Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC004832.4-201ENST00000608952 331 ntBASIC-0.25□□□□□ -2.45
SIX6O95475 AL096861.1-201ENST00000610899 123 ntBASIC-0.25□□□□□ -2.45
SIX6O95475 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.25□□□□□ -2.45
SIX6O95475 AL078595.3-201ENST00000623815 1166 ntBASIC-0.25□□□□□ -2.45
SIX6O95475 AL390237.1-201ENST00000404226 1415 ntBASIC-0.25□□□□□ -2.45
SIX6O95475 SNORA2.2-201ENST00000365473 135 ntBASIC-0.26□□□□□ -2.45
SIX6O95475 RNU6-417P-201ENST00000384712 107 ntBASIC-0.26□□□□□ -2.45
SIX6O95475 RNU6-700P-201ENST00000391043 107 ntBASIC-0.26□□□□□ -2.45
SIX6O95475 TIMM9P2-201ENST00000419324 266 ntBASIC-0.26□□□□□ -2.45
SIX6O95475 MTND1P20-201ENST00000430341 950 ntBASIC-0.26□□□□□ -2.45
SIX6O95475 USP9YP28-201ENST00000435142 589 ntBASIC-0.26□□□□□ -2.45
SIX6O95475 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.26□□□□□ -2.45
SIX6O95475 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.26□□□□□ -2.45
SIX6O95475 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.26□□□□□ -2.45
SIX6O95475 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.26□□□□□ -2.45
SIX6O95475 RNU6-551P-201ENST00000516661 103 ntBASIC-0.26□□□□□ -2.45
SIX6O95475 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
SIX6O95475 MIR3923-201ENST00000579521 83 ntBASIC-0.26□□□□□ -2.45
SIX6O95475 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.26□□□□□ -2.45
SIX6O95475 AC010620.1-201ENST00000601088 1102 ntBASIC-0.26□□□□□ -2.45
SIX6O95475 AC022217.4-201ENST00000604389 163 ntBASIC-0.26□□□□□ -2.45
SIX6O95475 RPL17P51-201ENST00000605218 238 ntBASIC-0.26□□□□□ -2.45
SIX6O95475 RNU6-94P-201ENST00000607728 107 ntBASIC-0.26□□□□□ -2.45
SIX6O95475 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.26□□□□□ -2.45
SIX6O95475 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.26□□□□□ -2.45
SIX6O95475 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.26□□□□□ -2.45
SIX6O95475 AP000484.1-201ENST00000620067 1252 ntBASIC-0.26□□□□□ -2.45
SIX6O95475 AC103706.2-201ENST00000638080 240 ntBASIC-0.26□□□□□ -2.45
SIX6O95475 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.27□□□□□ -2.45
SIX6O95475 RNA5SP432-201ENST00000362480 116 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 RNU6-545P-201ENST00000362681 104 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 SNORD114-5-201ENST00000362928 70 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 RNU6-302P-201ENST00000365249 107 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 MIR518A1-201ENST00000385068 85 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 RNA5SP496-201ENST00000391240 109 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 RNA5SP467-201ENST00000391274 118 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 RNU6-994P-201ENST00000410507 111 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.27□□□□□ -2.45
SIX6O95475 AL953862.1-201ENST00000423016 168 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.27□□□□□ -2.45
SIX6O95475 RPL37P21-201ENST00000435890 276 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.27□□□□□ -2.45
SIX6O95475 MTCO3P10-201ENST00000455912 772 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 AC007547.1-201ENST00000462177 490 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 SNRPGP7-201ENST00000469016 106 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 RBBP4P6-201ENST00000508098 202 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 SNORA25.12-201ENST00000516202 82 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.27□□□□□ -2.45
SIX6O95475 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.27□□□□□ -2.45
SIX6O95475 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 AL512347.1-201ENST00000566420 503 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 TMF1P1-201ENST00000576058 373 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 MIR548AC-201ENST00000585049 88 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 AC008752.3-201ENST00000588113 712 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 AC104408.1-201ENST00000605241 170 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.27□□□□□ -2.45
SIX6O95475 AC023158.2-201ENST00000614876 543 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 SEPT14P17-201ENST00000617978 177 ntBASIC-0.27□□□□□ -2.45
SIX6O95475 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.28□□□□□ -2.45
SIX6O95475 MIR330-201ENST00000362196 94 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 RNY4P16-201ENST00000364768 94 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 RNU6-946P-201ENST00000383878 107 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 RNU6V-201ENST00000384105 107 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 MIR193B-201ENST00000384907 83 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 MIR518E-201ENST00000385252 88 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 RNU6-440P-201ENST00000390882 105 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
SIX6O95475 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 SNORD71-201ENST00000411292 86 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.28□□□□□ -2.45
SIX6O95475 AC007283.2-201ENST00000424739 197 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 AC244670.1-201ENST00000436879 112 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.28□□□□□ -2.45
SIX6O95475 SNORD111.1-201ENST00000516421 86 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.28□□□□□ -2.45
SIX6O95475 EIF4A1P12-201ENST00000551910 141 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.28□□□□□ -2.45
SIX6O95475 RN7SL793P-201ENST00000583259 296 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 AC007014.2-201ENST00000615581 479 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 AC091925.1-201ENST00000623204 462 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 FRG1KP-201ENST00000623592 341 ntBASIC-0.28□□□□□ -2.45
SIX6O95475 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.29□□□□□ -2.46
SIX6O95475 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.29□□□□□ -2.46
SIX6O95475 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.29□□□□□ -2.46
SIX6O95475 AC245047.3-201ENST00000429428 127 ntBASIC-0.29□□□□□ -2.46
SIX6O95475 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.29□□□□□ -2.46
SIX6O95475 STAG3L5P-204ENST00000443759 179 ntBASIC-0.29□□□□□ -2.46
SIX6O95475 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.29□□□□□ -2.46
SIX6O95475 MTCO2P7-201ENST00000446518 666 ntBASIC-0.29□□□□□ -2.46
SIX6O95475 MTCO2P18-201ENST00000457151 658 ntBASIC-0.29□□□□□ -2.46
SIX6O95475 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.29□□□□□ -2.46
SIX6O95475 TPT1P7-201ENST00000458300 517 ntBASIC-0.29□□□□□ -2.46
SIX6O95475 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.29□□□□□ -2.46
SIX6O95475 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC-0.29□□□□□ -2.46
SIX6O95475 AC141557.1-201ENST00000540982 400 ntBASIC-0.29□□□□□ -2.46
SIX6O95475 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms