Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 U6.106-201ENST00000636360 105 ntBASIC4.1□□□□□ -1.75
NEFMP07197 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NEFMP07197 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NEFMP07197 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.1□□□□□ -1.75
NEFMP07197 MAPK10-322ENST00000641485 4530 ntBASIC4.09□□□□□ -1.75
NEFMP07197 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NEFMP07197 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NEFMP07197 RNU6-858P-201ENST00000362436 107 ntBASIC4.09□□□□□ -1.75
NEFMP07197 RNU6-942P-201ENST00000363002 107 ntBASIC4.09□□□□□ -1.75
NEFMP07197 RNU5B-2P-201ENST00000363036 113 ntBASIC4.09□□□□□ -1.75
NEFMP07197 Y_RNA.230-201ENST00000364348 109 ntBASIC4.09□□□□□ -1.75
NEFMP07197 RNU6-47P-201ENST00000383866 107 ntBASIC4.09□□□□□ -1.75
NEFMP07197 AL031121.1-201ENST00000406553 254 ntBASIC4.09□□□□□ -1.75
NEFMP07197 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.09□□□□□ -1.75
NEFMP07197 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.09□□□□□ -1.75
NEFMP07197 AC104332.2-201ENST00000429959 156 ntBASIC4.09□□□□□ -1.75
NEFMP07197 RPL37P4-201ENST00000448908 268 ntBASIC4.09□□□□□ -1.75
NEFMP07197 Y_RNA.638-201ENST00000459374 113 ntBASIC4.09□□□□□ -1.75
NEFMP07197 RPL30P5-201ENST00000494923 336 ntBASIC4.09□□□□□ -1.75
NEFMP07197 AC074198.2-201ENST00000508153 258 ntBASIC4.09□□□□□ -1.75
NEFMP07197 MIR548AI-201ENST00000579940 88 ntBASIC4.09□□□□□ -1.75
NEFMP07197 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.09□□□□□ -1.75
NEFMP07197 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.09□□□□□ -1.75
NEFMP07197 AL138963.2-201ENST00000605137 226 ntBASIC4.09□□□□□ -1.75
NEFMP07197 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NEFMP07197 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NEFMP07197 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.09□□□□□ -1.76
NEFMP07197 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
NEFMP07197 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NEFMP07197 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
NEFMP07197 FTLP6-201ENST00000355274 422 ntBASIC4.08□□□□□ -1.76
NEFMP07197 UBE2WP1-201ENST00000362030 340 ntBASIC4.08□□□□□ -1.76
NEFMP07197 MIR22-201ENST00000362190 85 ntBASIC4.08□□□□□ -1.76
NEFMP07197 MIR410-201ENST00000362222 80 ntBASIC4.08□□□□□ -1.76
NEFMP07197 Y_RNA.170-201ENST00000363746 110 ntBASIC4.08□□□□□ -1.76
NEFMP07197 SNORD32A-201ENST00000364805 84 ntBASIC4.08□□□□□ -1.76
NEFMP07197 RNU6-898P-201ENST00000365627 104 ntBASIC4.08□□□□□ -1.76
NEFMP07197 Y_RNA.570-201ENST00000384750 101 ntBASIC4.08□□□□□ -1.76
NEFMP07197 MIR10B-201ENST00000385011 110 ntBASIC4.08□□□□□ -1.76
NEFMP07197 MIR613-201ENST00000385248 95 ntBASIC4.08□□□□□ -1.76
NEFMP07197 RN7SKP123-201ENST00000410732 291 ntBASIC4.08□□□□□ -1.76
NEFMP07197 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.08□□□□□ -1.76
NEFMP07197 AC022018.1-201ENST00000430685 241 ntBASIC4.08□□□□□ -1.76
NEFMP07197 RPS29P26-201ENST00000477483 171 ntBASIC4.08□□□□□ -1.76
NEFMP07197 SNORA31.1-201ENST00000515993 133 ntBASIC4.08□□□□□ -1.76
NEFMP07197 SNORA31.5-201ENST00000516190 133 ntBASIC4.08□□□□□ -1.76
NEFMP07197 RNU1-103P-201ENST00000516502 125 ntBASIC4.08□□□□□ -1.76
NEFMP07197 RNU6-1282P-201ENST00000516735 96 ntBASIC4.08□□□□□ -1.76
NEFMP07197 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.08□□□□□ -1.76
NEFMP07197 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.08□□□□□ -1.76
NEFMP07197 MIR5695-201ENST00000579717 85 ntBASIC4.08□□□□□ -1.76
NEFMP07197 FTX_3.1-201ENST00000610451 147 ntBASIC4.08□□□□□ -1.76
NEFMP07197 AC021753.1-201ENST00000635724 168 ntBASIC4.08□□□□□ -1.76
NEFMP07197 AC000403.1-201ENST00000613696 3585 ntBASIC4.08□□□□□ -1.76
NEFMP07197 AC022336.2-201ENST00000568966 2538 ntBASIC4.07□□□□□ -1.76
NEFMP07197 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.07□□□□□ -1.76
NEFMP07197 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
NEFMP07197 Y_RNA.233-201ENST00000364407 101 ntBASIC4.07□□□□□ -1.76
NEFMP07197 RNU1-140P-201ENST00000365040 165 ntBASIC4.07□□□□□ -1.76
NEFMP07197 RNU6-217P-201ENST00000384164 104 ntBASIC4.07□□□□□ -1.76
NEFMP07197 U8.10-201ENST00000384260 133 ntBASIC4.07□□□□□ -1.76
NEFMP07197 MIR325-201ENST00000385260 98 ntBASIC4.07□□□□□ -1.76
NEFMP07197 SNORD67-201ENST00000390833 111 ntBASIC4.07□□□□□ -1.76
NEFMP07197 RNU6-1197P-201ENST00000391183 107 ntBASIC4.07□□□□□ -1.76
NEFMP07197 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.07□□□□□ -1.76
NEFMP07197 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.07□□□□□ -1.76
NEFMP07197 HMGN2P30-201ENST00000423237 256 ntBASIC4.07□□□□□ -1.76
NEFMP07197 AL512844.2-201ENST00000433990 593 ntBASIC4.07□□□□□ -1.76
NEFMP07197 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.07□□□□□ -1.76
NEFMP07197 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.07□□□□□ -1.76
NEFMP07197 AC091959.1-201ENST00000495857 238 ntBASIC4.07□□□□□ -1.76
NEFMP07197 AC091874.1-201ENST00000511402 339 ntBASIC4.07□□□□□ -1.76
NEFMP07197 AC008885.1-201ENST00000514930 301 ntBASIC4.07□□□□□ -1.76
NEFMP07197 RNU6-567P-201ENST00000516746 107 ntBASIC4.07□□□□□ -1.76
NEFMP07197 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
NEFMP07197 AC011921.3-201ENST00000605540 361 ntBASIC4.07□□□□□ -1.76
NEFMP07197 U2.21-201ENST00000637295 81 ntBASIC4.07□□□□□ -1.76
NEFMP07197 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NEFMP07197 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC4.06□□□□□ -1.76
NEFMP07197 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
NEFMP07197 AC090740.1-201ENST00000623193 2262 ntBASIC4.06□□□□□ -1.76
NEFMP07197 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NEFMP07197 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.06□□□□□ -1.76
NEFMP07197 RNU6-626P-201ENST00000363354 107 ntBASIC4.06□□□□□ -1.76
NEFMP07197 Y_RNA.136-201ENST00000363444 102 ntBASIC4.06□□□□□ -1.76
NEFMP07197 Y_RNA.240-201ENST00000364469 95 ntBASIC4.06□□□□□ -1.76
NEFMP07197 SNORA14A-201ENST00000364773 135 ntBASIC4.06□□□□□ -1.76
NEFMP07197 SNORD50.2-201ENST00000365465 70 ntBASIC4.06□□□□□ -1.76
NEFMP07197 CD24P4-201ENST00000382840 243 ntBASIC4.06□□□□□ -1.76
NEFMP07197 RNU6-281P-201ENST00000384212 103 ntBASIC4.06□□□□□ -1.76
NEFMP07197 SNORD116-20-201ENST00000384529 92 ntBASIC4.06□□□□□ -1.76
NEFMP07197 RNU6-159P-201ENST00000391080 106 ntBASIC4.06□□□□□ -1.76
NEFMP07197 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.06□□□□□ -1.76
NEFMP07197 AC091021.1-201ENST00000468051 388 ntBASIC4.06□□□□□ -1.76
NEFMP07197 RPS29P2-201ENST00000479278 136 ntBASIC4.06□□□□□ -1.76
NEFMP07197 AC097462.2-201ENST00000504623 481 ntBASIC4.06□□□□□ -1.76
NEFMP07197 AC022559.1-201ENST00000520905 205 ntBASIC4.06□□□□□ -1.76
NEFMP07197 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.06□□□□□ -1.76
NEFMP07197 MIR5571-201ENST00000577998 113 ntBASIC4.06□□□□□ -1.76
NEFMP07197 AC019159.1-201ENST00000605094 187 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 234.6 ms