Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 RNU6-1280P-201ENST00000365211 107 ntBASIC2.88□□□□□ -1.95
TOP3BO95985 Y_RNA.416-201ENST00000384014 113 ntBASIC2.88□□□□□ -1.95
TOP3BO95985 MIR215-201ENST00000384858 110 ntBASIC2.88□□□□□ -1.95
TOP3BO95985 MIR548H3-201ENST00000408771 118 ntBASIC2.88□□□□□ -1.95
TOP3BO95985 AL590135.1-201ENST00000422215 156 ntBASIC2.88□□□□□ -1.95
TOP3BO95985 AC104332.2-201ENST00000429959 156 ntBASIC2.88□□□□□ -1.95
TOP3BO95985 RNU7-87P-201ENST00000459343 62 ntBASIC2.88□□□□□ -1.95
TOP3BO95985 RNU7-23P-201ENST00000459465 62 ntBASIC2.88□□□□□ -1.95
TOP3BO95985 RNU6-138P-201ENST00000515952 107 ntBASIC2.88□□□□□ -1.95
TOP3BO95985 SNORA31.18-201ENST00000517043 134 ntBASIC2.88□□□□□ -1.95
TOP3BO95985 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
TOP3BO95985 AC021739.1-201ENST00000559631 174 ntBASIC2.88□□□□□ -1.95
TOP3BO95985 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.88□□□□□ -1.95
TOP3BO95985 AC060766.3-201ENST00000591442 263 ntBASIC2.88□□□□□ -1.95
TOP3BO95985 RPL23AP78-201ENST00000599928 470 ntBASIC2.88□□□□□ -1.95
TOP3BO95985 U6.92-201ENST00000636464 89 ntBASIC2.88□□□□□ -1.95
TOP3BO95985 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.88□□□□□ -1.95
TOP3BO95985 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TOP3BO95985 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TOP3BO95985 AC010680.1-201ENST00000590024 3590 ntBASIC2.87□□□□□ -1.95
TOP3BO95985 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.87□□□□□ -1.95
TOP3BO95985 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TOP3BO95985 Y_RNA.117-201ENST00000363294 101 ntBASIC2.87□□□□□ -1.95
TOP3BO95985 RNU6-799P-201ENST00000363567 107 ntBASIC2.87□□□□□ -1.95
TOP3BO95985 SNORD27-201ENST00000363981 72 ntBASIC2.87□□□□□ -1.95
TOP3BO95985 Y_RNA.238-201ENST00000364441 102 ntBASIC2.87□□□□□ -1.95
TOP3BO95985 RNU6-200P-201ENST00000364743 107 ntBASIC2.87□□□□□ -1.95
TOP3BO95985 SNORD115-46-201ENST00000390982 71 ntBASIC2.87□□□□□ -1.95
TOP3BO95985 AP000275.1-201ENST00000411943 390 ntBASIC2.87□□□□□ -1.95
TOP3BO95985 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.87□□□□□ -1.95
TOP3BO95985 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.87□□□□□ -1.95
TOP3BO95985 AC096920.1-201ENST00000423991 241 ntBASIC2.87□□□□□ -1.95
TOP3BO95985 MTND2P29-201ENST00000438595 412 ntBASIC2.87□□□□□ -1.95
TOP3BO95985 RN7SL499P-201ENST00000481141 276 ntBASIC2.87□□□□□ -1.95
TOP3BO95985 AC083906.5-201ENST00000503722 328 ntBASIC2.87□□□□□ -1.95
TOP3BO95985 RNU7-175P-201ENST00000515915 61 ntBASIC2.87□□□□□ -1.95
TOP3BO95985 RNU6-581P-201ENST00000516214 105 ntBASIC2.87□□□□□ -1.95
TOP3BO95985 SNORA43.2-201ENST00000516652 128 ntBASIC2.87□□□□□ -1.95
TOP3BO95985 Y_RNA.706-201ENST00000516933 99 ntBASIC2.87□□□□□ -1.95
TOP3BO95985 AP002770.2-201ENST00000543613 532 ntBASIC2.87□□□□□ -1.95
TOP3BO95985 AC024153.1-201ENST00000603103 365 ntBASIC2.87□□□□□ -1.95
TOP3BO95985 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.87□□□□□ -1.95
TOP3BO95985 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.87□□□□□ -1.95
TOP3BO95985 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
TOP3BO95985 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.86□□□□□ -1.95
TOP3BO95985 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TOP3BO95985 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 MIR335-201ENST00000362173 94 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 snoU2_19.2-201ENST00000363024 80 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 U8.2-201ENST00000363156 134 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 RNU6-105P-201ENST00000363909 104 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 RNA5SP139-201ENST00000364340 117 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 Y_RNA.237-201ENST00000364439 102 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 RNU1-100P-201ENST00000365255 165 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 CD24P4-201ENST00000382840 243 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 RNU6-1027P-201ENST00000383998 107 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 Y_RNA.439-201ENST00000384119 94 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 RNY3P4-201ENST00000384428 101 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 BTF3L4P2-201ENST00000392798 346 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.86□□□□□ -1.95
TOP3BO95985 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.86□□□□□ -1.95
TOP3BO95985 AC004383.1-201ENST00000438135 289 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 AL513328.1-201ENST00000446460 224 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.86□□□□□ -1.95
TOP3BO95985 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.86□□□□□ -1.95
TOP3BO95985 U8.22-201ENST00000459141 133 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 snoU13.15-201ENST00000459407 104 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.86□□□□□ -1.95
TOP3BO95985 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.86□□□□□ -1.95
TOP3BO95985 Y_RNA.713-201ENST00000517013 96 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 MIR2355-201ENST00000517199 87 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 AC010186.2-204ENST00000537668 439 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 AC093023.1-201ENST00000547375 507 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 AC136932.1-201ENST00000574771 208 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 SNORD53-201ENST00000579969 78 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 MIR4300-201ENST00000581016 96 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 AC010900.2-201ENST00000604508 210 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 AC098479.1-201ENST00000609225 154 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 MIR376A1-201ENST00000616574 68 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 AC064859.1-201ENST00000624741 174 ntBASIC2.86□□□□□ -1.95
TOP3BO95985 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
TOP3BO95985 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.85□□□□□ -1.95
TOP3BO95985 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TOP3BO95985 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
TOP3BO95985 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
TOP3BO95985 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TOP3BO95985 RNU6-942P-201ENST00000363002 107 ntBASIC2.85□□□□□ -1.95
TOP3BO95985 RNU6-527P-201ENST00000363425 104 ntBASIC2.85□□□□□ -1.95
TOP3BO95985 RNU6-338P-201ENST00000383888 105 ntBASIC2.85□□□□□ -1.95
TOP3BO95985 Y_RNA.539-201ENST00000384635 107 ntBASIC2.85□□□□□ -1.95
TOP3BO95985 MIR764-201ENST00000390811 85 ntBASIC2.85□□□□□ -1.95
TOP3BO95985 SNORA26.7-201ENST00000391288 122 ntBASIC2.85□□□□□ -1.95
TOP3BO95985 AL358453.1-201ENST00000422522 250 ntBASIC2.85□□□□□ -1.95
TOP3BO95985 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.85□□□□□ -1.95
TOP3BO95985 MTND5P15-201ENST00000434246 349 ntBASIC2.85□□□□□ -1.95
TOP3BO95985 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.85□□□□□ -1.95
TOP3BO95985 RPS15AP5-201ENST00000436276 388 ntBASIC2.85□□□□□ -1.95
TOP3BO95985 Z82188.1-201ENST00000436709 154 ntBASIC2.85□□□□□ -1.95
TOP3BO95985 TOMM22P6-201ENST00000465035 409 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms