Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 HSPE1P4-201ENST00000550617 308 ntBASIC3.81□□□□□ -1.8
CDK11AQ9UQ88 AC007375.1-201ENST00000554513 578 ntBASIC3.81□□□□□ -1.8
CDK11AQ9UQ88 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.81□□□□□ -1.8
CDK11AQ9UQ88 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.81□□□□□ -1.8
CDK11AQ9UQ88 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDK11AQ9UQ88 SNORD50.1-201ENST00000362987 71 ntBASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 Y_RNA.394-201ENST00000383942 103 ntBASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 Y_RNA.395-201ENST00000383945 109 ntBASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 Y_RNA.445-201ENST00000384168 102 ntBASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 RNU2-23P-201ENST00000410545 195 ntBASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 RN7SKP61-201ENST00000410642 295 ntBASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 MIR2053-201ENST00000459295 91 ntBASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 Y_RNA.631-201ENST00000459607 101 ntBASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 RN7SL297P-201ENST00000483161 293 ntBASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 RPL17P19-201ENST00000489069 552 ntBASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 RNU6-826P-201ENST00000516827 104 ntBASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 CBX3P8-201ENST00000532412 525 ntBASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 MIR1291-201ENST00000627649 87 ntBASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 AP000560.1-201ENST00000624150 1937 ntBASIC3.8□□□□□ -1.8
CDK11AQ9UQ88 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CDK11AQ9UQ88 AC092268.1-201ENST00000342691 405 ntBASIC3.79□□□□□ -1.8
CDK11AQ9UQ88 SNORA63-201ENST00000363450 132 ntBASIC3.79□□□□□ -1.8
CDK11AQ9UQ88 RNA5SP125-201ENST00000364843 120 ntBASIC3.79□□□□□ -1.8
CDK11AQ9UQ88 RNU6-968P-201ENST00000384076 107 ntBASIC3.79□□□□□ -1.8
CDK11AQ9UQ88 Y_RNA.533-201ENST00000384596 114 ntBASIC3.79□□□□□ -1.8
CDK11AQ9UQ88 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.79□□□□□ -1.8
CDK11AQ9UQ88 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.79□□□□□ -1.8
CDK11AQ9UQ88 RPS12P2-201ENST00000439728 269 ntBASIC3.79□□□□□ -1.8
CDK11AQ9UQ88 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.79□□□□□ -1.8
CDK11AQ9UQ88 AC022447.4-201ENST00000504053 364 ntBASIC3.79□□□□□ -1.8
CDK11AQ9UQ88 AC021269.2-201ENST00000532318 330 ntBASIC3.79□□□□□ -1.8
CDK11AQ9UQ88 SNRPGP18-201ENST00000553000 214 ntBASIC3.79□□□□□ -1.8
CDK11AQ9UQ88 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.79□□□□□ -1.8
CDK11AQ9UQ88 AC233981.2-201ENST00000611524 1614 ntBASIC3.79□□□□□ -1.8
CDK11AQ9UQ88 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CDK11AQ9UQ88 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDK11AQ9UQ88 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
CDK11AQ9UQ88 Y_RNA.48-201ENST00000362710 103 ntBASIC3.78□□□□□ -1.8
CDK11AQ9UQ88 RNY1P16-201ENST00000363063 111 ntBASIC3.78□□□□□ -1.8
CDK11AQ9UQ88 RNU6-595P-201ENST00000363944 107 ntBASIC3.78□□□□□ -1.8
CDK11AQ9UQ88 MIR548P-201ENST00000408336 84 ntBASIC3.78□□□□□ -1.8
CDK11AQ9UQ88 AC244670.1-201ENST00000436879 112 ntBASIC3.78□□□□□ -1.8
CDK11AQ9UQ88 AC079354.2-201ENST00000453523 154 ntBASIC3.78□□□□□ -1.8
CDK11AQ9UQ88 AL139109.1-201ENST00000455491 297 ntBASIC3.78□□□□□ -1.8
CDK11AQ9UQ88 RN7SKP210-201ENST00000459176 261 ntBASIC3.78□□□□□ -1.8
CDK11AQ9UQ88 AC112771.1-201ENST00000463581 102 ntBASIC3.78□□□□□ -1.8
CDK11AQ9UQ88 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.78□□□□□ -1.8
CDK11AQ9UQ88 SUB1P3-201ENST00000564581 315 ntBASIC3.78□□□□□ -1.8
CDK11AQ9UQ88 MIR4769-201ENST00000584126 77 ntBASIC3.78□□□□□ -1.8
CDK11AQ9UQ88 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.78□□□□□ -1.8
CDK11AQ9UQ88 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.78□□□□□ -1.8
CDK11AQ9UQ88 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDK11AQ9UQ88 Y_RNA.138-201ENST00000363462 102 ntBASIC3.77□□□□□ -1.81
CDK11AQ9UQ88 SNORD114-30-201ENST00000364448 72 ntBASIC3.77□□□□□ -1.81
CDK11AQ9UQ88 SNORA67.1-201ENST00000364749 141 ntBASIC3.77□□□□□ -1.81
CDK11AQ9UQ88 Y_RNA.504-201ENST00000384481 104 ntBASIC3.77□□□□□ -1.81
CDK11AQ9UQ88 RNU6-700P-201ENST00000391043 107 ntBASIC3.77□□□□□ -1.81
CDK11AQ9UQ88 RNU2-63P-201ENST00000410792 194 ntBASIC3.77□□□□□ -1.81
CDK11AQ9UQ88 AC243428.1-201ENST00000421099 264 ntBASIC3.77□□□□□ -1.81
CDK11AQ9UQ88 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.77□□□□□ -1.81
CDK11AQ9UQ88 GPM6BP3-201ENST00000442797 145 ntBASIC3.77□□□□□ -1.81
CDK11AQ9UQ88 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.77□□□□□ -1.81
CDK11AQ9UQ88 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.77□□□□□ -1.81
CDK11AQ9UQ88 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.77□□□□□ -1.81
CDK11AQ9UQ88 AC060766.3-201ENST00000591442 263 ntBASIC3.77□□□□□ -1.81
CDK11AQ9UQ88 AL353621.2-201ENST00000605340 133 ntBASIC3.77□□□□□ -1.81
CDK11AQ9UQ88 AC046143.2-201ENST00000609789 160 ntBASIC3.77□□□□□ -1.81
CDK11AQ9UQ88 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.77□□□□□ -1.81
CDK11AQ9UQ88 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDK11AQ9UQ88 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDK11AQ9UQ88 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.77□□□□□ -1.81
CDK11AQ9UQ88 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 RNU6-1115P-201ENST00000362490 106 ntBASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 RNU6-212P-201ENST00000362642 104 ntBASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 RNU6-1285P-201ENST00000363480 105 ntBASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 RNU6-1286P-201ENST00000383871 107 ntBASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 RNU1-52P-201ENST00000384190 164 ntBASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 MIR559-201ENST00000385188 96 ntBASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 RNA5SP210-201ENST00000391034 120 ntBASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 AL353997.1-201ENST00000432936 108 ntBASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 AC099799.1-201ENST00000439809 192 ntBASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 SNORA25.11-201ENST00000515935 105 ntBASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 RNA5SP281-201ENST00000516504 135 ntBASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 AC023442.1-201ENST00000531247 422 ntBASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 AL590705.4-201ENST00000532209 134 ntBASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 AC021231.3-201ENST00000558497 370 ntBASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 AC005014.2-201ENST00000607795 599 ntBASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.76□□□□□ -1.81
CDK11AQ9UQ88 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms