Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MTND4LP18-201ENST00000526864 291 ntBASIC0.47□□□□□ -2.33
TPM3P06753 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.47□□□□□ -2.33
TPM3P06753 MIR4498-201ENST00000577599 66 ntBASIC0.47□□□□□ -2.33
TPM3P06753 AC080078.2-201ENST00000603766 501 ntBASIC0.47□□□□□ -2.33
TPM3P06753 AC104458.1-201ENST00000608243 463 ntBASIC0.47□□□□□ -2.33
TPM3P06753 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.47□□□□□ -2.33
TPM3P06753 AL513423.1-201ENST00000621695 132 ntBASIC0.47□□□□□ -2.33
TPM3P06753 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
TPM3P06753 RNY1P10-201ENST00000363268 113 ntBASIC0.46□□□□□ -2.34
TPM3P06753 RNU6-975P-201ENST00000384296 105 ntBASIC0.46□□□□□ -2.34
TPM3P06753 Y_RNA.576-201ENST00000384781 102 ntBASIC0.46□□□□□ -2.34
TPM3P06753 RNA5SP323-201ENST00000391094 133 ntBASIC0.46□□□□□ -2.34
TPM3P06753 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.46□□□□□ -2.34
TPM3P06753 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.46□□□□□ -2.34
TPM3P06753 AL133217.1-201ENST00000450980 425 ntBASIC0.46□□□□□ -2.34
TPM3P06753 RNU7-21P-201ENST00000459430 62 ntBASIC0.46□□□□□ -2.34
TPM3P06753 MTND2P31-201ENST00000512602 616 ntBASIC0.46□□□□□ -2.34
TPM3P06753 RNA5SP102-201ENST00000516865 106 ntBASIC0.46□□□□□ -2.34
TPM3P06753 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
TPM3P06753 AL603839.4-201ENST00000624658 1005 ntBASIC0.46□□□□□ -2.34
TPM3P06753 AL445984.1-201ENST00000637834 659 ntBASIC0.46□□□□□ -2.34
TPM3P06753 MIR96-201ENST00000362288 78 ntBASIC0.45□□□□□ -2.34
TPM3P06753 RNU4-76P-201ENST00000364509 141 ntBASIC0.45□□□□□ -2.34
TPM3P06753 RNU1-93P-201ENST00000364704 169 ntBASIC0.45□□□□□ -2.34
TPM3P06753 RNU6-116P-201ENST00000384042 109 ntBASIC0.45□□□□□ -2.34
TPM3P06753 MIR653-201ENST00000385279 96 ntBASIC0.45□□□□□ -2.34
TPM3P06753 RNA5SP467-201ENST00000391274 118 ntBASIC0.45□□□□□ -2.34
TPM3P06753 RNU6-321P-201ENST00000410912 106 ntBASIC0.45□□□□□ -2.34
TPM3P06753 AL117339.3-201ENST00000418733 162 ntBASIC0.45□□□□□ -2.34
TPM3P06753 AC090960.1-201ENST00000421072 306 ntBASIC0.45□□□□□ -2.34
TPM3P06753 AC012306.1-201ENST00000423267 114 ntBASIC0.45□□□□□ -2.34
TPM3P06753 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.45□□□□□ -2.34
TPM3P06753 AC244023.1-201ENST00000426884 112 ntBASIC0.45□□□□□ -2.34
TPM3P06753 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.45□□□□□ -2.34
TPM3P06753 AC010486.2-201ENST00000505572 483 ntBASIC0.45□□□□□ -2.34
TPM3P06753 LRRC34P2-201ENST00000514850 553 ntBASIC0.45□□□□□ -2.34
TPM3P06753 AP003181.2-201ENST00000528941 181 ntBASIC0.45□□□□□ -2.34
TPM3P06753 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.45□□□□□ -2.34
TPM3P06753 AC007834.2-201ENST00000536310 343 ntBASIC0.45□□□□□ -2.34
TPM3P06753 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.45□□□□□ -2.34
TPM3P06753 AC242498.1-201ENST00000604134 111 ntBASIC0.45□□□□□ -2.34
TPM3P06753 AL031775.1-201ENST00000607014 887 ntBASIC0.45□□□□□ -2.34
TPM3P06753 AC243994.1-201ENST00000618627 109 ntBASIC0.45□□□□□ -2.34
TPM3P06753 AL359697.1-201ENST00000624879 587 ntBASIC0.45□□□□□ -2.34
TPM3P06753 SNORA43.4-201ENST00000629559 138 ntBASIC0.45□□□□□ -2.34
TPM3P06753 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.45□□□□□ -2.34
TPM3P06753 ELL2P3-201ENST00000457883 1602 ntBASIC0.45□□□□□ -2.34
TPM3P06753 RNA5SP347-201ENST00000362445 119 ntBASIC0.44□□□□□ -2.34
TPM3P06753 RNU6-945P-201ENST00000383947 107 ntBASIC0.44□□□□□ -2.34
TPM3P06753 RNU6-533P-201ENST00000384144 107 ntBASIC0.44□□□□□ -2.34
TPM3P06753 FABP5P4-201ENST00000437203 171 ntBASIC0.44□□□□□ -2.34
TPM3P06753 RPEP5-201ENST00000441137 268 ntBASIC0.44□□□□□ -2.34
TPM3P06753 AC113410.1-201ENST00000505029 247 ntBASIC0.44□□□□□ -2.34
TPM3P06753 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.44□□□□□ -2.34
TPM3P06753 RNU6-947P-201ENST00000516264 106 ntBASIC0.44□□□□□ -2.34
TPM3P06753 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.44□□□□□ -2.34
TPM3P06753 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.44□□□□□ -2.34
TPM3P06753 AC022217.4-201ENST00000604389 163 ntBASIC0.44□□□□□ -2.34
TPM3P06753 AC012557.2-201ENST00000605919 418 ntBASIC0.44□□□□□ -2.34
TPM3P06753 MIR8054-201ENST00000620877 86 ntBASIC0.44□□□□□ -2.34
TPM3P06753 CASC19-280ENST00000642102 1351 ntBASIC0.44□□□□□ -2.34
TPM3P06753 U3.8-201ENST00000363675 217 ntBASIC0.43□□□□□ -2.34
TPM3P06753 RNU6-1303P-201ENST00000364841 107 ntBASIC0.43□□□□□ -2.34
TPM3P06753 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
TPM3P06753 RNU6-1093P-201ENST00000391194 107 ntBASIC0.43□□□□□ -2.34
TPM3P06753 RNU2-8P-201ENST00000410727 190 ntBASIC0.43□□□□□ -2.34
TPM3P06753 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.43□□□□□ -2.34
TPM3P06753 MTCO2P21-201ENST00000419780 677 ntBASIC0.43□□□□□ -2.34
TPM3P06753 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.43□□□□□ -2.34
TPM3P06753 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.43□□□□□ -2.34
TPM3P06753 RNU7-90P-201ENST00000459216 62 ntBASIC0.43□□□□□ -2.34
TPM3P06753 HMGB1P29-201ENST00000505659 499 ntBASIC0.43□□□□□ -2.34
TPM3P06753 HSPE1P23-201ENST00000509838 286 ntBASIC0.43□□□□□ -2.34
TPM3P06753 RNU6-1069P-201ENST00000516612 133 ntBASIC0.43□□□□□ -2.34
TPM3P06753 AL359999.1-201ENST00000604513 294 ntBASIC0.43□□□□□ -2.34
TPM3P06753 MIR6715A-201ENST00000615929 79 ntBASIC0.43□□□□□ -2.34
TPM3P06753 AC006001.4-201ENST00000622243 395 ntBASIC0.43□□□□□ -2.34
TPM3P06753 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.43□□□□□ -2.34
TPM3P06753 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.43□□□□□ -2.34
TPM3P06753 SNORD115-7-201ENST00000365306 82 ntBASIC0.42□□□□□ -2.34
TPM3P06753 MIR660-201ENST00000385235 97 ntBASIC0.42□□□□□ -2.34
TPM3P06753 SNORA12.1-201ENST00000390873 148 ntBASIC0.42□□□□□ -2.34
TPM3P06753 MRPL42P2-201ENST00000403169 426 ntBASIC0.42□□□□□ -2.34
TPM3P06753 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.42□□□□□ -2.34
TPM3P06753 AC092628.1-201ENST00000436250 252 ntBASIC0.42□□□□□ -2.34
TPM3P06753 AC116562.3-201ENST00000506136 177 ntBASIC0.42□□□□□ -2.34
TPM3P06753 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.42□□□□□ -2.34
TPM3P06753 AC068587.5-201ENST00000528506 175 ntBASIC0.42□□□□□ -2.34
TPM3P06753 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
TPM3P06753 AL391840.1-201ENST00000571144 367 ntBASIC0.42□□□□□ -2.34
TPM3P06753 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.42□□□□□ -2.34
TPM3P06753 Z99497.2-201ENST00000603634 310 ntBASIC0.42□□□□□ -2.34
TPM3P06753 AC104010.1-201ENST00000616889 150 ntBASIC0.42□□□□□ -2.34
TPM3P06753 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.42□□□□□ -2.34
TPM3P06753 U6.108-201ENST00000637764 58 ntBASIC0.42□□□□□ -2.34
TPM3P06753 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
TPM3P06753 RNA5SP499-201ENST00000363982 119 ntBASIC0.41□□□□□ -2.34
TPM3P06753 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
TPM3P06753 MIR549A-201ENST00000385268 96 ntBASIC0.41□□□□□ -2.34
TPM3P06753 MIR1253-201ENST00000408273 105 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 405.3 ms