Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MIR593-201ENST00000384856 100 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 RNU6-952P-201ENST00000391164 108 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 MTCO2P31-201ENST00000402702 684 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 RNU6-77P-201ENST00000410554 91 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 MTCO2P5-201ENST00000422621 426 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 AC002429.1-201ENST00000437672 148 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.25□□□□□ -2.45
PRKDCP78527 RNU6-862P-201ENST00000362804 105 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 RNU6-622P-201ENST00000384272 103 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.25□□□□□ -2.45
PRKDCP78527 RPL23AP50-201ENST00000434149 455 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.25□□□□□ -2.45
PRKDCP78527 MTCO3P10-201ENST00000455912 772 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 AC114811.1-201ENST00000507207 168 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 RNU1-86P-201ENST00000516108 154 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 RNU1-107P-201ENST00000516617 154 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 AL356057.1-201ENST00000533798 831 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 AL035398.1-201ENST00000430869 322 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 RNU7-59P-201ENST00000459101 61 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 AC026782.1-201ENST00000512952 449 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 AL391840.1-201ENST00000571144 367 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 AC018889.1-201ENST00000605372 397 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 MIR6738-201ENST00000619620 64 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 MIR1-1-201ENST00000362147 71 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.26□□□□□ -2.45
PRKDCP78527 TPMTP2-201ENST00000414372 726 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.26□□□□□ -2.45
PRKDCP78527 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 snoU13.14-201ENST00000459372 104 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 AC022868.1-201ENST00000517767 391 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 AC091946.2-201ENST00000606105 291 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 AC106754.2-201ENST00000623006 233 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 SNORA42.1-201ENST00000363515 137 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 MIR520F-201ENST00000384824 87 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
PRKDCP78527 AL133264.1-201ENST00000407157 562 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 ART2BP-201ENST00000453501 499 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.26□□□□□ -2.45
PRKDCP78527 RNA5SP192-201ENST00000364404 120 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 AC007435.1-201ENST00000421086 415 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 STAG3L5P-204ENST00000443759 179 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.27□□□□□ -2.45
PRKDCP78527 AL606517.1-201ENST00000446914 387 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.27□□□□□ -2.45
PRKDCP78527 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 RNU6-948P-201ENST00000516374 107 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 MIR3115-201ENST00000577915 68 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 AL136363.2-201ENST00000604173 851 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 MTCO2P1-201ENST00000424648 477 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 AC104073.1-201ENST00000451988 151 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.27□□□□□ -2.45
PRKDCP78527 RPL39P38-201ENST00000467018 153 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 AC079382.1-201ENST00000493346 557 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.27□□□□□ -2.45
PRKDCP78527 RNU6-199P-201ENST00000362954 107 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 SNORA4.2-201ENST00000365313 147 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 RNU6V-201ENST00000384105 107 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 RNU6-432P-201ENST00000384196 109 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 RNU6-269P-201ENST00000391077 97 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 AC016831.2-201ENST00000417179 352 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 BTF3L4P3-201ENST00000418879 476 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 SCARNA18-201ENST00000459004 134 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 AP002453.2-201ENST00000533503 320 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 MIR4743-201ENST00000584576 69 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 AL353765.1-201ENST00000605514 183 ntBASIC-0.27□□□□□ -2.45
PRKDCP78527 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-0.27□□□□□ -2.45
PRKDCP78527 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
PRKDCP78527 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.27□□□□□ -2.45
PRKDCP78527 RNY4P27-201ENST00000363341 96 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 SNORD14C-201ENST00000365382 88 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 MTND2P21-201ENST00000436242 1042 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.28□□□□□ -2.45
PRKDCP78527 RNU6-123P-201ENST00000516163 102 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 AC023050.3-201ENST00000541142 333 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 BNIP3P6-201ENST00000549284 499 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 MIR4300-201ENST00000581016 96 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 AC116165.2-201ENST00000616705 206 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 SEPT14P17-201ENST00000617978 177 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 RNU6-296P-201ENST00000384608 107 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 MIR145-201ENST00000384967 88 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 AC013262.1-201ENST00000426710 252 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.28□□□□□ -2.45
PRKDCP78527 RBBP4P6-201ENST00000508098 202 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 AC023157.2-201ENST00000540596 141 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 RNU6-359P-201ENST00000365466 108 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 SNORA12-201ENST00000391162 147 ntBASIC-0.28□□□□□ -2.45
PRKDCP78527 MTCO3P29-201ENST00000432119 779 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms