Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SNORA67.6-201ENST00000391093 99 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 MIR1287-201ENST00000408492 90 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNA5SP118-201ENST00000410385 109 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC138623.1-201ENST00000418060 216 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 ZNF885P-201ENST00000420174 1098 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 AL590632.1-201ENST00000424289 371 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 RBMX2P4-201ENST00000441256 376 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC027575.1-201ENST00000481064 460 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC005840.1-201ENST00000498412 377 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 AK3P2-201ENST00000507976 429 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-358P-201ENST00000516564 75 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-1332P-201ENST00000516666 104 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 SNORA31.16-201ENST00000516773 139 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-1088P-201ENST00000516850 104 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC118273.2-201ENST00000532092 465 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 CBX3P4-201ENST00000538909 354 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC233702.2-202ENST00000562547 291 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC104581.2-201ENST00000572227 430 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 MIR4303-201ENST00000581299 66 ntBASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
TMX2-CTNND1H3BSU7 Y_RNA.212-201ENST00000364177 102 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-1141P-201ENST00000364520 107 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-1283P-201ENST00000365314 105 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 Y_RNA.414-201ENST00000384011 101 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-95P-201ENST00000384697 107 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 Y_RNA.573-201ENST00000384763 105 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 RN7SKP61-201ENST00000410642 295 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-373P-201ENST00000411247 98 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 AL161788.1-201ENST00000441805 169 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU7-187P-201ENST00000458985 68 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU7-95P-201ENST00000459222 64 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-1037P-201ENST00000459571 107 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC007547.1-201ENST00000462177 490 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC008628.2-201ENST00000502605 298 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 HMGB1P35-201ENST00000503360 598 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 MTCO2P30-201ENST00000503662 364 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC005741.1-201ENST00000511094 432 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 PTP4A1P4-201ENST00000512479 322 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-864P-201ENST00000516256 108 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-256P-201ENST00000516747 97 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 SNORA48.11-201ENST00000517015 89 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC107953.1-201ENST00000522216 297 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 AF235103.2-201ENST00000525753 346 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 SNORA59B-202ENST00000578183 701 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC018638.8-201ENST00000588755 281 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC018889.1-201ENST00000605372 397 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC007792.1-201ENST00000623023 402 ntBASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
TMX2-CTNND1H3BSU7 Y_RNA.100-201ENST00000363141 102 ntBASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 Y_RNA.157-201ENST00000363638 102 ntBASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-1317P-201ENST00000364582 104 ntBASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-325P-201ENST00000411132 105 ntBASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 UBE2V1P4-201ENST00000425374 344 ntBASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC078809.1-201ENST00000427601 140 ntBASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC025465.4-201ENST00000513422 638 ntBASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-612P-201ENST00000516909 102 ntBASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 AL132822.1-201ENST00000617063 513 ntBASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 MIR5739-201ENST00000619803 80 ntBASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 AL133216.2-202ENST00000634512 349 ntBASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC100810.6-201ENST00000638068 285 ntBASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TMX2-CTNND1H3BSU7 snoU2_19.1-201ENST00000362361 80 ntBASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-212P-201ENST00000362642 104 ntBASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-60P-201ENST00000364792 103 ntBASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 SNORD116-11-201ENST00000383882 92 ntBASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 SNORA36A-201ENST00000384221 132 ntBASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 MIR499A-201ENST00000384903 122 ntBASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNA5SP201-201ENST00000410316 124 ntBASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 RPS15AP10-201ENST00000432472 382 ntBASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 RPL23AP3-201ENST00000453844 468 ntBASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 RPL9P9-202ENST00000466501 579 ntBASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC018630.3-201ENST00000542637 96 ntBASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC060780.3-201ENST00000589464 80 ntBASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC078795.3-201ENST00000602913 472 ntBASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 AL356157.2-201ENST00000605122 111 ntBASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 AL133215.3-201ENST00000609801 448 ntBASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC022202.1-201ENST00000613515 211 ntBASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 U4atac.1-201ENST00000618345 95 ntBASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 AP000560.1-201ENST00000624150 1937 ntBASIC1.54□□□□□ -2.16
TMX2-CTNND1H3BSU7 AL391987.6-201ENST00000305671 199 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms