Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 AP000560.1-201ENST00000624150 1937 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 RNY3P11-201ENST00000364153 102 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 Y_RNA.428-201ENST00000384078 102 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 MRPL42P3-201ENST00000401492 326 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 AC113618.1-201ENST00000416747 285 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 EIF1AXP1-201ENST00000419267 435 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 CR769767.1-201ENST00000436337 346 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 AC124916.1-201ENST00000444020 547 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 AC104564.1-201ENST00000493028 407 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 GZMAP1-201ENST00000503054 631 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 RNU5F-2P-201ENST00000516066 82 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 RNU6-264P-201ENST00000517134 104 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 AC109329.1-201ENST00000518744 317 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 RNU6-988P-201ENST00000519081 107 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 AL590705.4-201ENST00000532209 134 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 HSPE1P4-201ENST00000550617 308 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 AC004584.2-201ENST00000570407 410 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 PART1_1.1-201ENST00000611761 217 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 MIR1244-1-201ENST00000612829 85 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 AC083806.3-201ENST00000614016 455 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 AL449363.1-201ENST00000617815 186 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 MIR1244-3-201ENST00000635744 85 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 MIR1244-2-201ENST00000636449 85 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 MIR1244-4-202ENST00000636813 85 ntBASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
MRPS28Q9Y2Q9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 AC010329.5-201ENST00000623497 2174 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 RNU1-72P-201ENST00000362976 153 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 Y_RNA.158-201ENST00000363651 101 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 SNORA5B-201ENST00000363786 132 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 SNORA38-201ENST00000363946 132 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 SNORD115-32-201ENST00000364079 82 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 Y_RNA.405-201ENST00000383979 100 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 RNU6-968P-201ENST00000384076 107 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 RNU1-52P-201ENST00000384190 164 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 Y_RNA.451-201ENST00000384200 100 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 RNU6-17P-201ENST00000384245 107 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 RNU6-18P-201ENST00000384527 107 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 Y_RNA.524-201ENST00000384564 100 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 Y_RNA.561-201ENST00000384694 100 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 MIR487A-201ENST00000385009 80 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 RNU6-1245P-201ENST00000411130 106 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 MTCYBP10-201ENST00000424905 650 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 RPL23AP50-201ENST00000434149 455 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 AC244670.1-201ENST00000436879 112 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 AC025750.2-201ENST00000442609 450 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 AL353752.1-201ENST00000454946 260 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 RN7SKP210-201ENST00000459176 261 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 AC096725.1-201ENST00000514266 313 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 SNORA25.10-201ENST00000515926 124 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 RNU6-475P-201ENST00000516073 104 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 AL606534.2-204ENST00000635008 178 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 AC233981.2-201ENST00000611524 1614 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 AC002543.1-201ENST00000299783 1954 ntBASIC2.16□□□□□ -2.06
MRPS28Q9Y2Q9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
MRPS28Q9Y2Q9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.15□□□□□ -2.06
MRPS28Q9Y2Q9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.15□□□□□ -2.06
MRPS28Q9Y2Q9 AC091812.1-201ENST00000432235 1948 ntBASIC2.15□□□□□ -2.06
MRPS28Q9Y2Q9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.15□□□□□ -2.07
MRPS28Q9Y2Q9 Y_RNA.364-201ENST00000365532 101 ntBASIC2.15□□□□□ -2.07
MRPS28Q9Y2Q9 Y_RNA.422-201ENST00000384054 114 ntBASIC2.15□□□□□ -2.07
MRPS28Q9Y2Q9 Y_RNA.504-201ENST00000384481 104 ntBASIC2.15□□□□□ -2.07
MRPS28Q9Y2Q9 MIR144-201ENST00000384886 86 ntBASIC2.15□□□□□ -2.07
MRPS28Q9Y2Q9 MIR190B-201ENST00000401119 79 ntBASIC2.15□□□□□ -2.07
MRPS28Q9Y2Q9 MTCYBP2-201ENST00000407745 171 ntBASIC2.15□□□□□ -2.07
MRPS28Q9Y2Q9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.15□□□□□ -2.07
MRPS28Q9Y2Q9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.15□□□□□ -2.07
MRPS28Q9Y2Q9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.15□□□□□ -2.07
MRPS28Q9Y2Q9 snoU13.30-201ENST00000458951 104 ntBASIC2.15□□□□□ -2.07
MRPS28Q9Y2Q9 U8.22-201ENST00000459141 133 ntBASIC2.15□□□□□ -2.07
MRPS28Q9Y2Q9 AC016632.1-201ENST00000503994 196 ntBASIC2.15□□□□□ -2.07
MRPS28Q9Y2Q9 AC021146.2-201ENST00000504736 556 ntBASIC2.15□□□□□ -2.07
MRPS28Q9Y2Q9 HMGB3P3-201ENST00000510526 400 ntBASIC2.15□□□□□ -2.07
MRPS28Q9Y2Q9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.15□□□□□ -2.07
MRPS28Q9Y2Q9 RNU6-327P-201ENST00000516270 127 ntBASIC2.15□□□□□ -2.07
MRPS28Q9Y2Q9 GTF3AP2-201ENST00000557014 266 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms