Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 U3.13-201ENST00000364804 214 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 RNU6-1032P-201ENST00000384100 107 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 RNU6-622P-201ENST00000384272 103 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 MIR487A-201ENST00000385009 80 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 MIR764-201ENST00000390811 85 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 AL591034.2-201ENST00000402839 359 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 AL356379.1-201ENST00000414105 126 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 AC074117.2-201ENST00000417130 397 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 HMGN2P38-201ENST00000423806 265 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 AC008267.5-201ENST00000424928 265 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 AC096745.1-201ENST00000509945 370 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 RNU6-377P-201ENST00000515965 102 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 RNU6-237P-201ENST00000515985 71 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 RNA5SP384-201ENST00000516615 116 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 MIR514B-201ENST00000516774 80 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 IMMP1LP2-201ENST00000552954 492 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 FRG2DP-202ENST00000566967 323 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 SNRPGP17-201ENST00000603780 214 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 AL162373.1-201ENST00000620433 407 ntBASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.04□□□□□ -2.08
TRIM49BA6NDI0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 AC006026.1-201ENST00000444025 1803 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 SNORA16.1-201ENST00000364597 132 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 RNU6-214P-201ENST00000384130 107 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 RNU6-331P-201ENST00000384724 107 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 AL512604.1-201ENST00000404812 257 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 RAP1BP3-201ENST00000407180 549 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 RNU2-41P-201ENST00000410991 178 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 HMGN2P19-201ENST00000425149 265 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 AC093019.1-201ENST00000443135 252 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 MTCO3P10-201ENST00000455912 772 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 Y_RNA.632-201ENST00000459189 102 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 MTND3P22-201ENST00000510932 243 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 AC026782.1-201ENST00000512952 449 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 MRPS36P4-201ENST00000534436 298 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 NDUFA5P6-201ENST00000542110 379 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 AC093249.1-201ENST00000567049 203 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 FGF7P1-201ENST00000582820 288 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 MIR4769-201ENST00000584126 77 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 AL133255.1-201ENST00000606374 441 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 AL359314.1-201ENST00000616913 261 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 AC090517.3-201ENST00000625170 141 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 SNORA43.4-201ENST00000629559 138 ntBASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRIM49BA6NDI0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
TRIM49BA6NDI0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 RNU1-23P-201ENST00000363361 144 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 Y_RNA.132-201ENST00000363421 102 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 RNU6-601P-201ENST00000384540 107 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 MIR544A-201ENST00000384855 91 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 MIR521-1-201ENST00000384902 87 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 SNORA46.1-201ENST00000391069 153 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 RPS29P13-201ENST00000402041 169 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 Y_RNA.594-201ENST00000410373 140 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 MTND3P23-201ENST00000431980 347 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 AL133396.1-201ENST00000432048 687 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 AL591806.2-201ENST00000433122 173 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 AL137159.1-201ENST00000452808 512 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 snoU13.23-201ENST00000458863 104 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 RPL9P9-202ENST00000466501 579 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 HMGB1P35-201ENST00000503360 598 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 RNU6-559P-201ENST00000516151 98 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 Y_RNA.675-201ENST00000516389 149 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 RNU6-1153P-201ENST00000516760 105 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 RNU6-612P-201ENST00000516909 102 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 AC100830.2-201ENST00000581636 240 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 AC009229.3-201ENST00000608056 282 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 AL133215.3-201ENST00000609801 448 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 AC022202.1-201ENST00000613515 211 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 uc_338.20-201ENST00000621563 178 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 AL008636.1-201ENST00000625038 1018 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 KPNA2P1-201ENST00000458289 1591 ntBASIC2.02□□□□□ -2.09
TRIM49BA6NDI0 MTND4P29-201ENST00000503122 1372 ntBASIC2.01□□□□□ -2.09
TRIM49BA6NDI0 RNU4-79P-201ENST00000362764 141 ntBASIC2.01□□□□□ -2.09
TRIM49BA6NDI0 RNU6-655P-201ENST00000362858 107 ntBASIC2.01□□□□□ -2.09
TRIM49BA6NDI0 SNORD32A-201ENST00000364805 84 ntBASIC2.01□□□□□ -2.09
TRIM49BA6NDI0 RNU6-128P-201ENST00000383976 107 ntBASIC2.01□□□□□ -2.09
TRIM49BA6NDI0 MIR9-3-201ENST00000385084 90 ntBASIC2.01□□□□□ -2.09
TRIM49BA6NDI0 MIR549A-201ENST00000385268 96 ntBASIC2.01□□□□□ -2.09
TRIM49BA6NDI0 RNA5SP390-201ENST00000410191 113 ntBASIC2.01□□□□□ -2.09
TRIM49BA6NDI0 Y_RNA.646-201ENST00000410980 101 ntBASIC2.01□□□□□ -2.09
TRIM49BA6NDI0 RPL37P10-201ENST00000412884 288 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms