Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AC011604.1-201ENST00000545978 196 ntBASIC0.6□□□□□ -2.31
SKP1P63208 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.6□□□□□ -2.31
SKP1P63208 MIR4753-201ENST00000585119 83 ntBASIC0.6□□□□□ -2.31
SKP1P63208 GHRLOS.1-201ENST00000610995 70 ntBASIC0.6□□□□□ -2.31
SKP1P63208 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.6□□□□□ -2.31
SKP1P63208 AL445984.1-201ENST00000637834 659 ntBASIC0.6□□□□□ -2.31
SKP1P63208 AC023934.1-201ENST00000574529 2389 ntBASIC0.59□□□□□ -2.31
SKP1P63208 RNU6-545P-201ENST00000362681 104 ntBASIC0.59□□□□□ -2.31
SKP1P63208 RNU6-42P-201ENST00000384165 107 ntBASIC0.59□□□□□ -2.31
SKP1P63208 Y_RNA.576-201ENST00000384781 102 ntBASIC0.59□□□□□ -2.31
SKP1P63208 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
SKP1P63208 RPS26P5-201ENST00000418544 335 ntBASIC0.59□□□□□ -2.31
SKP1P63208 HMGN2P34-201ENST00000437647 269 ntBASIC0.59□□□□□ -2.31
SKP1P63208 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.59□□□□□ -2.31
SKP1P63208 AC008628.2-201ENST00000502605 298 ntBASIC0.59□□□□□ -2.31
SKP1P63208 AC091435.1-201ENST00000505442 584 ntBASIC0.59□□□□□ -2.31
SKP1P63208 AC105758.1-201ENST00000506038 399 ntBASIC0.59□□□□□ -2.31
SKP1P63208 RNU6-948P-201ENST00000516374 107 ntBASIC0.59□□□□□ -2.31
SKP1P63208 AL137100.2-201ENST00000555786 315 ntBASIC0.59□□□□□ -2.31
SKP1P63208 TPRKBP2-201ENST00000565969 475 ntBASIC0.59□□□□□ -2.31
SKP1P63208 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.59□□□□□ -2.31
SKP1P63208 AC008250.2-201ENST00000615261 205 ntBASIC0.59□□□□□ -2.31
SKP1P63208 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
SKP1P63208 MIR6734-201ENST00000621166 68 ntBASIC0.59□□□□□ -2.31
SKP1P63208 SNORD3E-202ENST00000627253 216 ntBASIC0.59□□□□□ -2.31
SKP1P63208 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.58□□□□□ -2.32
SKP1P63208 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
SKP1P63208 SNORA33-201ENST00000363664 130 ntBASIC0.58□□□□□ -2.32
SKP1P63208 SNORA80D-201ENST00000384488 135 ntBASIC0.58□□□□□ -2.32
SKP1P63208 MIR942-201ENST00000401111 86 ntBASIC0.58□□□□□ -2.32
SKP1P63208 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
SKP1P63208 AL117339.3-201ENST00000418733 162 ntBASIC0.58□□□□□ -2.32
SKP1P63208 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.58□□□□□ -2.32
SKP1P63208 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.58□□□□□ -2.32
SKP1P63208 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.58□□□□□ -2.32
SKP1P63208 COX6CP6-201ENST00000490840 228 ntBASIC0.58□□□□□ -2.32
SKP1P63208 RNA5SP255-201ENST00000516370 107 ntBASIC0.58□□□□□ -2.32
SKP1P63208 MIR5695-201ENST00000579717 85 ntBASIC0.58□□□□□ -2.32
SKP1P63208 Z99289.3-201ENST00000605586 594 ntBASIC0.58□□□□□ -2.32
SKP1P63208 AC104465.1-201ENST00000611365 139 ntBASIC0.58□□□□□ -2.32
SKP1P63208 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
SKP1P63208 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.58□□□□□ -2.32
SKP1P63208 AC004808.1-201ENST00000627671 721 ntBASIC0.58□□□□□ -2.32
SKP1P63208 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
SKP1P63208 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
SKP1P63208 RNA5SP361-201ENST00000362686 118 ntBASIC0.57□□□□□ -2.32
SKP1P63208 MTCO3P18-201ENST00000440206 761 ntBASIC0.57□□□□□ -2.32
SKP1P63208 AC116562.3-201ENST00000506136 177 ntBASIC0.57□□□□□ -2.32
SKP1P63208 MTCO3P7-201ENST00000510008 774 ntBASIC0.57□□□□□ -2.32
SKP1P63208 AC068587.5-201ENST00000528506 175 ntBASIC0.57□□□□□ -2.32
SKP1P63208 APOOP3-201ENST00000536787 586 ntBASIC0.57□□□□□ -2.32
SKP1P63208 AC004812.1-201ENST00000540773 146 ntBASIC0.57□□□□□ -2.32
SKP1P63208 AC091489.2-201ENST00000566263 604 ntBASIC0.57□□□□□ -2.32
SKP1P63208 MIR4714-201ENST00000580728 77 ntBASIC0.57□□□□□ -2.32
SKP1P63208 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.57□□□□□ -2.32
SKP1P63208 AC104010.1-201ENST00000616889 150 ntBASIC0.57□□□□□ -2.32
SKP1P63208 AL031667.3-201ENST00000620124 655 ntBASIC0.57□□□□□ -2.32
SKP1P63208 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
SKP1P63208 RNU6-116P-201ENST00000384042 109 ntBASIC0.56□□□□□ -2.32
SKP1P63208 RNY1P14-201ENST00000384426 108 ntBASIC0.56□□□□□ -2.32
SKP1P63208 RNU6-505P-201ENST00000384427 107 ntBASIC0.56□□□□□ -2.32
SKP1P63208 Y_RNA.504-201ENST00000384481 104 ntBASIC0.56□□□□□ -2.32
SKP1P63208 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
SKP1P63208 AF228730.1-201ENST00000397972 663 ntBASIC0.56□□□□□ -2.32
SKP1P63208 Y_RNA.608-201ENST00000410647 95 ntBASIC0.56□□□□□ -2.32
SKP1P63208 RNU2-8P-201ENST00000410727 190 ntBASIC0.56□□□□□ -2.32
SKP1P63208 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.56□□□□□ -2.32
SKP1P63208 AC012306.1-201ENST00000423267 114 ntBASIC0.56□□□□□ -2.32
SKP1P63208 AL162395.1-201ENST00000457882 422 ntBASIC0.56□□□□□ -2.32
SKP1P63208 RPS27P22-201ENST00000478056 241 ntBASIC0.56□□□□□ -2.32
SKP1P63208 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.56□□□□□ -2.32
SKP1P63208 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.56□□□□□ -2.32
SKP1P63208 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.56□□□□□ -2.32
SKP1P63208 AP003181.2-201ENST00000528941 181 ntBASIC0.56□□□□□ -2.32
SKP1P63208 AC091805.2-201ENST00000603848 235 ntBASIC0.56□□□□□ -2.32
SKP1P63208 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
SKP1P63208 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
SKP1P63208 SNORD115-7-201ENST00000365306 82 ntBASIC0.55□□□□□ -2.32
SKP1P63208 RNU6-969P-201ENST00000383900 105 ntBASIC0.55□□□□□ -2.32
SKP1P63208 RNA5SP109-201ENST00000391010 116 ntBASIC0.55□□□□□ -2.32
SKP1P63208 RN7SKP200-201ENST00000410564 320 ntBASIC0.55□□□□□ -2.32
SKP1P63208 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.55□□□□□ -2.32
SKP1P63208 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.55□□□□□ -2.32
SKP1P63208 AC084290.1-201ENST00000434995 374 ntBASIC0.55□□□□□ -2.32
SKP1P63208 USP9YP25-201ENST00000457708 443 ntBASIC0.55□□□□□ -2.32
SKP1P63208 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.55□□□□□ -2.32
SKP1P63208 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.55□□□□□ -2.32
SKP1P63208 HSPE1P23-201ENST00000509838 286 ntBASIC0.55□□□□□ -2.32
SKP1P63208 LRRC34P2-201ENST00000514850 553 ntBASIC0.55□□□□□ -2.32
SKP1P63208 RNU6-922P-201ENST00000516753 99 ntBASIC0.55□□□□□ -2.32
SKP1P63208 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.55□□□□□ -2.32
SKP1P63208 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.55□□□□□ -2.32
SKP1P63208 AL390123.1-201ENST00000603216 237 ntBASIC0.55□□□□□ -2.32
SKP1P63208 AL031281.1-201ENST00000604049 488 ntBASIC0.55□□□□□ -2.32
SKP1P63208 AL139418.1-201ENST00000613613 177 ntBASIC0.55□□□□□ -2.32
SKP1P63208 AL513423.1-201ENST00000621695 132 ntBASIC0.55□□□□□ -2.32
SKP1P63208 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
SKP1P63208 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.54□□□□□ -2.32
SKP1P63208 MTND5P17-201ENST00000418405 1603 ntBASIC0.54□□□□□ -2.32
SKP1P63208 Y_RNA.122-201ENST00000363331 96 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms