Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.9□□□□□ -1.95
CLRN1P58418 SNORA67.7-201ENST00000516664 135 ntBASIC2.9□□□□□ -1.95
CLRN1P58418 HSPE1P18-201ENST00000517602 280 ntBASIC2.9□□□□□ -1.95
CLRN1P58418 AC027176.1-201ENST00000560204 514 ntBASIC2.9□□□□□ -1.95
CLRN1P58418 MIR4643-201ENST00000577473 78 ntBASIC2.9□□□□□ -1.95
CLRN1P58418 AC103810.1-201ENST00000579873 453 ntBASIC2.9□□□□□ -1.95
CLRN1P58418 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.9□□□□□ -1.95
CLRN1P58418 RPL30P11-203ENST00000598995 310 ntBASIC2.9□□□□□ -1.95
CLRN1P58418 TCL6_2.1-201ENST00000615162 119 ntBASIC2.9□□□□□ -1.95
CLRN1P58418 AC073476.4-201ENST00000628409 72 ntBASIC2.9□□□□□ -1.95
CLRN1P58418 IGHVIII-44-202ENST00000636235 289 ntBASIC2.9□□□□□ -1.95
CLRN1P58418 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.9□□□□□ -1.95
CLRN1P58418 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.9□□□□□ -1.95
CLRN1P58418 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
CLRN1P58418 AC091564.4-201ENST00000533934 2194 ntBASIC2.9□□□□□ -1.95
CLRN1P58418 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLRN1P58418 Y_RNA.269-201ENST00000364685 89 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 SNORA72.2-201ENST00000365028 127 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 Y_RNA.415-201ENST00000384012 112 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 RNU6-1083P-201ENST00000384022 107 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 Y_RNA.446-201ENST00000384178 104 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 SNORD58.1-201ENST00000391313 66 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 RPL23AP36-201ENST00000413895 458 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 TRIAP1P1-201ENST00000427062 225 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.89□□□□□ -1.95
CLRN1P58418 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.89□□□□□ -1.95
CLRN1P58418 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 RNA5SP112-201ENST00000515937 99 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 RNU6-138P-201ENST00000515952 107 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 RNA5SP217-201ENST00000515959 91 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 RNU6-966P-201ENST00000516479 104 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.89□□□□□ -1.95
CLRN1P58418 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.89□□□□□ -1.95
CLRN1P58418 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.89□□□□□ -1.95
CLRN1P58418 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.89□□□□□ -1.95
CLRN1P58418 MIR5006-201ENST00000583027 110 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 AC009779.6-201ENST00000603972 165 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 AL670379.2-201ENST00000604983 252 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 AC022441.3-201ENST00000605737 136 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 AC037487.3-201ENST00000606668 112 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 AC004467.1-201ENST00000615678 330 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.89□□□□□ -1.95
CLRN1P58418 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.89□□□□□ -1.95
CLRN1P58418 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.89□□□□□ -1.95
CLRN1P58418 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLRN1P58418 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.89□□□□□ -1.95
CLRN1P58418 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.88□□□□□ -1.95
CLRN1P58418 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLRN1P58418 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CLRN1P58418 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CLRN1P58418 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.88□□□□□ -1.95
CLRN1P58418 RNU1-33P-201ENST00000364249 162 ntBASIC2.88□□□□□ -1.95
CLRN1P58418 RNA5SP139-201ENST00000364340 117 ntBASIC2.88□□□□□ -1.95
CLRN1P58418 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLRN1P58418 MIR670-201ENST00000390142 98 ntBASIC2.88□□□□□ -1.95
CLRN1P58418 RPL19P1-201ENST00000411635 428 ntBASIC2.88□□□□□ -1.95
CLRN1P58418 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.88□□□□□ -1.95
CLRN1P58418 AC091179.1-201ENST00000461606 579 ntBASIC2.88□□□□□ -1.95
CLRN1P58418 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.88□□□□□ -1.95
CLRN1P58418 PHBP14-201ENST00000512887 367 ntBASIC2.88□□□□□ -1.95
CLRN1P58418 RNU2-44P-201ENST00000516795 194 ntBASIC2.88□□□□□ -1.95
CLRN1P58418 AC104027.1-201ENST00000521887 300 ntBASIC2.88□□□□□ -1.95
CLRN1P58418 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.88□□□□□ -1.95
CLRN1P58418 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.88□□□□□ -1.95
CLRN1P58418 MIR4429-201ENST00000580105 73 ntBASIC2.88□□□□□ -1.95
CLRN1P58418 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.88□□□□□ -1.95
CLRN1P58418 MIR3944-201ENST00000581277 108 ntBASIC2.88□□□□□ -1.95
CLRN1P58418 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.88□□□□□ -1.95
CLRN1P58418 MIR6075-201ENST00000620782 95 ntBASIC2.88□□□□□ -1.95
CLRN1P58418 AC091932.3-201ENST00000624223 323 ntBASIC2.88□□□□□ -1.95
CLRN1P58418 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLRN1P58418 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLRN1P58418 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CLRN1P58418 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLRN1P58418 AL049781.1-201ENST00000623195 3585 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLRN1P58418 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLRN1P58418 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.87□□□□□ -1.95
CLRN1P58418 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.87□□□□□ -1.95
CLRN1P58418 Y_RNA.44-201ENST00000362676 108 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 Y_RNA.101-201ENST00000363154 102 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 SNORD56.3-201ENST00000363507 71 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 RNU6-200P-201ENST00000364743 107 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 Y_RNA.383-201ENST00000383855 97 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 MIR7-3-201ENST00000384898 110 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 RNA5SP229-201ENST00000410809 99 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 RNU2-64P-201ENST00000411315 191 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 MTND5P15-201ENST00000434246 349 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.87□□□□□ -1.95
CLRN1P58418 POLR2KP2-201ENST00000438155 177 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 MRPS10P1-201ENST00000448483 130 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 AC005042.3-201ENST00000453230 174 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 AC146507.2-201ENST00000460608 476 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 RPL31P41-201ENST00000477967 372 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 AC140059.1-201ENST00000489238 361 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.87□□□□□ -1.95
CLRN1P58418 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.87□□□□□ -1.95
CLRN1P58418 RNU4-71P-201ENST00000516258 113 ntBASIC2.87□□□□□ -1.95
CLRN1P58418 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms