Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 HMGN2P26-201ENST00000463169 339 ntBASIC-0.34□□□□□ -2.46
SSSCA1O60232 RPS3AP17-201ENST00000472594 777 ntBASIC-0.34□□□□□ -2.46
SSSCA1O60232 TRBVB-201ENST00000477100 408 ntBASIC-0.34□□□□□ -2.46
SSSCA1O60232 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.34□□□□□ -2.46
SSSCA1O60232 MTCO3P9-201ENST00000506989 781 ntBASIC-0.34□□□□□ -2.46
SSSCA1O60232 AC104136.1-201ENST00000512969 394 ntBASIC-0.34□□□□□ -2.46
SSSCA1O60232 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.34□□□□□ -2.46
SSSCA1O60232 RNU6-677P-201ENST00000516914 101 ntBASIC-0.34□□□□□ -2.46
SSSCA1O60232 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.34□□□□□ -2.46
SSSCA1O60232 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.34□□□□□ -2.46
SSSCA1O60232 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
SSSCA1O60232 AC004223.2-201ENST00000590309 544 ntBASIC-0.34□□□□□ -2.46
SSSCA1O60232 SNORA25.18-201ENST00000607153 114 ntBASIC-0.34□□□□□ -2.46
SSSCA1O60232 AP000943.4-201ENST00000622912 357 ntBASIC-0.34□□□□□ -2.46
SSSCA1O60232 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
SSSCA1O60232 MIR18A-201ENST00000362310 71 ntBASIC-0.35□□□□□ -2.47
SSSCA1O60232 RNY1-201ENST00000364228 113 ntBASIC-0.35□□□□□ -2.47
SSSCA1O60232 RNU6-923P-201ENST00000364753 107 ntBASIC-0.35□□□□□ -2.47
SSSCA1O60232 RNU6-929P-201ENST00000384429 107 ntBASIC-0.35□□□□□ -2.47
SSSCA1O60232 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
SSSCA1O60232 RPS20P2-201ENST00000402520 389 ntBASIC-0.35□□□□□ -2.47
SSSCA1O60232 SNORD71-201ENST00000411292 86 ntBASIC-0.35□□□□□ -2.47
SSSCA1O60232 VPS26BP1-201ENST00000417155 755 ntBASIC-0.35□□□□□ -2.47
SSSCA1O60232 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC-0.35□□□□□ -2.47
SSSCA1O60232 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.35□□□□□ -2.47
SSSCA1O60232 AL358176.2-201ENST00000425769 204 ntBASIC-0.35□□□□□ -2.47
SSSCA1O60232 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.35□□□□□ -2.47
SSSCA1O60232 MTND4LP7-201ENST00000431728 294 ntBASIC-0.35□□□□□ -2.47
SSSCA1O60232 AL606489.2-201ENST00000433886 234 ntBASIC-0.35□□□□□ -2.47
SSSCA1O60232 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.35□□□□□ -2.47
SSSCA1O60232 AC119751.4-201ENST00000507498 357 ntBASIC-0.35□□□□□ -2.47
SSSCA1O60232 AC113347.3-201ENST00000509113 148 ntBASIC-0.35□□□□□ -2.47
SSSCA1O60232 AC025465.4-201ENST00000513422 638 ntBASIC-0.35□□□□□ -2.47
SSSCA1O60232 AC022868.1-201ENST00000517767 391 ntBASIC-0.35□□□□□ -2.47
SSSCA1O60232 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.35□□□□□ -2.47
SSSCA1O60232 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.35□□□□□ -2.47
SSSCA1O60232 MIR8054-201ENST00000620877 86 ntBASIC-0.35□□□□□ -2.47
SSSCA1O60232 AC131159.1-201ENST00000621854 213 ntBASIC-0.35□□□□□ -2.47
SSSCA1O60232 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.35□□□□□ -2.47
SSSCA1O60232 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 SNORD114-31-201ENST00000363219 75 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
SSSCA1O60232 MIR1287-201ENST00000408492 90 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 MIR1197-201ENST00000408818 88 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 RNU6-994P-201ENST00000410507 111 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 AC096531.1-201ENST00000419107 107 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.36□□□□□ -2.47
SSSCA1O60232 AL121578.1-201ENST00000428051 892 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 MTCO1P3-201ENST00000429327 192 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.36□□□□□ -2.47
SSSCA1O60232 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.36□□□□□ -2.47
SSSCA1O60232 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.36□□□□□ -2.47
SSSCA1O60232 AC109445.1-201ENST00000512356 383 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 AC116347.2-201ENST00000514912 523 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 Y_RNA.676-201ENST00000516393 96 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.36□□□□□ -2.47
SSSCA1O60232 AC024995.1-201ENST00000523014 93 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 AC021451.1-201ENST00000523498 1129 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 DEFB108A-201ENST00000530110 222 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.36□□□□□ -2.47
SSSCA1O60232 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC-0.36□□□□□ -2.47
SSSCA1O60232 AL022154.1-201ENST00000604698 785 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 AC004832.4-201ENST00000608952 331 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 MIR8064-201ENST00000612863 90 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 AL357075.2-201ENST00000614906 189 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 SEPT14P17-201ENST00000617978 177 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 AP000484.1-201ENST00000620067 1252 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 AC099654.8-201ENST00000637757 681 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 MTND5P33-201ENST00000571250 1450 ntBASIC-0.36□□□□□ -2.47
SSSCA1O60232 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.37□□□□□ -2.47
SSSCA1O60232 SNORD114-26-201ENST00000363543 72 ntBASIC-0.37□□□□□ -2.47
SSSCA1O60232 RNA5SP275-201ENST00000363936 118 ntBASIC-0.37□□□□□ -2.47
SSSCA1O60232 SMIM11P1-201ENST00000369586 178 ntBASIC-0.37□□□□□ -2.47
SSSCA1O60232 MIR145-201ENST00000384967 88 ntBASIC-0.37□□□□□ -2.47
SSSCA1O60232 MIR613-201ENST00000385248 95 ntBASIC-0.37□□□□□ -2.47
SSSCA1O60232 RNU6-278P-201ENST00000390945 109 ntBASIC-0.37□□□□□ -2.47
SSSCA1O60232 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.37□□□□□ -2.47
SSSCA1O60232 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.37□□□□□ -2.47
SSSCA1O60232 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.37□□□□□ -2.47
SSSCA1O60232 AL356583.2-201ENST00000426536 280 ntBASIC-0.37□□□□□ -2.47
SSSCA1O60232 SEPT14P24-201ENST00000447236 180 ntBASIC-0.37□□□□□ -2.47
SSSCA1O60232 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.37□□□□□ -2.47
SSSCA1O60232 AC079776.3-201ENST00000450665 370 ntBASIC-0.37□□□□□ -2.47
SSSCA1O60232 LINC01399-202ENST00000458450 244 ntBASIC-0.37□□□□□ -2.47
SSSCA1O60232 RBBP4P6-201ENST00000508098 202 ntBASIC-0.37□□□□□ -2.47
SSSCA1O60232 IGLVI-20-201ENST00000519296 130 ntBASIC-0.37□□□□□ -2.47
SSSCA1O60232 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.37□□□□□ -2.47
SSSCA1O60232 AC112693.2-201ENST00000556538 232 ntBASIC-0.37□□□□□ -2.47
SSSCA1O60232 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.37□□□□□ -2.47
SSSCA1O60232 AC022217.4-201ENST00000604389 163 ntBASIC-0.37□□□□□ -2.47
SSSCA1O60232 AC064807.4-201ENST00000607201 407 ntBASIC-0.37□□□□□ -2.47
SSSCA1O60232 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.37□□□□□ -2.47
SSSCA1O60232 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.37□□□□□ -2.47
SSSCA1O60232 MIR1295B-201ENST00000636144 60 ntBASIC-0.37□□□□□ -2.47
SSSCA1O60232 RNU5B-1-201ENST00000363286 116 ntBASIC-0.38□□□□□ -2.47
SSSCA1O60232 RNY4P16-201ENST00000364768 94 ntBASIC-0.38□□□□□ -2.47
SSSCA1O60232 SNORA2.2-201ENST00000365473 135 ntBASIC-0.38□□□□□ -2.47
SSSCA1O60232 RNU6-417P-201ENST00000384712 107 ntBASIC-0.38□□□□□ -2.47
SSSCA1O60232 MIR593-201ENST00000384856 100 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms