Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 AC026241.1-201ENST00000517873 2142 ntBASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 AC092628.2-201ENST00000622492 339 ntBASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.63□□□□□ -1.83
UPK3BL1B0FP48 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 AL356274.2-201ENST00000624379 3752 ntBASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 RNU6-727P-201ENST00000363592 107 ntBASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 RNA5SP322-201ENST00000363617 119 ntBASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 RNU6-211P-201ENST00000384047 107 ntBASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 AC024067.1-201ENST00000426199 223 ntBASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 AC009237.7-201ENST00000447357 229 ntBASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 AC008155.2-201ENST00000464337 397 ntBASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 RPL23AP70-201ENST00000483361 460 ntBASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 RNU2-12P-201ENST00000517216 168 ntBASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 AP002001.1-203ENST00000534002 267 ntBASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 TGIF1P1-201ENST00000558095 802 ntBASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 AC025946.2-201ENST00000603398 234 ntBASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 AC005562.2-201ENST00000618264 111 ntBASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 AL365265.1-201ENST00000621045 234 ntBASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 AC018692.3-201ENST00000623929 123 ntBASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UPK3BL1B0FP48 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 AL359854.1-201ENST00000614203 1594 ntBASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 Y_RNA.170-201ENST00000363746 110 ntBASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 RNU6-923P-201ENST00000364753 107 ntBASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 Y_RNA.308-201ENST00000365043 101 ntBASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 RNU6-1083P-201ENST00000384022 107 ntBASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 MIR128-1-201ENST00000384921 82 ntBASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 MIR186-201ENST00000384988 86 ntBASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 RNU6-394P-201ENST00000410735 107 ntBASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 RN7SKP51-201ENST00000410781 304 ntBASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 AP001486.1-201ENST00000463339 476 ntBASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 RNY3P16-201ENST00000516338 101 ntBASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 AC079598.5-201ENST00000547460 117 ntBASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 MIR4308-201ENST00000580634 81 ntBASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 AC020914.4-201ENST00000597690 277 ntBASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 SNORD11B-201ENST00000607707 90 ntBASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 AC021753.1-201ENST00000635724 168 ntBASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 FAM35DP-201ENST00000323387 2712 ntBASIC3.61□□□□□ -1.83
UPK3BL1B0FP48 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 RNU6-653P-201ENST00000363074 106 ntBASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 U3.44-201ENST00000458938 192 ntBASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 RN7SL93P-201ENST00000463035 293 ntBASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 AC112771.1-201ENST00000463581 102 ntBASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 AC091021.1-201ENST00000468051 388 ntBASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 RPS27P26-201ENST00000494583 239 ntBASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 AC093663.1-201ENST00000497190 394 ntBASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 RNU2-27P-201ENST00000516185 142 ntBASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 RN7SKP83-201ENST00000516512 178 ntBASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 SNORA70.18-201ENST00000516696 98 ntBASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 AL670379.2-201ENST00000604983 252 ntBASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 AL137843.1-201ENST00000605078 385 ntBASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 RPL17P51-201ENST00000605218 238 ntBASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 AC108706.1-201ENST00000611053 297 ntBASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 AC068205.3-201ENST00000636385 468 ntBASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 AC132825.6-201ENST00000638861 357 ntBASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 AC091152.2-201ENST00000591628 2569 ntBASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
UPK3BL1B0FP48 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 RNU6-1272P-201ENST00000362776 107 ntBASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 RNU1-18P-201ENST00000363062 164 ntBASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 SNORD50.2-201ENST00000365465 70 ntBASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 Y_RNA.415-201ENST00000384012 112 ntBASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 Y_RNA.441-201ENST00000384123 112 ntBASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 AC004386.2-201ENST00000441858 148 ntBASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 RPL21P10-201ENST00000463521 490 ntBASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 AC140059.1-201ENST00000489238 361 ntBASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 RNU6-436P-201ENST00000516171 114 ntBASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 RNU6-579P-201ENST00000516879 102 ntBASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.59□□□□□ -1.83
UPK3BL1B0FP48 MIR3145-201ENST00000580727 82 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms