Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 SNORA72.2-201ENST00000365028 127 ntBASIC-0.58□□□□□ -2.5
POLR1AO95602 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.58□□□□□ -2.5
POLR1AO95602 RNU6-756P-201ENST00000383997 107 ntBASIC-0.58□□□□□ -2.5
POLR1AO95602 MIR16-1-201ENST00000385271 89 ntBASIC-0.58□□□□□ -2.5
POLR1AO95602 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.58□□□□□ -2.5
POLR1AO95602 RNU4-27P-201ENST00000410889 139 ntBASIC-0.58□□□□□ -2.5
POLR1AO95602 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.58□□□□□ -2.5
POLR1AO95602 AC245047.8-201ENST00000456455 284 ntBASIC-0.58□□□□□ -2.5
POLR1AO95602 AC074133.1-201ENST00000515696 183 ntBASIC-0.58□□□□□ -2.5
POLR1AO95602 AF235103.2-201ENST00000525753 346 ntBASIC-0.58□□□□□ -2.5
POLR1AO95602 AC131055.1-201ENST00000584626 316 ntBASIC-0.58□□□□□ -2.5
POLR1AO95602 AC004223.2-201ENST00000590309 544 ntBASIC-0.58□□□□□ -2.5
POLR1AO95602 AL929325.1-201ENST00000603096 117 ntBASIC-0.58□□□□□ -2.5
POLR1AO95602 AL603865.2-201ENST00000401679 213 ntBASIC-0.59□□□□□ -2.5
POLR1AO95602 AC092170.1-201ENST00000440211 356 ntBASIC-0.59□□□□□ -2.5
POLR1AO95602 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.59□□□□□ -2.5
POLR1AO95602 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
POLR1AO95602 RNU6-138P-201ENST00000515952 107 ntBASIC-0.59□□□□□ -2.5
POLR1AO95602 BNIP3P9-201ENST00000603714 553 ntBASIC-0.59□□□□□ -2.5
POLR1AO95602 RNU6-534P-201ENST00000364877 106 ntBASIC-0.6□□□□□ -2.51
POLR1AO95602 AC010154.1-201ENST00000425857 269 ntBASIC-0.6□□□□□ -2.51
POLR1AO95602 AL356583.2-201ENST00000426536 280 ntBASIC-0.6□□□□□ -2.51
POLR1AO95602 RNU7-56P-201ENST00000458744 62 ntBASIC-0.6□□□□□ -2.51
POLR1AO95602 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.6□□□□□ -2.51
POLR1AO95602 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.6□□□□□ -2.51
POLR1AO95602 RNA5SP268-201ENST00000516828 124 ntBASIC-0.6□□□□□ -2.51
POLR1AO95602 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.6□□□□□ -2.51
POLR1AO95602 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.6□□□□□ -2.51
POLR1AO95602 AL157871.3-201ENST00000557231 293 ntBASIC-0.6□□□□□ -2.51
POLR1AO95602 AC092325.1-201ENST00000566449 554 ntBASIC-0.6□□□□□ -2.51
POLR1AO95602 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.6□□□□□ -2.51
POLR1AO95602 MIR4742-201ENST00000581069 85 ntBASIC-0.6□□□□□ -2.51
POLR1AO95602 AP000811.1-201ENST00000603803 651 ntBASIC-0.6□□□□□ -2.51
POLR1AO95602 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.6□□□□□ -2.51
POLR1AO95602 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.61□□□□□ -2.51
POLR1AO95602 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.61□□□□□ -2.51
POLR1AO95602 RNU2-59P-201ENST00000410482 191 ntBASIC-0.61□□□□□ -2.51
POLR1AO95602 RNU6-735P-201ENST00000410612 107 ntBASIC-0.61□□□□□ -2.51
POLR1AO95602 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.61□□□□□ -2.51
POLR1AO95602 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.61□□□□□ -2.51
POLR1AO95602 AL929288.2-201ENST00000446368 407 ntBASIC-0.61□□□□□ -2.51
POLR1AO95602 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.61□□□□□ -2.51
POLR1AO95602 RPS29P15-201ENST00000458329 171 ntBASIC-0.61□□□□□ -2.51
POLR1AO95602 AC114981.1-201ENST00000503897 678 ntBASIC-0.61□□□□□ -2.51
POLR1AO95602 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-0.61□□□□□ -2.51
POLR1AO95602 AL034555.1-201ENST00000604816 211 ntBASIC-0.61□□□□□ -2.51
POLR1AO95602 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.61□□□□□ -2.51
POLR1AO95602 TPMTP2-201ENST00000414372 726 ntBASIC-0.61□□□□□ -2.51
POLR1AO95602 MED13P1-201ENST00000428342 171 ntBASIC-0.61□□□□□ -2.51
POLR1AO95602 MTATP6P23-201ENST00000440153 476 ntBASIC-0.61□□□□□ -2.51
POLR1AO95602 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.61□□□□□ -2.51
POLR1AO95602 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.61□□□□□ -2.51
POLR1AO95602 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.61□□□□□ -2.51
POLR1AO95602 RBBP4P6-201ENST00000508098 202 ntBASIC-0.61□□□□□ -2.51
POLR1AO95602 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.61□□□□□ -2.51
POLR1AO95602 AC023827.1-201ENST00000569247 97 ntBASIC-0.61□□□□□ -2.51
POLR1AO95602 AF038458.1-201ENST00000588406 262 ntBASIC-0.61□□□□□ -2.51
POLR1AO95602 BNIP3P30-201ENST00000601184 574 ntBASIC-0.61□□□□□ -2.51
POLR1AO95602 AC011921.3-201ENST00000605540 361 ntBASIC-0.61□□□□□ -2.51
POLR1AO95602 AC015726.2-201ENST00000620112 122 ntBASIC-0.61□□□□□ -2.51
POLR1AO95602 AC092656.1-203ENST00000624134 423 ntBASIC-0.61□□□□□ -2.51
POLR1AO95602 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.62□□□□□ -2.51
POLR1AO95602 MTCO3P17-201ENST00000443775 513 ntBASIC-0.62□□□□□ -2.51
POLR1AO95602 ELOCP30-201ENST00000447108 299 ntBASIC-0.62□□□□□ -2.51
POLR1AO95602 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.62□□□□□ -2.51
POLR1AO95602 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.62□□□□□ -2.51
POLR1AO95602 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.62□□□□□ -2.51
POLR1AO95602 AC009902.1-201ENST00000519351 183 ntBASIC-0.62□□□□□ -2.51
POLR1AO95602 AC109446.1-201ENST00000566172 220 ntBASIC-0.62□□□□□ -2.51
POLR1AO95602 MIR3681-201ENST00000580089 72 ntBASIC-0.62□□□□□ -2.51
POLR1AO95602 AL591926.4-201ENST00000616895 298 ntBASIC-0.62□□□□□ -2.51
POLR1AO95602 AL391099.1-201ENST00000624635 187 ntBASIC-0.62□□□□□ -2.51
POLR1AO95602 MIR1-1-201ENST00000362147 71 ntBASIC-0.63□□□□□ -2.51
POLR1AO95602 RNU6-28P-201ENST00000362378 107 ntBASIC-0.63□□□□□ -2.51
POLR1AO95602 RNA5SP323-201ENST00000391094 133 ntBASIC-0.63□□□□□ -2.51
POLR1AO95602 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.63□□□□□ -2.51
POLR1AO95602 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.63□□□□□ -2.51
POLR1AO95602 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.63□□□□□ -2.51
POLR1AO95602 AC010376.1-201ENST00000522101 334 ntBASIC-0.63□□□□□ -2.51
POLR1AO95602 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.63□□□□□ -2.51
POLR1AO95602 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.63□□□□□ -2.51
POLR1AO95602 RNU6-212P-201ENST00000362642 104 ntBASIC-0.64□□□□□ -2.51
POLR1AO95602 RNU4-76P-201ENST00000364509 141 ntBASIC-0.64□□□□□ -2.51
POLR1AO95602 AL590632.1-201ENST00000424289 371 ntBASIC-0.64□□□□□ -2.51
POLR1AO95602 AC013262.1-201ENST00000426710 252 ntBASIC-0.64□□□□□ -2.51
POLR1AO95602 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.64□□□□□ -2.51
POLR1AO95602 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.64□□□□□ -2.51
POLR1AO95602 AL606517.1-201ENST00000446914 387 ntBASIC-0.64□□□□□ -2.51
POLR1AO95602 SNORD126-201ENST00000459475 77 ntBASIC-0.64□□□□□ -2.51
POLR1AO95602 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.64□□□□□ -2.51
POLR1AO95602 AC022868.1-201ENST00000517767 391 ntBASIC-0.64□□□□□ -2.51
POLR1AO95602 AC091163.3-201ENST00000518269 1144 ntBASIC-0.64□□□□□ -2.51
POLR1AO95602 SNRPGP1-201ENST00000553864 222 ntBASIC-0.64□□□□□ -2.51
POLR1AO95602 MIR6079-201ENST00000635807 62 ntBASIC-0.64□□□□□ -2.51
POLR1AO95602 RNU6-199P-201ENST00000362954 107 ntBASIC-0.64□□□□□ -2.51
POLR1AO95602 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.64□□□□□ -2.51
POLR1AO95602 SNORD113.3-201ENST00000364630 78 ntBASIC-0.64□□□□□ -2.51
POLR1AO95602 SNORD114-3-201ENST00000364969 75 ntBASIC-0.64□□□□□ -2.51
POLR1AO95602 RNU6-166P-201ENST00000384371 107 ntBASIC-0.64□□□□□ -2.51
POLR1AO95602 RNA5SP109-201ENST00000391010 116 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms