Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AP006437.1-201ENST00000641440 3685 ntBASIC4.14□□□□□ -1.75
RXRBP28702 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RXRBP28702 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RXRBP28702 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.13□□□□□ -1.75
RXRBP28702 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RXRBP28702 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RXRBP28702 MIR22-201ENST00000362190 85 ntBASIC4.13□□□□□ -1.75
RXRBP28702 SNORA31-201ENST00000362607 130 ntBASIC4.13□□□□□ -1.75
RXRBP28702 Y_RNA.319-201ENST00000365138 92 ntBASIC4.13□□□□□ -1.75
RXRBP28702 RNU6-449P-201ENST00000383914 107 ntBASIC4.13□□□□□ -1.75
RXRBP28702 SNORA18.3-201ENST00000384122 132 ntBASIC4.13□□□□□ -1.75
RXRBP28702 MIR764-201ENST00000390811 85 ntBASIC4.13□□□□□ -1.75
RXRBP28702 HMGN2P8-201ENST00000391458 268 ntBASIC4.13□□□□□ -1.75
RXRBP28702 RNU2-52P-201ENST00000410680 190 ntBASIC4.13□□□□□ -1.75
RXRBP28702 TOMM22P1-201ENST00000418578 312 ntBASIC4.13□□□□□ -1.75
RXRBP28702 EIF1AXP1-201ENST00000419267 435 ntBASIC4.13□□□□□ -1.75
RXRBP28702 AL591806.2-201ENST00000433122 173 ntBASIC4.13□□□□□ -1.75
RXRBP28702 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.13□□□□□ -1.75
RXRBP28702 SNORD109B-201ENST00000458961 67 ntBASIC4.13□□□□□ -1.75
RXRBP28702 SNORD109A-201ENST00000459128 67 ntBASIC4.13□□□□□ -1.75
RXRBP28702 RNU5F-8P-201ENST00000515941 111 ntBASIC4.13□□□□□ -1.75
RXRBP28702 RNA5SP272-201ENST00000516095 111 ntBASIC4.13□□□□□ -1.75
RXRBP28702 SNORD116-25-201ENST00000516517 92 ntBASIC4.13□□□□□ -1.75
RXRBP28702 RNU6-58P-201ENST00000517143 103 ntBASIC4.13□□□□□ -1.75
RXRBP28702 AL133393.1-201ENST00000603277 287 ntBASIC4.13□□□□□ -1.75
RXRBP28702 AP002826.1-201ENST00000608835 315 ntBASIC4.13□□□□□ -1.75
RXRBP28702 AC006001.4-201ENST00000622243 395 ntBASIC4.13□□□□□ -1.75
RXRBP28702 AC009487.2-201ENST00000420969 6821 ntBASIC4.13□□□□□ -1.75
RXRBP28702 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.13□□□□□ -1.75
RXRBP28702 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RXRBP28702 RNU4-84P-201ENST00000364200 139 ntBASIC4.12□□□□□ -1.75
RXRBP28702 RNA5SP205-201ENST00000364653 136 ntBASIC4.12□□□□□ -1.75
RXRBP28702 Y_RNA.412-201ENST00000384001 104 ntBASIC4.12□□□□□ -1.75
RXRBP28702 MIR607-201ENST00000385241 96 ntBASIC4.12□□□□□ -1.75
RXRBP28702 U3.37-201ENST00000408528 213 ntBASIC4.12□□□□□ -1.75
RXRBP28702 RNU2-68P-201ENST00000410878 191 ntBASIC4.12□□□□□ -1.75
RXRBP28702 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.12□□□□□ -1.75
RXRBP28702 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.12□□□□□ -1.75
RXRBP28702 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.12□□□□□ -1.75
RXRBP28702 RNU6-703P-201ENST00000516946 107 ntBASIC4.12□□□□□ -1.75
RXRBP28702 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.12□□□□□ -1.75
RXRBP28702 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.12□□□□□ -1.75
RXRBP28702 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.12□□□□□ -1.75
RXRBP28702 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.12□□□□□ -1.75
RXRBP28702 AL008718.3-201ENST00000610217 321 ntBASIC4.12□□□□□ -1.75
RXRBP28702 uc_338.1-201ENST00000612113 180 ntBASIC4.12□□□□□ -1.75
RXRBP28702 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.12□□□□□ -1.75
RXRBP28702 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.12□□□□□ -1.75
RXRBP28702 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RXRBP28702 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RXRBP28702 AC080128.1-201ENST00000474389 1917 ntBASIC4.11□□□□□ -1.75
RXRBP28702 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RXRBP28702 RNU6-527P-201ENST00000363425 104 ntBASIC4.11□□□□□ -1.75
RXRBP28702 RNU6-137P-201ENST00000363680 108 ntBASIC4.11□□□□□ -1.75
RXRBP28702 RNA5SP189-201ENST00000364920 115 ntBASIC4.11□□□□□ -1.75
RXRBP28702 MIR569-201ENST00000385228 96 ntBASIC4.11□□□□□ -1.75
RXRBP28702 MIR1183-201ENST00000408856 89 ntBASIC4.11□□□□□ -1.75
RXRBP28702 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.11□□□□□ -1.75
RXRBP28702 AC087499.2-201ENST00000432861 149 ntBASIC4.11□□□□□ -1.75
RXRBP28702 RPS4XP22-201ENST00000480755 780 ntBASIC4.11□□□□□ -1.75
RXRBP28702 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.11□□□□□ -1.75
RXRBP28702 RNU6-191P-201ENST00000516295 94 ntBASIC4.11□□□□□ -1.75
RXRBP28702 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.11□□□□□ -1.75
RXRBP28702 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.11□□□□□ -1.75
RXRBP28702 AC005176.2-201ENST00000596933 147 ntBASIC4.11□□□□□ -1.75
RXRBP28702 AC048347.1-201ENST00000624621 427 ntBASIC4.11□□□□□ -1.75
RXRBP28702 AL109809.4-201ENST00000603520 2185 ntBASIC4.11□□□□□ -1.75
RXRBP28702 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RXRBP28702 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RXRBP28702 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RXRBP28702 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RXRBP28702 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
RXRBP28702 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.1□□□□□ -1.75
RXRBP28702 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RXRBP28702 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RXRBP28702 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.1□□□□□ -1.75
RXRBP28702 SNORD115-8-201ENST00000363856 82 ntBASIC4.1□□□□□ -1.75
RXRBP28702 SNORD115-38-201ENST00000365037 82 ntBASIC4.1□□□□□ -1.75
RXRBP28702 RNU6-541P-201ENST00000384709 110 ntBASIC4.1□□□□□ -1.75
RXRBP28702 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RXRBP28702 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.1□□□□□ -1.75
RXRBP28702 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.1□□□□□ -1.75
RXRBP28702 SCGB1D5P-201ENST00000515134 247 ntBASIC4.1□□□□□ -1.75
RXRBP28702 RNU6-1231P-201ENST00000517185 103 ntBASIC4.1□□□□□ -1.75
RXRBP28702 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.1□□□□□ -1.75
RXRBP28702 TRAV28-201ENST00000557548 323 ntBASIC4.1□□□□□ -1.75
RXRBP28702 MIR5571-201ENST00000577998 113 ntBASIC4.1□□□□□ -1.75
RXRBP28702 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.1□□□□□ -1.75
RXRBP28702 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.1□□□□□ -1.75
RXRBP28702 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.1□□□□□ -1.75
RXRBP28702 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RXRBP28702 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RXRBP28702 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RXRBP28702 ZNF204P-201ENST00000416749 2397 ntBASIC4.1□□□□□ -1.75
RXRBP28702 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
RXRBP28702 Y_RNA.23-201ENST00000362496 106 ntBASIC4.09□□□□□ -1.75
RXRBP28702 RNU4-80P-201ENST00000363200 141 ntBASIC4.09□□□□□ -1.75
RXRBP28702 RNU6-312P-201ENST00000364629 107 ntBASIC4.09□□□□□ -1.75
RXRBP28702 Y_RNA.261-201ENST00000364631 102 ntBASIC4.09□□□□□ -1.75
RXRBP28702 Y_RNA.353-201ENST00000365440 108 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms