Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.43□□□□□ -2.34
CCL20P78556 CETN4P-201ENST00000432407 469 ntBASIC0.43□□□□□ -2.34
CCL20P78556 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.43□□□□□ -2.34
CCL20P78556 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.43□□□□□ -2.34
CCL20P78556 BET1P1-201ENST00000482276 359 ntBASIC0.43□□□□□ -2.34
CCL20P78556 COX6CP6-201ENST00000490840 228 ntBASIC0.43□□□□□ -2.34
CCL20P78556 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.43□□□□□ -2.34
CCL20P78556 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.43□□□□□ -2.34
CCL20P78556 RNU6-947P-201ENST00000516264 106 ntBASIC0.43□□□□□ -2.34
CCL20P78556 Y_RNA.672-201ENST00000516289 104 ntBASIC0.43□□□□□ -2.34
CCL20P78556 RNA5SP255-201ENST00000516370 107 ntBASIC0.43□□□□□ -2.34
CCL20P78556 RN7SKP265-201ENST00000516448 223 ntBASIC0.43□□□□□ -2.34
CCL20P78556 RNU6-1069P-201ENST00000516612 133 ntBASIC0.43□□□□□ -2.34
CCL20P78556 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.43□□□□□ -2.34
CCL20P78556 PCMTD1P2-201ENST00000565017 355 ntBASIC0.43□□□□□ -2.34
CCL20P78556 MIR4509-3-201ENST00000578671 94 ntBASIC0.43□□□□□ -2.34
CCL20P78556 MIR4509-2-201ENST00000583920 94 ntBASIC0.43□□□□□ -2.34
CCL20P78556 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
CCL20P78556 MIR4509-1-201ENST00000618224 94 ntBASIC0.43□□□□□ -2.34
CCL20P78556 AC005562.2-201ENST00000618264 111 ntBASIC0.43□□□□□ -2.34
CCL20P78556 AC011155.2-201ENST00000623202 216 ntBASIC0.43□□□□□ -2.34
CCL20P78556 AL359697.1-201ENST00000624879 587 ntBASIC0.43□□□□□ -2.34
CCL20P78556 MTND5P17-201ENST00000418405 1603 ntBASIC0.42□□□□□ -2.34
CCL20P78556 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CCL20P78556 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.42□□□□□ -2.34
CCL20P78556 MTCO2P23-201ENST00000425216 680 ntBASIC0.42□□□□□ -2.34
CCL20P78556 AL365184.2-201ENST00000431139 435 ntBASIC0.42□□□□□ -2.34
CCL20P78556 RPS27P22-201ENST00000478056 241 ntBASIC0.42□□□□□ -2.34
CCL20P78556 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.42□□□□□ -2.34
CCL20P78556 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.42□□□□□ -2.34
CCL20P78556 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.42□□□□□ -2.34
CCL20P78556 AC005771.1-201ENST00000585581 349 ntBASIC0.42□□□□□ -2.34
CCL20P78556 AC146944.4-201ENST00000602697 718 ntBASIC0.42□□□□□ -2.34
CCL20P78556 AL390123.1-201ENST00000603216 237 ntBASIC0.42□□□□□ -2.34
CCL20P78556 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.42□□□□□ -2.34
CCL20P78556 AC009878.1-201ENST00000621819 340 ntBASIC0.42□□□□□ -2.34
CCL20P78556 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.42□□□□□ -2.34
CCL20P78556 AL078595.3-201ENST00000623815 1166 ntBASIC0.42□□□□□ -2.34
CCL20P78556 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
CCL20P78556 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
CCL20P78556 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
CCL20P78556 AC108667.1-201ENST00000428618 249 ntBASIC0.41□□□□□ -2.34
CCL20P78556 MTCO3P18-201ENST00000440206 761 ntBASIC0.41□□□□□ -2.34
CCL20P78556 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.41□□□□□ -2.34
CCL20P78556 AL162395.1-201ENST00000457882 422 ntBASIC0.41□□□□□ -2.34
CCL20P78556 snoU13.6-201ENST00000458785 104 ntBASIC0.41□□□□□ -2.34
CCL20P78556 MTCO2P6-201ENST00000463134 685 ntBASIC0.41□□□□□ -2.34
CCL20P78556 AC079382.1-201ENST00000493346 557 ntBASIC0.41□□□□□ -2.34
CCL20P78556 RNU6-113P-201ENST00000516653 101 ntBASIC0.41□□□□□ -2.34
CCL20P78556 AC004812.1-201ENST00000540773 146 ntBASIC0.41□□□□□ -2.34
CCL20P78556 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
CCL20P78556 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.41□□□□□ -2.34
CCL20P78556 MIR5006-201ENST00000583027 110 ntBASIC0.41□□□□□ -2.34
CCL20P78556 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.41□□□□□ -2.34
CCL20P78556 AC080078.2-201ENST00000603766 501 ntBASIC0.41□□□□□ -2.34
CCL20P78556 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.41□□□□□ -2.34
CCL20P78556 AL353765.1-201ENST00000605514 183 ntBASIC0.41□□□□□ -2.34
CCL20P78556 AC097065.2-201ENST00000608159 533 ntBASIC0.41□□□□□ -2.34
CCL20P78556 MIR8054-201ENST00000620877 86 ntBASIC0.41□□□□□ -2.34
CCL20P78556 SNORD114-27-201ENST00000363766 70 ntBASIC0.4□□□□□ -2.35
CCL20P78556 RNU4-76P-201ENST00000364509 141 ntBASIC0.4□□□□□ -2.35
CCL20P78556 RNU6-169P-201ENST00000365336 107 ntBASIC0.4□□□□□ -2.35
CCL20P78556 Y_RNA.367-201ENST00000365544 101 ntBASIC0.4□□□□□ -2.35
CCL20P78556 Y_RNA.480-201ENST00000384364 102 ntBASIC0.4□□□□□ -2.35
CCL20P78556 RNU6-110P-201ENST00000384508 104 ntBASIC0.4□□□□□ -2.35
CCL20P78556 NFU1P2-201ENST00000448700 469 ntBASIC0.4□□□□□ -2.35
CCL20P78556 RPS26P48-201ENST00000491713 339 ntBASIC0.4□□□□□ -2.35
CCL20P78556 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
CCL20P78556 HMGB1P29-201ENST00000505659 499 ntBASIC0.4□□□□□ -2.35
CCL20P78556 RNU4-54P-201ENST00000516428 129 ntBASIC0.4□□□□□ -2.35
CCL20P78556 RNA5SP121-201ENST00000516537 101 ntBASIC0.4□□□□□ -2.35
CCL20P78556 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
CCL20P78556 APOOP3-201ENST00000536787 586 ntBASIC0.4□□□□□ -2.35
CCL20P78556 AC011604.1-201ENST00000545978 196 ntBASIC0.4□□□□□ -2.35
CCL20P78556 AL391840.1-201ENST00000571144 367 ntBASIC0.4□□□□□ -2.35
CCL20P78556 MIR4999-201ENST00000585029 91 ntBASIC0.4□□□□□ -2.35
CCL20P78556 AC022217.4-201ENST00000604389 163 ntBASIC0.4□□□□□ -2.35
CCL20P78556 AL158050.2-201ENST00000605336 568 ntBASIC0.4□□□□□ -2.35
CCL20P78556 BNIP3P10-201ENST00000605360 577 ntBASIC0.4□□□□□ -2.35
CCL20P78556 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.4□□□□□ -2.35
CCL20P78556 AL513423.1-201ENST00000621695 132 ntBASIC0.4□□□□□ -2.35
CCL20P78556 AC022418.1-201ENST00000624118 445 ntBASIC0.4□□□□□ -2.35
CCL20P78556 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.4□□□□□ -2.35
CCL20P78556 AC099654.13-201ENST00000639774 207 ntBASIC0.4□□□□□ -2.35
CCL20P78556 MIR508-201ENST00000384857 115 ntBASIC0.39□□□□□ -2.35
CCL20P78556 SNORD41-201ENST00000386967 70 ntBASIC0.39□□□□□ -2.35
CCL20P78556 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.39□□□□□ -2.35
CCL20P78556 MIR1261-201ENST00000408659 82 ntBASIC0.39□□□□□ -2.35
CCL20P78556 RNU6-57P-201ENST00000411348 103 ntBASIC0.39□□□□□ -2.35
CCL20P78556 AP000275.1-201ENST00000411943 390 ntBASIC0.39□□□□□ -2.35
CCL20P78556 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.39□□□□□ -2.35
CCL20P78556 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.39□□□□□ -2.35
CCL20P78556 AC245047.3-201ENST00000429428 127 ntBASIC0.39□□□□□ -2.35
CCL20P78556 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.39□□□□□ -2.35
CCL20P78556 AC004386.2-201ENST00000441858 148 ntBASIC0.39□□□□□ -2.35
CCL20P78556 AC005840.1-201ENST00000498412 377 ntBASIC0.39□□□□□ -2.35
CCL20P78556 RNU1-142P-201ENST00000516682 145 ntBASIC0.39□□□□□ -2.35
CCL20P78556 AC112191.3-201ENST00000604371 277 ntBASIC0.39□□□□□ -2.35
CCL20P78556 AC002044.1-201ENST00000606707 158 ntBASIC0.39□□□□□ -2.35
CCL20P78556 TCL6_2.1-201ENST00000615162 119 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms