Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 ZNF209P-201ENST00000593450 2304 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
MT-ND4P03905 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
MT-ND4P03905 Y_RNA.1-201ENST00000352915 104 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 RNU1-17P-201ENST00000363022 152 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 RNU6-877P-201ENST00000383868 107 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 RNU6-418P-201ENST00000384035 107 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 MIR520A-201ENST00000384862 85 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 RNU6-1106P-201ENST00000390845 107 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.1□□□□□ -2.23
MT-ND4P03905 AC245517.4-201ENST00000448601 281 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.1□□□□□ -2.23
MT-ND4P03905 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.1□□□□□ -2.23
MT-ND4P03905 RPS29P29-201ENST00000456396 171 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 TPTE2P5-203ENST00000458118 728 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 RNU6-1037P-201ENST00000459571 107 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 MTCO3P38-201ENST00000468910 766 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 RPL31P58-201ENST00000469001 379 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 HMGN2P9-201ENST00000476875 229 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 MTCYBP18-201ENST00000501056 747 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.1□□□□□ -2.23
MT-ND4P03905 RNA5SP445-201ENST00000515889 115 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 RNU6-1041P-201ENST00000516254 102 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 OSBPL9P5-201ENST00000542581 171 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 AL118558.2-201ENST00000556294 238 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 AC008088.1-201ENST00000580993 280 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 Z99497.2-201ENST00000603634 310 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 AC095038.3-201ENST00000634439 195 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
MT-ND4P03905 AC010615.1-201ENST00000594254 1764 ntBASIC1.1□□□□□ -2.23
MT-ND4P03905 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
MT-ND4P03905 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.23
MT-ND4P03905 RNU6-227P-201ENST00000362865 103 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 Y_RNA.132-201ENST00000363421 102 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 SNORA29-201ENST00000384183 140 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 SNORD116-8-201ENST00000384365 95 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 AL117342.1-201ENST00000404861 406 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 AL663109.1-201ENST00000411498 844 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 MTCO1P21-201ENST00000416634 589 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 ARL5AP1-201ENST00000418991 388 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 AC060773.1-201ENST00000421698 310 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 MTND3P9-201ENST00000429526 346 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 TOMM22P2-201ENST00000430735 237 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 AL591806.2-201ENST00000433122 173 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 MTND1P26-201ENST00000440488 538 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 JTBP1-201ENST00000441314 247 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 MTCO1P19-201ENST00000443487 500 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 RNU1-123P-201ENST00000458950 160 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 RPS3AP17-201ENST00000472594 777 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 HMGB1P29-201ENST00000505659 499 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 AC108078.1-201ENST00000508073 725 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.09□□□□□ -2.23
MT-ND4P03905 AC025465.4-201ENST00000513422 638 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 RNU6-189P-201ENST00000516120 101 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 SNORD60.2-201ENST00000516883 86 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 RNU6-856P-201ENST00000516959 98 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.09□□□□□ -2.23
MT-ND4P03905 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.09□□□□□ -2.23
MT-ND4P03905 AP005136.1-201ENST00000579765 429 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 MIR3976-201ENST00000606807 139 ntBASIC1.09□□□□□ -2.23
MT-ND4P03905 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.09□□□□□ -2.23
MT-ND4P03905 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.08□□□□□ -2.24
MT-ND4P03905 AC100821.1-201ENST00000523153 2479 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.08□□□□□ -2.24
MT-ND4P03905 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.08□□□□□ -2.24
MT-ND4P03905 MIR302D-201ENST00000362275 68 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 RNU6-562P-201ENST00000362731 107 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 RNU6-457P-201ENST00000363999 107 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 RNU1-96P-201ENST00000364163 162 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 Y_RNA.296-201ENST00000364930 108 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 Y_RNA.553-201ENST00000384670 102 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 RNU6-360P-201ENST00000390944 104 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 AC090960.1-201ENST00000421072 306 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.08□□□□□ -2.24
MT-ND4P03905 AC079140.3-201ENST00000511111 550 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 RN7SKP298-201ENST00000515950 94 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 SNORA40.12-201ENST00000516329 111 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 RNU6-1069P-201ENST00000516612 133 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 AC104576.1-201ENST00000524225 88 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 CENPUP1-201ENST00000526649 1202 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.08□□□□□ -2.24
MT-ND4P03905 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.08□□□□□ -2.24
MT-ND4P03905 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.08□□□□□ -2.24
MT-ND4P03905 AC084364.2-201ENST00000546924 395 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.08□□□□□ -2.24
MT-ND4P03905 AC025423.5-201ENST00000550230 219 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 AL161670.1-201ENST00000554348 137 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 AC019288.1-201ENST00000557918 224 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 MTND3P12-201ENST00000559068 328 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.08□□□□□ -2.24
MT-ND4P03905 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.08□□□□□ -2.24
MT-ND4P03905 AC005668.1-201ENST00000571142 476 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 AC016727.2-201ENST00000603988 621 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 AC103705.1-201ENST00000619013 241 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 MIR8063-201ENST00000621930 81 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 AC078883.4-201ENST00000623218 367 ntBASIC1.08□□□□□ -2.24
MT-ND4P03905 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms