Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 MIR5701-1-201ENST00000585138 82 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 AL360085.1-201ENST00000604713 532 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 MIR5701-2-201ENST00000615634 82 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 MIR5739-201ENST00000619803 80 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 MIR6873-201ENST00000622788 63 ntBASIC2.51□□□□□ -2.01
CLCN3P51790 AC135776.4-201ENST00000624300 1904 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CLCN3P51790 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.5□□□□□ -2.01
CLCN3P51790 RNA5SP240-201ENST00000365355 128 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 RNU6-1032P-201ENST00000384100 107 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 RNY1P14-201ENST00000384426 108 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 MIR95-201ENST00000385072 81 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 RPL19P1-201ENST00000411635 428 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 MCFD2P1-201ENST00000417812 300 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 MTND2P23-201ENST00000422990 651 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.5□□□□□ -2.01
CLCN3P51790 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.5□□□□□ -2.01
CLCN3P51790 AC096638.1-201ENST00000444678 216 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 CYP2C59P-201ENST00000457790 269 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 AIG1P1-201ENST00000503376 148 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 AC022493.2-201ENST00000506122 481 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 RNU6-699P-201ENST00000517081 110 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 RN7SKP295-201ENST00000517264 153 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 AC023824.2-201ENST00000566185 400 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CLCN3P51790 AC060766.3-201ENST00000591442 263 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 RPL30P11-203ENST00000598995 310 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 AL355802.3-201ENST00000607571 545 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 AC009318.2-201ENST00000610917 651 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 MIR6715A-201ENST00000615929 79 ntBASIC2.5□□□□□ -2.01
CLCN3P51790 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.49□□□□□ -2.01
CLCN3P51790 Y_RNA.2-201ENST00000362330 96 ntBASIC2.49□□□□□ -2.01
CLCN3P51790 RNU1-115P-201ENST00000365329 160 ntBASIC2.49□□□□□ -2.01
CLCN3P51790 DEFA7P-201ENST00000382676 285 ntBASIC2.49□□□□□ -2.01
CLCN3P51790 Y_RNA.422-201ENST00000384054 114 ntBASIC2.49□□□□□ -2.01
CLCN3P51790 MIR606-201ENST00000384851 96 ntBASIC2.49□□□□□ -2.01
CLCN3P51790 AC073901.1-201ENST00000462471 408 ntBASIC2.49□□□□□ -2.01
CLCN3P51790 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.49□□□□□ -2.01
CLCN3P51790 ACA59.1-201ENST00000515966 143 ntBASIC2.49□□□□□ -2.01
CLCN3P51790 RPPH1-2P-201ENST00000516688 293 ntBASIC2.49□□□□□ -2.01
CLCN3P51790 RNU6-307P-201ENST00000516743 106 ntBASIC2.49□□□□□ -2.01
CLCN3P51790 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.49□□□□□ -2.01
CLCN3P51790 CBX3P8-201ENST00000532412 525 ntBASIC2.49□□□□□ -2.01
CLCN3P51790 HSPE1P4-201ENST00000550617 308 ntBASIC2.49□□□□□ -2.01
CLCN3P51790 AL713866.2-201ENST00000603579 219 ntBASIC2.49□□□□□ -2.01
CLCN3P51790 AC040896.1-201ENST00000613819 479 ntBASIC2.49□□□□□ -2.01
CLCN3P51790 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.49□□□□□ -2.01
CLCN3P51790 MIR6766-201ENST00000622641 72 ntBASIC2.49□□□□□ -2.01
CLCN3P51790 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CLCN3P51790 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CLCN3P51790 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CLCN3P51790 MIR6073-201ENST00000352083 89 ntBASIC2.48□□□□□ -2.01
CLCN3P51790 RNU6-595P-201ENST00000363944 107 ntBASIC2.48□□□□□ -2.01
CLCN3P51790 RNU6-142P-201ENST00000384019 107 ntBASIC2.48□□□□□ -2.01
CLCN3P51790 RNU6-790P-201ENST00000384479 105 ntBASIC2.48□□□□□ -2.01
CLCN3P51790 MRPS18CP6-201ENST00000423587 223 ntBASIC2.48□□□□□ -2.01
CLCN3P51790 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.48□□□□□ -2.01
CLCN3P51790 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.48□□□□□ -2.01
CLCN3P51790 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.48□□□□□ -2.01
CLCN3P51790 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.48□□□□□ -2.01
CLCN3P51790 FO393415.2-201ENST00000480085 343 ntBASIC2.48□□□□□ -2.01
CLCN3P51790 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.48□□□□□ -2.01
CLCN3P51790 RNU5F-2P-201ENST00000516066 82 ntBASIC2.48□□□□□ -2.01
CLCN3P51790 RNU6-1137P-201ENST00000517073 99 ntBASIC2.48□□□□□ -2.01
CLCN3P51790 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CLCN3P51790 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.48□□□□□ -2.01
CLCN3P51790 AC021231.3-201ENST00000558497 370 ntBASIC2.48□□□□□ -2.01
CLCN3P51790 AC016925.2-201ENST00000605108 242 ntBASIC2.48□□□□□ -2.01
CLCN3P51790 AC008121.3-201ENST00000618726 433 ntBASIC2.48□□□□□ -2.01
CLCN3P51790 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.48□□□□□ -2.01
CLCN3P51790 AC009541.1-201ENST00000438279 2662 ntBASIC2.47□□□□□ -2.01
CLCN3P51790 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CLCN3P51790 VTRNA1-1-201ENST00000363120 99 ntBASIC2.47□□□□□ -2.01
CLCN3P51790 Y_RNA.533-201ENST00000384596 114 ntBASIC2.47□□□□□ -2.01
CLCN3P51790 MIR29B2-201ENST00000385055 81 ntBASIC2.47□□□□□ -2.01
CLCN3P51790 RNU2-63P-201ENST00000410792 194 ntBASIC2.47□□□□□ -2.01
CLCN3P51790 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.47□□□□□ -2.01
CLCN3P51790 RPL17P19-201ENST00000489069 552 ntBASIC2.47□□□□□ -2.01
CLCN3P51790 AC104564.1-201ENST00000493028 407 ntBASIC2.47□□□□□ -2.01
CLCN3P51790 HMGB1P35-201ENST00000503360 598 ntBASIC2.47□□□□□ -2.01
CLCN3P51790 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.47□□□□□ -2.01
CLCN3P51790 RNU6-327P-201ENST00000516270 127 ntBASIC2.47□□□□□ -2.01
CLCN3P51790 RNU6-1045P-201ENST00000516321 107 ntBASIC2.47□□□□□ -2.01
CLCN3P51790 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.47□□□□□ -2.01
CLCN3P51790 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.47□□□□□ -2.01
CLCN3P51790 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.47□□□□□ -2.01
CLCN3P51790 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.47□□□□□ -2.01
CLCN3P51790 AC006504.6-201ENST00000590142 199 ntBASIC2.47□□□□□ -2.01
CLCN3P51790 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.47□□□□□ -2.01
CLCN3P51790 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.47□□□□□ -2.01
CLCN3P51790 AC007485.1-201ENST00000616755 206 ntBASIC2.47□□□□□ -2.01
CLCN3P51790 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CLCN3P51790 AC138305.3-201ENST00000624988 240 ntBASIC2.47□□□□□ -2.01
CLCN3P51790 RNU4-56P-201ENST00000364700 142 ntBASIC2.46□□□□□ -2.02
CLCN3P51790 Y_RNA.577-201ENST00000384794 101 ntBASIC2.46□□□□□ -2.02
CLCN3P51790 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.46□□□□□ -2.02
CLCN3P51790 MTND3P9-201ENST00000429526 346 ntBASIC2.46□□□□□ -2.02
CLCN3P51790 AL161788.1-201ENST00000441805 169 ntBASIC2.46□□□□□ -2.02
CLCN3P51790 AC068781.1-201ENST00000488231 618 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms