FABP5P15-201ENST00000453566 214 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.15□□□□□ -2.43
HSPG2P98160 RNU6-948P-201ENST00000516374 107 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 LARP7P2-201ENST00000575306 125 ntBASIC-0.15□□□□□ -2.43
HSPG2P98160 SNORA32.2-201ENST00000384049 122 ntBASIC-0.16□□□□□ -2.43
HSPG2P98160 FCF1P10-201ENST00000407590 479 ntBASIC-0.16□□□□□ -2.43
HSPG2P98160 RNU6-994P-201ENST00000410507 111 ntBASIC-0.16□□□□□ -2.43
HSPG2P98160 snoU109.2-201ENST00000459316 135 ntBASIC-0.16□□□□□ -2.43
HSPG2P98160 OR9P1P-201ENST00000496431 281 ntBASIC-0.16□□□□□ -2.43
HSPG2P98160 SNORA70.12-201ENST00000516084 153 ntBASIC-0.16□□□□□ -2.43
HSPG2P98160 RNU6-917P-201ENST00000516294 104 ntBASIC-0.16□□□□□ -2.43
HSPG2P98160 RNA5SP268-201ENST00000516828 124 ntBASIC-0.16□□□□□ -2.43
HSPG2P98160 BNIP3P6-201ENST00000549284 499 ntBASIC-0.16□□□□□ -2.43
HSPG2P98160 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.16□□□□□ -2.43
HSPG2P98160 MIR5697-201ENST00000578045 78 ntBASIC-0.16□□□□□ -2.43
HSPG2P98160 AC004223.2-201ENST00000590309 544 ntBASIC-0.16□□□□□ -2.43
HSPG2P98160 BNIP3P30-201ENST00000601184 574 ntBASIC-0.16□□□□□ -2.43
HSPG2P98160 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.16□□□□□ -2.43
HSPG2P98160 AC007014.2-201ENST00000615581 479 ntBASIC-0.16□□□□□ -2.43
HSPG2P98160 AC116165.2-201ENST00000616705 206 ntBASIC-0.16□□□□□ -2.43
HSPG2P98160 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.16□□□□□ -2.43
HSPG2P98160 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.16□□□□□ -2.43
HSPG2P98160 MIR1-1-201ENST00000362147 71 ntBASIC-0.16□□□□□ -2.44
HSPG2P98160 RNU6-512P-201ENST00000364438 103 ntBASIC-0.16□□□□□ -2.44
HSPG2P98160 RNU4-76P-201ENST00000364509 141 ntBASIC-0.16□□□□□ -2.44
HSPG2P98160 RNU6-487P-201ENST00000365430 104 ntBASIC-0.16□□□□□ -2.44
HSPG2P98160 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.16□□□□□ -2.44
HSPG2P98160 MIR196A2-201ENST00000385189 110 ntBASIC-0.16□□□□□ -2.44
HSPG2P98160 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
HSPG2P98160 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.16□□□□□ -2.44
HSPG2P98160 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.16□□□□□ -2.44
HSPG2P98160 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.16□□□□□ -2.44
HSPG2P98160 AC114981.1-201ENST00000503897 678 ntBASIC-0.16□□□□□ -2.44
HSPG2P98160 RNU6-947P-201ENST00000516264 106 ntBASIC-0.16□□□□□ -2.44
HSPG2P98160 MTND4LP26-201ENST00000518144 282 ntBASIC-0.16□□□□□ -2.44
HSPG2P98160 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.16□□□□□ -2.44
HSPG2P98160 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.16□□□□□ -2.44
HSPG2P98160 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.16□□□□□ -2.44
HSPG2P98160 MIR1273C-201ENST00000578669 77 ntBASIC-0.16□□□□□ -2.44
HSPG2P98160 AF038458.1-201ENST00000588406 262 ntBASIC-0.16□□□□□ -2.44
HSPG2P98160 AC005176.2-201ENST00000596933 147 ntBASIC-0.16□□□□□ -2.44
HSPG2P98160 AL592221.1-201ENST00000605266 382 ntBASIC-0.16□□□□□ -2.44
HSPG2P98160 RNU6-252P-201ENST00000363232 107 ntBASIC-0.16□□□□□ -2.44
HSPG2P98160 MIR421-201ENST00000365696 85 ntBASIC-0.16□□□□□ -2.44
HSPG2P98160 SNORD116-23-201ENST00000384645 92 ntBASIC-0.16□□□□□ -2.44
HSPG2P98160 AL356583.2-201ENST00000426536 280 ntBASIC-0.16□□□□□ -2.44
HSPG2P98160 LARP1BP3-201ENST00000437229 869 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms