Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNY3-201ENST00000365484 102 ntBASIC2.13□□□□□ -2.07
VTNP04004 RNU6-968P-201ENST00000384076 107 ntBASIC2.13□□□□□ -2.07
VTNP04004 Y_RNA.474-201ENST00000384341 102 ntBASIC2.13□□□□□ -2.07
VTNP04004 Y_RNA.490-201ENST00000384413 102 ntBASIC2.13□□□□□ -2.07
VTNP04004 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
VTNP04004 SNORA26.9-201ENST00000391322 122 ntBASIC2.13□□□□□ -2.07
VTNP04004 AIMP1P2-201ENST00000425294 312 ntBASIC2.13□□□□□ -2.07
VTNP04004 AC078809.1-201ENST00000427601 140 ntBASIC2.13□□□□□ -2.07
VTNP04004 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.13□□□□□ -2.07
VTNP04004 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.13□□□□□ -2.07
VTNP04004 WARS2P1-201ENST00000429678 537 ntBASIC2.13□□□□□ -2.07
VTNP04004 AC007677.1-201ENST00000445757 515 ntBASIC2.13□□□□□ -2.07
VTNP04004 RPL23AP7-203ENST00000449021 469 ntBASIC2.13□□□□□ -2.07
VTNP04004 AL353752.1-201ENST00000454946 260 ntBASIC2.13□□□□□ -2.07
VTNP04004 CYP2C59P-201ENST00000457790 269 ntBASIC2.13□□□□□ -2.07
VTNP04004 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.13□□□□□ -2.07
VTNP04004 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.13□□□□□ -2.07
VTNP04004 RPL23AP63-201ENST00000498752 471 ntBASIC2.13□□□□□ -2.07
VTNP04004 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.13□□□□□ -2.07
VTNP04004 AC026782.1-201ENST00000512952 449 ntBASIC2.13□□□□□ -2.07
VTNP04004 Y_RNA.670-201ENST00000516255 105 ntBASIC2.13□□□□□ -2.07
VTNP04004 RNA5SP82-201ENST00000516707 92 ntBASIC2.13□□□□□ -2.07
VTNP04004 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.13□□□□□ -2.07
VTNP04004 AC093027.1-201ENST00000546698 429 ntBASIC2.13□□□□□ -2.07
VTNP04004 IMMP1LP2-201ENST00000552954 492 ntBASIC2.13□□□□□ -2.07
VTNP04004 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.13□□□□□ -2.07
VTNP04004 AL356157.2-201ENST00000605122 111 ntBASIC2.13□□□□□ -2.07
VTNP04004 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.13□□□□□ -2.07
VTNP04004 MTND4LP32-201ENST00000636111 270 ntBASIC2.13□□□□□ -2.07
VTNP04004 AC233981.2-201ENST00000611524 1614 ntBASIC2.13□□□□□ -2.07
VTNP04004 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
VTNP04004 RNU4-73P-201ENST00000363164 141 ntBASIC2.12□□□□□ -2.07
VTNP04004 RNU6-842P-201ENST00000384269 107 ntBASIC2.12□□□□□ -2.07
VTNP04004 RNU6-331P-201ENST00000384724 107 ntBASIC2.12□□□□□ -2.07
VTNP04004 SNORA75.4-201ENST00000391278 119 ntBASIC2.12□□□□□ -2.07
VTNP04004 AL590556.1-201ENST00000423231 483 ntBASIC2.12□□□□□ -2.07
VTNP04004 RPL23AP95-201ENST00000426806 265 ntBASIC2.12□□□□□ -2.07
VTNP04004 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.12□□□□□ -2.07
VTNP04004 AL139109.1-201ENST00000455491 297 ntBASIC2.12□□□□□ -2.07
VTNP04004 RPL30P15-201ENST00000457129 321 ntBASIC2.12□□□□□ -2.07
VTNP04004 AC068781.1-201ENST00000488231 618 ntBASIC2.12□□□□□ -2.07
VTNP04004 HMGB1P35-201ENST00000503360 598 ntBASIC2.12□□□□□ -2.07
VTNP04004 RNU6-277P-201ENST00000516272 106 ntBASIC2.12□□□□□ -2.07
VTNP04004 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.12□□□□□ -2.07
VTNP04004 RAB11AP2-201ENST00000545905 639 ntBASIC2.12□□□□□ -2.07
VTNP04004 MIR4795-201ENST00000584182 89 ntBASIC2.12□□□□□ -2.07
VTNP04004 AC002984.1-201ENST00000591692 448 ntBASIC2.12□□□□□ -2.07
VTNP04004 SNORD14A-201ENST00000606526 91 ntBASIC2.12□□□□□ -2.07
VTNP04004 U4atac.1-201ENST00000618345 95 ntBASIC2.12□□□□□ -2.07
VTNP04004 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.12□□□□□ -2.07
VTNP04004 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VTNP04004 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VTNP04004 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
VTNP04004 AC092268.1-201ENST00000342691 405 ntBASIC2.11□□□□□ -2.07
VTNP04004 SNORD50.1-201ENST00000362987 71 ntBASIC2.11□□□□□ -2.07
VTNP04004 RNU6-593P-201ENST00000364716 112 ntBASIC2.11□□□□□ -2.07
VTNP04004 SNORA67.1-201ENST00000364749 141 ntBASIC2.11□□□□□ -2.07
VTNP04004 Y_RNA.387-201ENST00000383918 102 ntBASIC2.11□□□□□ -2.07
VTNP04004 CBX3P9-201ENST00000402326 552 ntBASIC2.11□□□□□ -2.07
VTNP04004 RN7SKP61-201ENST00000410642 295 ntBASIC2.11□□□□□ -2.07
VTNP04004 RNA5SP494-201ENST00000410653 129 ntBASIC2.11□□□□□ -2.07
VTNP04004 HMGB3P2-201ENST00000411913 584 ntBASIC2.11□□□□□ -2.07
VTNP04004 EIF1AXP1-201ENST00000419267 435 ntBASIC2.11□□□□□ -2.07
VTNP04004 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.11□□□□□ -2.07
VTNP04004 snoU13.6-201ENST00000458785 104 ntBASIC2.11□□□□□ -2.07
VTNP04004 SNORD5.1-201ENST00000458800 75 ntBASIC2.11□□□□□ -2.07
VTNP04004 snoU13.14-201ENST00000459372 104 ntBASIC2.11□□□□□ -2.07
VTNP04004 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.11□□□□□ -2.07
VTNP04004 MTND3P22-201ENST00000510932 243 ntBASIC2.11□□□□□ -2.07
VTNP04004 RNA5SP182-201ENST00000516064 82 ntBASIC2.11□□□□□ -2.07
VTNP04004 RNU6-586P-201ENST00000517265 104 ntBASIC2.11□□□□□ -2.07
VTNP04004 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.11□□□□□ -2.07
VTNP04004 FGF7P1-201ENST00000582820 288 ntBASIC2.11□□□□□ -2.07
VTNP04004 MIR5690-201ENST00000583739 73 ntBASIC2.11□□□□□ -2.07
VTNP04004 AL355297.2-201ENST00000604792 129 ntBASIC2.11□□□□□ -2.07
VTNP04004 AL034555.1-201ENST00000604816 211 ntBASIC2.11□□□□□ -2.07
VTNP04004 AP000654.2-201ENST00000605633 586 ntBASIC2.11□□□□□ -2.07
VTNP04004 AL353997.5-201ENST00000618886 171 ntBASIC2.11□□□□□ -2.07
VTNP04004 SNORA43.4-201ENST00000629559 138 ntBASIC2.11□□□□□ -2.07
VTNP04004 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.11□□□□□ -2.07
VTNP04004 Z82209.1-201ENST00000422141 2135 ntBASIC2.11□□□□□ -2.07
VTNP04004 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
VTNP04004 KPNA2P1-201ENST00000458289 1591 ntBASIC2.1□□□□□ -2.07
VTNP04004 MTND5P9-201ENST00000503854 1755 ntBASIC2.1□□□□□ -2.07
VTNP04004 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.1□□□□□ -2.07
VTNP04004 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.1□□□□□ -2.07
VTNP04004 Y_RNA.259-201ENST00000364619 101 ntBASIC2.1□□□□□ -2.07
VTNP04004 Y_RNA.404-201ENST00000383978 102 ntBASIC2.1□□□□□ -2.07
VTNP04004 SNORA29-201ENST00000384183 140 ntBASIC2.1□□□□□ -2.07
VTNP04004 RNU6-1297P-201ENST00000384415 104 ntBASIC2.1□□□□□ -2.07
VTNP04004 Y_RNA.533-201ENST00000384596 114 ntBASIC2.1□□□□□ -2.07
VTNP04004 MT-TD-201ENST00000387419 68 ntBASIC2.1□□□□□ -2.07
VTNP04004 RNU6-482P-201ENST00000391068 107 ntBASIC2.1□□□□□ -2.07
VTNP04004 MTCYBP4-201ENST00000401524 249 ntBASIC2.1□□□□□ -2.07
VTNP04004 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.1□□□□□ -2.07
VTNP04004 AL161788.1-201ENST00000441805 169 ntBASIC2.1□□□□□ -2.07
VTNP04004 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.1□□□□□ -2.07
VTNP04004 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.1□□□□□ -2.07
VTNP04004 AC025033.1-201ENST00000463883 194 ntBASIC2.1□□□□□ -2.07
VTNP04004 AC021146.2-201ENST00000504736 556 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms