Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 FTH1P15-201ENST00000406984 280 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 AC074085.1-201ENST00000413598 418 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 VN1R36P-201ENST00000414936 291 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 AF228730.4-201ENST00000421457 183 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.32□□□□□ -2.2
COL5A1P20908 HMGN1P33-201ENST00000432945 451 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 AC010099.1-201ENST00000455434 375 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 RNU7-187P-201ENST00000458985 68 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 RNU7-167P-201ENST00000459160 62 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 HMGN2P26-201ENST00000463169 339 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 FGF7P4-201ENST00000509595 295 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 RNU2-69P-201ENST00000516061 100 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 Y_RNA.718-201ENST00000517110 102 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.32□□□□□ -2.2
COL5A1P20908 AC104576.1-201ENST00000524225 88 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 MIR3942-201ENST00000585264 109 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 AL161798.1-201ENST00000604630 131 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 AC087045.1-201ENST00000605856 382 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.32□□□□□ -2.2
COL5A1P20908 AC100810.6-201ENST00000638068 285 ntBASIC1.32□□□□□ -2.2
COL5A1P20908 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.31□□□□□ -2.2
COL5A1P20908 RNU6-266P-201ENST00000364225 107 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 SNORD14B-201ENST00000364533 90 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
COL5A1P20908 SNORD116-20-201ENST00000384529 92 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 RNA5SP354-201ENST00000391247 136 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
COL5A1P20908 NDUFS5P4-201ENST00000412983 318 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.31□□□□□ -2.2
COL5A1P20908 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.31□□□□□ -2.2
COL5A1P20908 AL365496.1-201ENST00000426885 215 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.31□□□□□ -2.2
COL5A1P20908 SNAP23P1-201ENST00000433229 246 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 AC236972.2-201ENST00000434979 310 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 AC012308.1-201ENST00000451232 178 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 AC013470.1-201ENST00000453438 462 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 RNU7-152P-201ENST00000458982 64 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 U8.21-201ENST00000459536 136 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.31□□□□□ -2.2
COL5A1P20908 RNU6-273P-201ENST00000516937 96 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 CYCSP26-201ENST00000534107 320 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.31□□□□□ -2.2
COL5A1P20908 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.31□□□□□ -2.2
COL5A1P20908 CPDP1-201ENST00000579660 283 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 MIR3117-201ENST00000584034 78 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 AC005261.5-201ENST00000596280 355 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 AC073539.2-201ENST00000597113 165 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 AC002044.1-201ENST00000606707 158 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.31□□□□□ -2.2
COL5A1P20908 AL359697.1-201ENST00000624879 587 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
COL5A1P20908 AP000560.1-201ENST00000624150 1937 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 Y_RNA.11-201ENST00000362375 109 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 RNU6-512P-201ENST00000364438 103 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 RNU6-593P-201ENST00000364716 112 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 RNU6-1280P-201ENST00000365211 107 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 RNU6-234P-201ENST00000365229 104 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 SNORD116-11-201ENST00000383882 92 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 RNU6-767P-201ENST00000384132 107 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 Y_RNA.474-201ENST00000384341 102 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 RNU6-1035P-201ENST00000384477 107 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 Y_RNA.535-201ENST00000384612 99 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
COL5A1P20908 Y_RNA.615-201ENST00000410769 117 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 RNU2-41P-201ENST00000410991 178 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 RPL37P10-201ENST00000412884 288 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 RPL26P27-201ENST00000414397 437 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 BTF3L4P3-201ENST00000418879 476 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 BPY2DP-201ENST00000422208 265 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 AL590383.1-201ENST00000428602 75 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.31□□□□□ -2.2
COL5A1P20908 BTF3P15-201ENST00000455606 336 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 RPL30P5-201ENST00000494923 336 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 RPL39P5-202ENST00000512505 151 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 Y_RNA.702-201ENST00000516843 96 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.31□□□□□ -2.2
COL5A1P20908 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.31□□□□□ -2.2
COL5A1P20908 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.31□□□□□ -2.2
COL5A1P20908 AC010186.2-204ENST00000537668 439 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 NACAP3-201ENST00000552100 481 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.31□□□□□ -2.2
COL5A1P20908 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.31□□□□□ -2.2
COL5A1P20908 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.31□□□□□ -2.2
COL5A1P20908 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.31□□□□□ -2.2
COL5A1P20908 MIR3616-201ENST00000584070 92 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 AC098657.3-201ENST00000620434 263 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 SCARNA4-202ENST00000625402 129 ntBASIC1.31□□□□□ -2.2
COL5A1P20908 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.31□□□□□ -2.2
COL5A1P20908 AC110491.1-201ENST00000562191 2010 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 AP000648.3-201ENST00000623539 4507 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 Y_RNA.33-201ENST00000362591 102 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 RNU6-384P-201ENST00000364900 104 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 Y_RNA.387-201ENST00000383918 102 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 MIR301A-201ENST00000385261 86 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 CYCSP33-201ENST00000414485 327 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 AC007098.1-201ENST00000420122 367 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 MTND1P17-201ENST00000448961 204 ntBASIC1.3□□□□□ -2.2
COL5A1P20908 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms