Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 AC093027.1-201ENST00000546698 429 ntBASIC2.45□□□□□ -2.02
HOXC9P31274 AL355375.2-201ENST00000574825 175 ntBASIC2.45□□□□□ -2.02
HOXC9P31274 MIR4498-201ENST00000577599 66 ntBASIC2.45□□□□□ -2.02
HOXC9P31274 MIR4273-201ENST00000582824 84 ntBASIC2.45□□□□□ -2.02
HOXC9P31274 AL356157.2-201ENST00000605122 111 ntBASIC2.45□□□□□ -2.02
HOXC9P31274 AC009229.3-201ENST00000608056 282 ntBASIC2.45□□□□□ -2.02
HOXC9P31274 PISRT1.1-201ENST00000616930 107 ntBASIC2.45□□□□□ -2.02
HOXC9P31274 SNORA43.4-201ENST00000629559 138 ntBASIC2.45□□□□□ -2.02
HOXC9P31274 Y_RNA.2-201ENST00000362330 96 ntBASIC2.44□□□□□ -2.02
HOXC9P31274 Y_RNA.4-201ENST00000362333 112 ntBASIC2.44□□□□□ -2.02
HOXC9P31274 RNU6-593P-201ENST00000364716 112 ntBASIC2.44□□□□□ -2.02
HOXC9P31274 RNU6-968P-201ENST00000384076 107 ntBASIC2.44□□□□□ -2.02
HOXC9P31274 RNU6-1050P-201ENST00000410388 107 ntBASIC2.44□□□□□ -2.02
HOXC9P31274 RN7SKP61-201ENST00000410642 295 ntBASIC2.44□□□□□ -2.02
HOXC9P31274 AC022028.1-201ENST00000412054 408 ntBASIC2.44□□□□□ -2.02
HOXC9P31274 CYCSP48-201ENST00000417124 323 ntBASIC2.44□□□□□ -2.02
HOXC9P31274 AL353752.1-201ENST00000454946 260 ntBASIC2.44□□□□□ -2.02
HOXC9P31274 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.44□□□□□ -2.02
HOXC9P31274 SNORD5.1-201ENST00000458800 75 ntBASIC2.44□□□□□ -2.02
HOXC9P31274 SNORA25.15-201ENST00000516487 89 ntBASIC2.44□□□□□ -2.02
HOXC9P31274 AL713866.2-201ENST00000603579 219 ntBASIC2.44□□□□□ -2.02
HOXC9P31274 AL449363.1-201ENST00000617815 186 ntBASIC2.44□□□□□ -2.02
HOXC9P31274 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.44□□□□□ -2.02
HOXC9P31274 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HOXC9P31274 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HOXC9P31274 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
HOXC9P31274 KPNA2P1-201ENST00000458289 1591 ntBASIC2.44□□□□□ -2.02
HOXC9P31274 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
HOXC9P31274 AC092268.1-201ENST00000342691 405 ntBASIC2.43□□□□□ -2.02
HOXC9P31274 Y_RNA.48-201ENST00000362710 103 ntBASIC2.43□□□□□ -2.02
HOXC9P31274 Y_RNA.67-201ENST00000362870 100 ntBASIC2.43□□□□□ -2.02
HOXC9P31274 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXC9P31274 Y_RNA.384-201ENST00000383909 102 ntBASIC2.43□□□□□ -2.02
HOXC9P31274 RNU6-142P-201ENST00000384019 107 ntBASIC2.43□□□□□ -2.02
HOXC9P31274 RNU6-842P-201ENST00000384269 107 ntBASIC2.43□□□□□ -2.02
HOXC9P31274 CBX3P9-201ENST00000402326 552 ntBASIC2.43□□□□□ -2.02
HOXC9P31274 AC078809.1-201ENST00000427601 140 ntBASIC2.43□□□□□ -2.02
HOXC9P31274 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXC9P31274 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXC9P31274 SUMO1P4-201ENST00000429430 302 ntBASIC2.43□□□□□ -2.02
HOXC9P31274 AC090096.1-201ENST00000489168 390 ntBASIC2.43□□□□□ -2.02
HOXC9P31274 HMGB1P35-201ENST00000503360 598 ntBASIC2.43□□□□□ -2.02
HOXC9P31274 MTND3P22-201ENST00000510932 243 ntBASIC2.43□□□□□ -2.02
HOXC9P31274 Y_RNA.675-201ENST00000516389 149 ntBASIC2.43□□□□□ -2.02
HOXC9P31274 Y_RNA.708-201ENST00000516950 96 ntBASIC2.43□□□□□ -2.02
HOXC9P31274 RAB11AP2-201ENST00000545905 639 ntBASIC2.43□□□□□ -2.02
HOXC9P31274 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXC9P31274 FRG2DP-202ENST00000566967 323 ntBASIC2.43□□□□□ -2.02
HOXC9P31274 MIR4255-201ENST00000579351 72 ntBASIC2.43□□□□□ -2.02
HOXC9P31274 AL034555.1-201ENST00000604816 211 ntBASIC2.43□□□□□ -2.02
HOXC9P31274 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.43□□□□□ -2.02
HOXC9P31274 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXC9P31274 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HOXC9P31274 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
HOXC9P31274 AC233981.2-201ENST00000611524 1614 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 Y_RNA.58-201ENST00000362807 102 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 SNORD50.1-201ENST00000362987 71 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 RNU4-73P-201ENST00000363164 141 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 Y_RNA.154-201ENST00000363624 102 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 RNU4-56P-201ENST00000364700 142 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 RNA5SP125-201ENST00000364843 120 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 RNY3P1-201ENST00000365085 102 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 RNY3-201ENST00000365484 102 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 RNU6-784P-201ENST00000384330 106 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 Y_RNA.490-201ENST00000384413 102 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 MT-TD-201ENST00000387419 68 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HOXC9P31274 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXC9P31274 snoU13.6-201ENST00000458785 104 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 RNU6-717P-201ENST00000459076 104 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 AC080013.2-201ENST00000460866 323 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 APOOP3-201ENST00000536787 586 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.42□□□□□ -2.02
HOXC9P31274 MIR5194-201ENST00000582634 120 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 AL078605.1-201ENST00000603529 500 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 AP000654.2-201ENST00000605633 586 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 MTND4LP32-201ENST00000636111 270 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HOXC9P31274 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.42□□□□□ -2.02
HOXC9P31274 AP000560.1-201ENST00000624150 1937 ntBASIC2.42□□□□□ -2.02
HOXC9P31274 MTND5P9-201ENST00000503854 1755 ntBASIC2.41□□□□□ -2.02
HOXC9P31274 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HOXC9P31274 SNORA38-201ENST00000363946 132 ntBASIC2.41□□□□□ -2.02
HOXC9P31274 Y_RNA.387-201ENST00000383918 102 ntBASIC2.41□□□□□ -2.02
HOXC9P31274 RNU6-1297P-201ENST00000384415 104 ntBASIC2.41□□□□□ -2.02
HOXC9P31274 Y_RNA.533-201ENST00000384596 114 ntBASIC2.41□□□□□ -2.02
HOXC9P31274 RNU6-1072P-201ENST00000384703 107 ntBASIC2.41□□□□□ -2.02
HOXC9P31274 RNU6-443P-201ENST00000384780 107 ntBASIC2.41□□□□□ -2.02
HOXC9P31274 SNORA75.4-201ENST00000391278 119 ntBASIC2.41□□□□□ -2.02
HOXC9P31274 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXC9P31274 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXC9P31274 RNU7-26P-201ENST00000458980 63 ntBASIC2.41□□□□□ -2.02
HOXC9P31274 AC021146.2-201ENST00000504736 556 ntBASIC2.41□□□□□ -2.02
HOXC9P31274 FGF7P4-201ENST00000509595 295 ntBASIC2.41□□□□□ -2.02
HOXC9P31274 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXC9P31274 AC021231.3-201ENST00000558497 370 ntBASIC2.41□□□□□ -2.02
HOXC9P31274 AC023824.2-201ENST00000566185 400 ntBASIC2.41□□□□□ -2.02
HOXC9P31274 MIR5571-201ENST00000577998 113 ntBASIC2.41□□□□□ -2.02
HOXC9P31274 MIR3136-201ENST00000583498 78 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms