Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AP003733.2-201ENST00000529409 171 ntBASIC2.5□□□□□ -2.01
LDB3O75112 AC136932.1-201ENST00000574771 208 ntBASIC2.5□□□□□ -2.01
LDB3O75112 MIR4319-201ENST00000577285 85 ntBASIC2.5□□□□□ -2.01
LDB3O75112 AC103810.1-201ENST00000579873 453 ntBASIC2.5□□□□□ -2.01
LDB3O75112 AC010900.2-201ENST00000604508 210 ntBASIC2.5□□□□□ -2.01
LDB3O75112 AL356157.2-201ENST00000605122 111 ntBASIC2.5□□□□□ -2.01
LDB3O75112 AC096772.1-201ENST00000609146 564 ntBASIC2.5□□□□□ -2.01
LDB3O75112 AL138825.1-201ENST00000618587 192 ntBASIC2.5□□□□□ -2.01
LDB3O75112 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.5□□□□□ -2.01
LDB3O75112 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
LDB3O75112 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LDB3O75112 Y_RNA.14-201ENST00000362415 103 ntBASIC2.49□□□□□ -2.01
LDB3O75112 Y_RNA.257-201ENST00000364596 102 ntBASIC2.49□□□□□ -2.01
LDB3O75112 Y_RNA.288-201ENST00000364854 92 ntBASIC2.49□□□□□ -2.01
LDB3O75112 RNU6-1180P-201ENST00000364935 107 ntBASIC2.49□□□□□ -2.01
LDB3O75112 RNU6-1083P-201ENST00000384022 107 ntBASIC2.49□□□□□ -2.01
LDB3O75112 RNU6-622P-201ENST00000384272 103 ntBASIC2.49□□□□□ -2.01
LDB3O75112 BTF3L4P2-201ENST00000392798 346 ntBASIC2.49□□□□□ -2.01
LDB3O75112 RPL21P75-201ENST00000396599 483 ntBASIC2.49□□□□□ -2.01
LDB3O75112 RPL21P28-201ENST00000401418 483 ntBASIC2.49□□□□□ -2.01
LDB3O75112 FO393413.1-201ENST00000402892 195 ntBASIC2.49□□□□□ -2.01
LDB3O75112 AL031121.1-201ENST00000406553 254 ntBASIC2.49□□□□□ -2.01
LDB3O75112 MIR1302-6-201ENST00000408466 90 ntBASIC2.49□□□□□ -2.01
LDB3O75112 RNU2-20P-201ENST00000410425 191 ntBASIC2.49□□□□□ -2.01
LDB3O75112 AL358453.1-201ENST00000422522 250 ntBASIC2.49□□□□□ -2.01
LDB3O75112 AL590556.1-201ENST00000423231 483 ntBASIC2.49□□□□□ -2.01
LDB3O75112 AC004383.1-201ENST00000438135 289 ntBASIC2.49□□□□□ -2.01
LDB3O75112 Z98949.2-201ENST00000440996 144 ntBASIC2.49□□□□□ -2.01
LDB3O75112 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.49□□□□□ -2.01
LDB3O75112 RNU7-87P-201ENST00000459343 62 ntBASIC2.49□□□□□ -2.01
LDB3O75112 RPL21P39-201ENST00000463605 483 ntBASIC2.49□□□□□ -2.01
LDB3O75112 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.49□□□□□ -2.01
LDB3O75112 RPL23AP70-201ENST00000483361 460 ntBASIC2.49□□□□□ -2.01
LDB3O75112 AC087190.1-201ENST00000484462 480 ntBASIC2.49□□□□□ -2.01
LDB3O75112 AC107032.1-201ENST00000485945 480 ntBASIC2.49□□□□□ -2.01
LDB3O75112 AC132942.1-201ENST00000486753 483 ntBASIC2.49□□□□□ -2.01
LDB3O75112 AC093591.1-201ENST00000491435 481 ntBASIC2.49□□□□□ -2.01
LDB3O75112 RPL21P16-201ENST00000495531 483 ntBASIC2.49□□□□□ -2.01
LDB3O75112 Y_RNA.673-201ENST00000516306 88 ntBASIC2.49□□□□□ -2.01
LDB3O75112 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.49□□□□□ -2.01
LDB3O75112 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.49□□□□□ -2.01
LDB3O75112 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.49□□□□□ -2.01
LDB3O75112 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.49□□□□□ -2.01
LDB3O75112 AC012433.1-201ENST00000588916 398 ntBASIC2.49□□□□□ -2.01
LDB3O75112 AL109918.3-201ENST00000603072 338 ntBASIC2.49□□□□□ -2.01
LDB3O75112 AL390123.1-201ENST00000603216 237 ntBASIC2.49□□□□□ -2.01
LDB3O75112 uc_338.14-201ENST00000613162 166 ntBASIC2.49□□□□□ -2.01
LDB3O75112 AC130454.1-201ENST00000622948 401 ntBASIC2.49□□□□□ -2.01
LDB3O75112 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.49□□□□□ -2.01
LDB3O75112 U6.92-201ENST00000636464 89 ntBASIC2.49□□□□□ -2.01
LDB3O75112 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LDB3O75112 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.49□□□□□ -2.01
LDB3O75112 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.49□□□□□ -2.01
LDB3O75112 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.49□□□□□ -2.01
LDB3O75112 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
LDB3O75112 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.49□□□□□ -2.01
LDB3O75112 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LDB3O75112 AC010329.5-201ENST00000623497 2174 ntBASIC2.49□□□□□ -2.01
LDB3O75112 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
LDB3O75112 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.48□□□□□ -2.01
LDB3O75112 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.48□□□□□ -2.01
LDB3O75112 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.48□□□□□ -2.01
LDB3O75112 RNU6-859P-201ENST00000362728 107 ntBASIC2.48□□□□□ -2.01
LDB3O75112 snoU2_19.2-201ENST00000363024 80 ntBASIC2.48□□□□□ -2.01
LDB3O75112 RNU6-461P-201ENST00000364195 107 ntBASIC2.48□□□□□ -2.01
LDB3O75112 RNU4-50P-201ENST00000364361 141 ntBASIC2.48□□□□□ -2.01
LDB3O75112 MIR544A-201ENST00000384855 91 ntBASIC2.48□□□□□ -2.01
LDB3O75112 MIR628-201ENST00000385229 95 ntBASIC2.48□□□□□ -2.01
LDB3O75112 MIR887-201ENST00000401258 79 ntBASIC2.48□□□□□ -2.01
LDB3O75112 AL139281.1-201ENST00000422120 335 ntBASIC2.48□□□□□ -2.01
LDB3O75112 AC108938.1-201ENST00000451204 136 ntBASIC2.48□□□□□ -2.01
LDB3O75112 AF186996.7-201ENST00000492781 209 ntBASIC2.48□□□□□ -2.01
LDB3O75112 AC025465.3-201ENST00000510570 311 ntBASIC2.48□□□□□ -2.01
LDB3O75112 RNU6-911P-201ENST00000516523 104 ntBASIC2.48□□□□□ -2.01
LDB3O75112 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.48□□□□□ -2.01
LDB3O75112 AC007375.1-201ENST00000554513 578 ntBASIC2.48□□□□□ -2.01
LDB3O75112 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.48□□□□□ -2.01
LDB3O75112 AC090897.2-201ENST00000581715 130 ntBASIC2.48□□□□□ -2.01
LDB3O75112 AC023043.3-201ENST00000593113 385 ntBASIC2.48□□□□□ -2.01
LDB3O75112 AC011476.5-201ENST00000615594 130 ntBASIC2.48□□□□□ -2.01
LDB3O75112 AP001282.2-201ENST00000616149 309 ntBASIC2.48□□□□□ -2.01
LDB3O75112 SNORA43.4-201ENST00000629559 138 ntBASIC2.48□□□□□ -2.01
LDB3O75112 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.48□□□□□ -2.01
LDB3O75112 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.48□□□□□ -2.01
LDB3O75112 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
LDB3O75112 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.47□□□□□ -2.01
LDB3O75112 Z75746.1-201ENST00000440243 2080 ntBASIC2.47□□□□□ -2.01
LDB3O75112 AC062016.1-201ENST00000355719 319 ntBASIC2.47□□□□□ -2.01
LDB3O75112 SNORD56.5-201ENST00000364281 72 ntBASIC2.47□□□□□ -2.01
LDB3O75112 Y_RNA.350-201ENST00000365409 98 ntBASIC2.47□□□□□ -2.01
LDB3O75112 RNU6-611P-201ENST00000384276 104 ntBASIC2.47□□□□□ -2.01
LDB3O75112 Y_RNA.562-201ENST00000384695 113 ntBASIC2.47□□□□□ -2.01
LDB3O75112 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.47□□□□□ -2.01
LDB3O75112 MTND4LP30-201ENST00000454092 297 ntBASIC2.47□□□□□ -2.01
LDB3O75112 RPL23AP75-201ENST00000491601 451 ntBASIC2.47□□□□□ -2.01
LDB3O75112 HMGB3P17-201ENST00000504195 649 ntBASIC2.47□□□□□ -2.01
LDB3O75112 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.47□□□□□ -2.01
LDB3O75112 AC067942.3-201ENST00000512025 362 ntBASIC2.47□□□□□ -2.01
LDB3O75112 SNORA31.6-201ENST00000516241 130 ntBASIC2.47□□□□□ -2.01
LDB3O75112 SNORA40.15-201ENST00000516884 107 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms