Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 ATP5EP1-201ENST00000510257 156 ntBASIC2.32□□□□□ -2.04
ABCD3P28288 RNA5SP148-201ENST00000516527 94 ntBASIC2.32□□□□□ -2.04
ABCD3P28288 RNU2-44P-201ENST00000516795 194 ntBASIC2.32□□□□□ -2.04
ABCD3P28288 AC134698.4-201ENST00000523451 826 ntBASIC2.32□□□□□ -2.04
ABCD3P28288 PRELID2P1-201ENST00000552837 301 ntBASIC2.32□□□□□ -2.04
ABCD3P28288 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.32□□□□□ -2.04
ABCD3P28288 MIR5690-201ENST00000583739 73 ntBASIC2.32□□□□□ -2.04
ABCD3P28288 AC100812.1-201ENST00000607622 580 ntBASIC2.32□□□□□ -2.04
ABCD3P28288 U4.3-201ENST00000621047 82 ntBASIC2.32□□□□□ -2.04
ABCD3P28288 AC012640.5-201ENST00000623897 319 ntBASIC2.32□□□□□ -2.04
ABCD3P28288 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
ABCD3P28288 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ABCD3P28288 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ABCD3P28288 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ABCD3P28288 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
ABCD3P28288 RNY3P14-201ENST00000384309 102 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 Y_RNA.474-201ENST00000384341 102 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 RNU6-541P-201ENST00000384709 110 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 MIR518A2-201ENST00000384966 87 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 SNORA12.2-201ENST00000391040 156 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 MIR300-201ENST00000401138 83 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 RNU6-370P-201ENST00000411008 104 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 AC123900.1-201ENST00000420390 96 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.31□□□□□ -2.04
ABCD3P28288 AC004386.2-201ENST00000441858 148 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 AC093019.1-201ENST00000443135 252 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 AC009237.7-201ENST00000447357 229 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.31□□□□□ -2.04
ABCD3P28288 AC016925.1-201ENST00000458303 298 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 TOMM22P6-201ENST00000465035 409 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 RPL7P42-201ENST00000481005 679 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 RNU6-875P-201ENST00000516488 106 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 Y_RNA.706-201ENST00000516933 99 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 RNA5SP402-201ENST00000517148 110 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 DEFB131C-201ENST00000528817 165 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 ANP32BP3-201ENST00000559213 706 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.31□□□□□ -2.04
ABCD3P28288 MIR5006-201ENST00000583027 110 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.31□□□□□ -2.04
ABCD3P28288 AL669831.3-213ENST00000636676 183 ntBASIC2.31□□□□□ -2.04
ABCD3P28288 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.31□□□□□ -2.04
ABCD3P28288 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ABCD3P28288 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ABCD3P28288 RNA5SP456-201ENST00000364002 114 ntBASIC2.3□□□□□ -2.04
ABCD3P28288 Y_RNA.473-201ENST00000384333 102 ntBASIC2.3□□□□□ -2.04
ABCD3P28288 RNU6-160P-201ENST00000384591 107 ntBASIC2.3□□□□□ -2.04
ABCD3P28288 SNORA41-201ENST00000384675 132 ntBASIC2.3□□□□□ -2.04
ABCD3P28288 RNU6-700P-201ENST00000391043 107 ntBASIC2.3□□□□□ -2.04
ABCD3P28288 MTND4LP11-201ENST00000422184 280 ntBASIC2.3□□□□□ -2.04
ABCD3P28288 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.3□□□□□ -2.04
ABCD3P28288 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.3□□□□□ -2.04
ABCD3P28288 SNORA31.11-201ENST00000516528 139 ntBASIC2.3□□□□□ -2.04
ABCD3P28288 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.3□□□□□ -2.04
ABCD3P28288 MIR5701-3-201ENST00000578890 82 ntBASIC2.3□□□□□ -2.04
ABCD3P28288 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.3□□□□□ -2.04
ABCD3P28288 MIR5701-1-201ENST00000585138 82 ntBASIC2.3□□□□□ -2.04
ABCD3P28288 AC025754.2-201ENST00000606491 432 ntBASIC2.3□□□□□ -2.04
ABCD3P28288 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.3□□□□□ -2.04
ABCD3P28288 MIR5701-2-201ENST00000615634 82 ntBASIC2.3□□□□□ -2.04
ABCD3P28288 ZNF204P-201ENST00000416749 2397 ntBASIC2.3□□□□□ -2.04
ABCD3P28288 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ABCD3P28288 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ABCD3P28288 SNORD115-3-201ENST00000363100 82 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 Y_RNA.263-201ENST00000364659 114 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 Y_RNA.384-201ENST00000383909 102 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 Y_RNA.387-201ENST00000383918 102 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 RNU6-1297P-201ENST00000384415 104 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 MIR518C-201ENST00000384822 101 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 RNA5SP465-201ENST00000391195 109 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 RNU4-14P-201ENST00000410858 122 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.29□□□□□ -2.04
ABCD3P28288 MTCYBP10-201ENST00000424905 650 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 MTCO3P8-201ENST00000453691 755 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.29□□□□□ -2.04
ABCD3P28288 FGF7P4-201ENST00000509595 295 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 RNU6-559P-201ENST00000516151 98 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 RNU6-58P-201ENST00000517143 103 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 RNU2-19P-201ENST00000517288 84 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.29□□□□□ -2.04
ABCD3P28288 AC087441.2-201ENST00000529141 262 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 AC027288.2-201ENST00000553028 243 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 AC007229.1-201ENST00000590455 412 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 AC005014.2-201ENST00000607795 599 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 AC133104.2-201ENST00000615272 193 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 AC104260.1-201ENST00000616660 539 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 AC007336.1-201ENST00000576365 3828 ntBASIC2.29□□□□□ -2.04
ABCD3P28288 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ABCD3P28288 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.28□□□□□ -2.04
ABCD3P28288 Y_RNA.48-201ENST00000362710 103 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 Y_RNA.70-201ENST00000362886 110 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 RNY1P16-201ENST00000363063 111 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 RNU6-1188P-201ENST00000363795 107 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 RNU6-280P-201ENST00000364145 104 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 Y_RNA.404-201ENST00000383978 102 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 Y_RNA.405-201ENST00000383979 100 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 Y_RNA.451-201ENST00000384200 100 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 Y_RNA.524-201ENST00000384564 100 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 Y_RNA.561-201ENST00000384694 100 ntBASIC2.28□□□□□ -2.04
ABCD3P28288 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
ABCD3P28288 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms