Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 RNU6-534P-201ENST00000364877 106 ntBASIC-1.15□□□□□ -2.59
CPS1P31327 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-1.15□□□□□ -2.59
CPS1P31327 AL353752.1-201ENST00000454946 260 ntBASIC-1.15□□□□□ -2.59
CPS1P31327 AC009646.1-201ENST00000510455 318 ntBASIC-1.15□□□□□ -2.59
CPS1P31327 MIR365A-201ENST00000362260 87 ntBASIC-1.16□□□□□ -2.6
CPS1P31327 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.16□□□□□ -2.6
CPS1P31327 AC012308.1-201ENST00000451232 178 ntBASIC-1.16□□□□□ -2.6
CPS1P31327 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-1.16□□□□□ -2.6
CPS1P31327 AC013828.1-201ENST00000481845 158 ntBASIC-1.16□□□□□ -2.6
CPS1P31327 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-1.16□□□□□ -2.6
CPS1P31327 AC090049.2-201ENST00000550377 109 ntBASIC-1.16□□□□□ -2.6
CPS1P31327 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-1.16□□□□□ -2.6
CPS1P31327 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-1.16□□□□□ -2.6
CPS1P31327 Y_RNA.256-201ENST00000364594 104 ntBASIC-1.17□□□□□ -2.6
CPS1P31327 SNORA8.2-201ENST00000384372 139 ntBASIC-1.17□□□□□ -2.6
CPS1P31327 RNU6-925P-201ENST00000384629 104 ntBASIC-1.17□□□□□ -2.6
CPS1P31327 AL603865.2-201ENST00000401679 213 ntBASIC-1.17□□□□□ -2.6
CPS1P31327 RPL31P54-201ENST00000429803 370 ntBASIC-1.17□□□□□ -2.6
CPS1P31327 MTND4P32-201ENST00000437189 1237 ntBASIC-1.17□□□□□ -2.6
CPS1P31327 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-1.17□□□□□ -2.6
CPS1P31327 SRRM1P2-201ENST00000464531 1192 ntBASIC-1.17□□□□□ -2.6
CPS1P31327 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-1.17□□□□□ -2.6
CPS1P31327 RNA5SP94-201ENST00000516917 108 ntBASIC-1.17□□□□□ -2.6
CPS1P31327 RNU6-94P-201ENST00000607728 107 ntBASIC-1.17□□□□□ -2.6
CPS1P31327 AC063943.3-201ENST00000615562 356 ntBASIC-1.17□□□□□ -2.6
CPS1P31327 MIR412-201ENST00000362142 91 ntBASIC-1.18□□□□□ -2.6
CPS1P31327 AC010153.1-201ENST00000432862 727 ntBASIC-1.18□□□□□ -2.6
CPS1P31327 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-1.18□□□□□ -2.6
CPS1P31327 MTCO3P43-201ENST00000440974 771 ntBASIC-1.18□□□□□ -2.6
CPS1P31327 AP002001.1-203ENST00000534002 267 ntBASIC-1.18□□□□□ -2.6
CPS1P31327 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-1.18□□□□□ -2.6
CPS1P31327 TPRKBP2-201ENST00000565969 475 ntBASIC-1.18□□□□□ -2.6
CPS1P31327 AC024940.5-201ENST00000622889 474 ntBASIC-1.18□□□□□ -2.6
CPS1P31327 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-1.19□□□□□ -2.6
CPS1P31327 MTND1P17-201ENST00000448961 204 ntBASIC-1.19□□□□□ -2.6
CPS1P31327 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-1.19□□□□□ -2.6
CPS1P31327 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-1.19□□□□□ -2.6
CPS1P31327 MIR4300-201ENST00000581016 96 ntBASIC-1.19□□□□□ -2.6
CPS1P31327 MIR6755-201ENST00000619993 66 ntBASIC-1.19□□□□□ -2.6
CPS1P31327 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.2□□□□□ -2.6
CPS1P31327 MIR454-201ENST00000390180 115 ntBASIC-1.2□□□□□ -2.6
CPS1P31327 AL451046.2-201ENST00000403074 277 ntBASIC-1.2□□□□□ -2.6
CPS1P31327 SNORD111-201ENST00000408139 94 ntBASIC-1.2□□□□□ -2.6
CPS1P31327 RNU6-994P-201ENST00000410507 111 ntBASIC-1.2□□□□□ -2.6
CPS1P31327 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-1.2□□□□□ -2.6
CPS1P31327 RPS15AP10-201ENST00000432472 382 ntBASIC-1.2□□□□□ -2.6
CPS1P31327 USP9YP22-201ENST00000438971 294 ntBASIC-1.2□□□□□ -2.6
CPS1P31327 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.2□□□□□ -2.6
CPS1P31327 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-1.2□□□□□ -2.6
CPS1P31327 AC078795.2-201ENST00000602835 1252 ntBASIC-1.2□□□□□ -2.6
CPS1P31327 ENSAP3-201ENST00000312710 333 ntBASIC-1.2□□□□□ -2.6
CPS1P31327 MIR1-1-201ENST00000362147 71 ntBASIC-1.2□□□□□ -2.6
CPS1P31327 snoU2_19.1-201ENST00000362361 80 ntBASIC-1.2□□□□□ -2.6
CPS1P31327 RNU4-76P-201ENST00000364509 141 ntBASIC-1.2□□□□□ -2.6
CPS1P31327 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-1.2□□□□□ -2.6
CPS1P31327 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-1.2□□□□□ -2.6
CPS1P31327 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-1.2□□□□□ -2.6
CPS1P31327 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-1.2□□□□□ -2.6
CPS1P31327 STAG3L5P-204ENST00000443759 179 ntBASIC-1.2□□□□□ -2.6
CPS1P31327 SUMO1P1-201ENST00000497904 306 ntBASIC-1.2□□□□□ -2.6
CPS1P31327 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-1.2□□□□□ -2.6
CPS1P31327 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-1.2□□□□□ -2.6
CPS1P31327 AP002453.2-201ENST00000533503 320 ntBASIC-1.2□□□□□ -2.6
CPS1P31327 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-1.2□□□□□ -2.6
CPS1P31327 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-1.21□□□□□ -2.6
CPS1P31327 LARP1BP3-201ENST00000437229 869 ntBASIC-1.21□□□□□ -2.6
CPS1P31327 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-1.21□□□□□ -2.6
CPS1P31327 MED28P2-201ENST00000475771 317 ntBASIC-1.21□□□□□ -2.6
CPS1P31327 AC010133.1-201ENST00000615809 842 ntBASIC-1.21□□□□□ -2.6
CPS1P31327 MIR6738-201ENST00000619620 64 ntBASIC-1.21□□□□□ -2.6
CPS1P31327 MIR4788-201ENST00000639104 80 ntBASIC-1.21□□□□□ -2.6
CPS1P31327 BTF3L4P3-201ENST00000418879 476 ntBASIC-1.22□□□□□ -2.6
CPS1P31327 AC087499.4-201ENST00000448505 178 ntBASIC-1.22□□□□□ -2.6
CPS1P31327 snoU13.14-201ENST00000459372 104 ntBASIC-1.22□□□□□ -2.6
CPS1P31327 NDUFA4P2-201ENST00000489989 244 ntBASIC-1.22□□□□□ -2.6
CPS1P31327 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-1.22□□□□□ -2.6
CPS1P31327 AL929325.1-201ENST00000603096 117 ntBASIC-1.22□□□□□ -2.6
CPS1P31327 AC104695.3-201ENST00000604052 296 ntBASIC-1.22□□□□□ -2.6
CPS1P31327 SCARNA4-202ENST00000625402 129 ntBASIC-1.22□□□□□ -2.6
CPS1P31327 RNU6-1031P-201ENST00000384773 107 ntBASIC-1.23□□□□□ -2.61
CPS1P31327 FCF1P10-201ENST00000407590 479 ntBASIC-1.23□□□□□ -2.61
CPS1P31327 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-1.23□□□□□ -2.61
CPS1P31327 GPM6BP2-201ENST00000432046 144 ntBASIC-1.23□□□□□ -2.61
CPS1P31327 GPM6BP1-201ENST00000446387 144 ntBASIC-1.23□□□□□ -2.61
CPS1P31327 RNU4-49P-201ENST00000516080 140 ntBASIC-1.23□□□□□ -2.61
CPS1P31327 RBM11P1-201ENST00000604951 799 ntBASIC-1.23□□□□□ -2.61
CPS1P31327 SMIM11P1-201ENST00000369586 178 ntBASIC-1.24□□□□□ -2.61
CPS1P31327 AL136310.1-201ENST00000404926 654 ntBASIC-1.24□□□□□ -2.61
CPS1P31327 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-1.24□□□□□ -2.61
CPS1P31327 AC092685.1-201ENST00000447960 1243 ntBASIC-1.24□□□□□ -2.61
CPS1P31327 MTND3P19-201ENST00000603825 345 ntBASIC-1.24□□□□□ -2.61
CPS1P31327 AC011374.2-201ENST00000607135 526 ntBASIC-1.24□□□□□ -2.61
CPS1P31327 EIF4E2P1-201ENST00000393781 255 ntBASIC-1.25□□□□□ -2.61
CPS1P31327 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.25□□□□□ -2.61
CPS1P31327 MTCO3P1-205ENST00000422088 832 ntBASIC-1.25□□□□□ -2.61
CPS1P31327 RNU6-848P-201ENST00000515948 107 ntBASIC-1.25□□□□□ -2.61
CPS1P31327 RNU6-617P-201ENST00000516147 107 ntBASIC-1.25□□□□□ -2.61
CPS1P31327 RNU6-473P-201ENST00000516164 107 ntBASIC-1.25□□□□□ -2.61
CPS1P31327 RNU6-1049P-201ENST00000516414 107 ntBASIC-1.25□□□□□ -2.61
CPS1P31327 AC007014.2-201ENST00000615581 479 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms