Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PGBD4P5-201ENST00000445958 426 ntBASIC1.02□□□□□ -2.25
UBCP0CG48 RPS29P28-201ENST00000446439 141 ntBASIC1.02□□□□□ -2.25
UBCP0CG48 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.02□□□□□ -2.25
UBCP0CG48 AL356010.1-201ENST00000456364 102 ntBASIC1.02□□□□□ -2.25
UBCP0CG48 RN7SKP210-201ENST00000459176 261 ntBASIC1.02□□□□□ -2.25
UBCP0CG48 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.02□□□□□ -2.25
UBCP0CG48 RN7SKP88-201ENST00000516847 250 ntBASIC1.02□□□□□ -2.25
UBCP0CG48 RNA5SP404-201ENST00000517118 132 ntBASIC1.02□□□□□ -2.25
UBCP0CG48 MIR3915-201ENST00000578518 97 ntBASIC1.02□□□□□ -2.25
UBCP0CG48 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.02□□□□□ -2.25
UBCP0CG48 AL360219.1-201ENST00000610230 366 ntBASIC1.02□□□□□ -2.25
UBCP0CG48 7SK.8-201ENST00000612110 250 ntBASIC1.02□□□□□ -2.25
UBCP0CG48 7SK.11-201ENST00000615477 250 ntBASIC1.02□□□□□ -2.25
UBCP0CG48 7SK.13-201ENST00000622040 250 ntBASIC1.02□□□□□ -2.25
UBCP0CG48 RNU6-1123P-201ENST00000362347 106 ntBASIC1.01□□□□□ -2.25
UBCP0CG48 snoU2-30.2-201ENST00000362805 70 ntBASIC1.01□□□□□ -2.25
UBCP0CG48 RNU1-17P-201ENST00000363022 152 ntBASIC1.01□□□□□ -2.25
UBCP0CG48 SNORA72.3-201ENST00000365074 132 ntBASIC1.01□□□□□ -2.25
UBCP0CG48 U8.10-201ENST00000384260 133 ntBASIC1.01□□□□□ -2.25
UBCP0CG48 RNU6-975P-201ENST00000384296 105 ntBASIC1.01□□□□□ -2.25
UBCP0CG48 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
UBCP0CG48 RNU2-9P-201ENST00000410194 145 ntBASIC1.01□□□□□ -2.25
UBCP0CG48 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.01□□□□□ -2.25
UBCP0CG48 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.01□□□□□ -2.25
UBCP0CG48 AL365203.2-201ENST00000423444 196 ntBASIC1.01□□□□□ -2.25
UBCP0CG48 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.01□□□□□ -2.25
UBCP0CG48 AL121890.1-201ENST00000435457 205 ntBASIC1.01□□□□□ -2.25
UBCP0CG48 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.01□□□□□ -2.25
UBCP0CG48 snoU13.6-201ENST00000458785 104 ntBASIC1.01□□□□□ -2.25
UBCP0CG48 AC114982.1-201ENST00000469402 321 ntBASIC1.01□□□□□ -2.25
UBCP0CG48 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.01□□□□□ -2.25
UBCP0CG48 RNU6-1146P-201ENST00000516282 102 ntBASIC1.01□□□□□ -2.25
UBCP0CG48 DNAJC19P9-201ENST00000555084 351 ntBASIC1.01□□□□□ -2.25
UBCP0CG48 MIR3664-201ENST00000579074 99 ntBASIC1.01□□□□□ -2.25
UBCP0CG48 AC024933.1-201ENST00000608472 348 ntBASIC1.01□□□□□ -2.25
UBCP0CG48 AC007494.3-201ENST00000624660 743 ntBASIC1.01□□□□□ -2.25
UBCP0CG48 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
UBCP0CG48 RNU1-22P-201ENST00000363334 158 ntBASIC1□□□□□ -2.25
UBCP0CG48 RNU6-457P-201ENST00000363999 107 ntBASIC1□□□□□ -2.25
UBCP0CG48 RNU6-517P-201ENST00000384362 110 ntBASIC1□□□□□ -2.25
UBCP0CG48 RNY3P10-201ENST00000384764 102 ntBASIC1□□□□□ -2.25
UBCP0CG48 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1□□□□□ -2.25
UBCP0CG48 RPS26P42-201ENST00000413485 326 ntBASIC1□□□□□ -2.25
UBCP0CG48 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1□□□□□ -2.25
UBCP0CG48 MTND4P32-201ENST00000437189 1237 ntBASIC1□□□□□ -2.25
UBCP0CG48 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1□□□□□ -2.25
UBCP0CG48 AC009474.2-201ENST00000451383 136 ntBASIC1□□□□□ -2.25
UBCP0CG48 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1□□□□□ -2.25
UBCP0CG48 SNRPGP9-201ENST00000456025 225 ntBASIC1□□□□□ -2.25
UBCP0CG48 RNU7-34P-201ENST00000459394 64 ntBASIC1□□□□□ -2.25
UBCP0CG48 RNU7-138P-201ENST00000459479 64 ntBASIC1□□□□□ -2.25
UBCP0CG48 RNU6-612P-201ENST00000516909 102 ntBASIC1□□□□□ -2.25
UBCP0CG48 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1□□□□□ -2.25
UBCP0CG48 SUB1P2-201ENST00000556401 297 ntBASIC1□□□□□ -2.25
UBCP0CG48 MIR4742-201ENST00000581069 85 ntBASIC1□□□□□ -2.25
UBCP0CG48 HSPE1P19-201ENST00000603327 295 ntBASIC1□□□□□ -2.25
UBCP0CG48 AC025449.1-201ENST00000603896 529 ntBASIC1□□□□□ -2.25
UBCP0CG48 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1□□□□□ -2.25
UBCP0CG48 TCL6_2.1-201ENST00000615162 119 ntBASIC1□□□□□ -2.25
UBCP0CG48 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
UBCP0CG48 RNU6-227P-201ENST00000362865 103 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 RNU6-1120P-201ENST00000362988 108 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 RNA5SP259-201ENST00000365541 109 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 SNORA22-201ENST00000383907 134 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 SNORA29-201ENST00000384183 140 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 SNORA22C-201ENST00000384614 134 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 MT-TH-201ENST00000387441 69 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 MIR1261-201ENST00000408659 82 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 MRPL35P3-201ENST00000421557 364 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 CETN4P-201ENST00000432407 469 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 HMGN2P34-201ENST00000437647 269 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 AC004386.2-201ENST00000441858 148 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.99□□□□□ -2.25
UBCP0CG48 RNU6-1037P-201ENST00000459571 107 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 RPS23P4-201ENST00000487908 423 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 HMGN1P12-201ENST00000499125 195 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.99□□□□□ -2.25
UBCP0CG48 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.99□□□□□ -2.25
UBCP0CG48 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.99□□□□□ -2.25
UBCP0CG48 CENPUP1-201ENST00000526649 1202 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.99□□□□□ -2.25
UBCP0CG48 MIR3908-201ENST00000579798 126 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.99□□□□□ -2.25
UBCP0CG48 MIR5006-201ENST00000583027 110 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 AC104458.1-201ENST00000608243 463 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 AC009509.4-201ENST00000619202 509 ntBASIC0.99□□□□□ -2.25
UBCP0CG48 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
UBCP0CG48 AL390237.1-201ENST00000404226 1415 ntBASIC0.98□□□□□ -2.25
UBCP0CG48 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.98□□□□□ -2.25
UBCP0CG48 SNORA33-201ENST00000363664 130 ntBASIC0.98□□□□□ -2.25
UBCP0CG48 SNORA7.1-201ENST00000363750 139 ntBASIC0.98□□□□□ -2.25
UBCP0CG48 RNU1-124P-201ENST00000363861 145 ntBASIC0.98□□□□□ -2.25
UBCP0CG48 RNU6-968P-201ENST00000384076 107 ntBASIC0.98□□□□□ -2.25
UBCP0CG48 MTND2P18-201ENST00000419962 1030 ntBASIC0.98□□□□□ -2.25
UBCP0CG48 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.98□□□□□ -2.25
UBCP0CG48 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.98□□□□□ -2.25
UBCP0CG48 AC009237.7-201ENST00000447357 229 ntBASIC0.98□□□□□ -2.25
UBCP0CG48 NFU1P2-201ENST00000448700 469 ntBASIC0.98□□□□□ -2.25
UBCP0CG48 AC016717.1-201ENST00000448918 286 ntBASIC0.98□□□□□ -2.25
UBCP0CG48 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms