Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 RNU4-55P-201ENST00000410731 137 ntBASIC1.37□□□□□ -2.19
CTSFQ9UBX1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.37□□□□□ -2.19
CTSFQ9UBX1 USP9YP14-201ENST00000430663 563 ntBASIC1.37□□□□□ -2.19
CTSFQ9UBX1 VN1R108P-201ENST00000431580 830 ntBASIC1.37□□□□□ -2.19
CTSFQ9UBX1 AL133396.1-201ENST00000432048 687 ntBASIC1.37□□□□□ -2.19
CTSFQ9UBX1 AL035666.1-201ENST00000446195 348 ntBASIC1.37□□□□□ -2.19
CTSFQ9UBX1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.37□□□□□ -2.19
CTSFQ9UBX1 AC009474.2-201ENST00000451383 136 ntBASIC1.37□□□□□ -2.19
CTSFQ9UBX1 MTCO2P18-201ENST00000457151 658 ntBASIC1.37□□□□□ -2.19
CTSFQ9UBX1 FO393415.2-201ENST00000480085 343 ntBASIC1.37□□□□□ -2.19
CTSFQ9UBX1 AL163540.1-201ENST00000485382 386 ntBASIC1.37□□□□□ -2.19
CTSFQ9UBX1 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.37□□□□□ -2.19
CTSFQ9UBX1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.37□□□□□ -2.19
CTSFQ9UBX1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.37□□□□□ -2.19
CTSFQ9UBX1 AP005597.4-201ENST00000526762 229 ntBASIC1.37□□□□□ -2.19
CTSFQ9UBX1 SUB1P3-201ENST00000564581 315 ntBASIC1.37□□□□□ -2.19
CTSFQ9UBX1 MIR3136-201ENST00000583498 78 ntBASIC1.37□□□□□ -2.19
CTSFQ9UBX1 AP001485.1-201ENST00000604799 199 ntBASIC1.37□□□□□ -2.19
CTSFQ9UBX1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.37□□□□□ -2.19
CTSFQ9UBX1 AC097520.1-201ENST00000624435 385 ntBASIC1.37□□□□□ -2.19
CTSFQ9UBX1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.37□□□□□ -2.19
CTSFQ9UBX1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CTSFQ9UBX1 AP000560.1-201ENST00000624150 1937 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
CTSFQ9UBX1 MTND4P14-201ENST00000435799 1354 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 Y_RNA.167-201ENST00000363735 109 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 Y_RNA.296-201ENST00000364930 108 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 Y_RNA.332-201ENST00000365271 113 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 Y_RNA.378-201ENST00000365652 113 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 SNORD116-9-201ENST00000384000 95 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 SNORD116-3-201ENST00000384287 95 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 SNORD116-1-201ENST00000384335 95 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 SNORD116-7-201ENST00000384404 95 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 SNORD116-5-201ENST00000384462 95 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 Y_RNA.504-201ENST00000384481 104 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 RNU2-41P-201ENST00000410991 178 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 AL590556.1-201ENST00000423231 483 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.36□□□□□ -2.19
CTSFQ9UBX1 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 MTCO3P38-201ENST00000468910 766 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 AC023790.1-201ENST00000482174 347 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 AC132942.1-201ENST00000486753 483 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 AC005741.1-201ENST00000511094 432 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 Y_RNA.675-201ENST00000516389 149 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 RNA5SP490-201ENST00000517141 136 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 MTND4P7-201ENST00000523876 130 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 AC109446.1-201ENST00000566172 220 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.36□□□□□ -2.19
CTSFQ9UBX1 MIR3611-201ENST00000584484 83 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 AC004223.2-201ENST00000590309 544 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 AC087683.1-201ENST00000591187 441 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 ZNF209P-201ENST00000593450 2304 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 Z98751.3-201ENST00000604447 521 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 AC064836.2-201ENST00000609491 462 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 PCGEM1.1-201ENST00000613431 131 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
CTSFQ9UBX1 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
CTSFQ9UBX1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CTSFQ9UBX1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.35□□□□□ -2.19
CTSFQ9UBX1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CTSFQ9UBX1 RNU6-26P-201ENST00000383985 107 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 RNU6-38P-201ENST00000384085 107 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 RNU6-160P-201ENST00000384591 107 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 MIR320A-201ENST00000385302 82 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.35□□□□□ -2.19
CTSFQ9UBX1 AL606923.1-201ENST00000406616 190 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.35□□□□□ -2.19
CTSFQ9UBX1 MTCO3P46-201ENST00000425787 232 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 AC078809.1-201ENST00000427601 140 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.35□□□□□ -2.19
CTSFQ9UBX1 TPTE2P5-203ENST00000458118 728 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 RNU6-333P-201ENST00000459117 107 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 AC007547.1-201ENST00000462177 490 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 RPS29P27-201ENST00000463711 170 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.35□□□□□ -2.19
CTSFQ9UBX1 SNORA14.1-201ENST00000516113 141 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 AC104383.1-201ENST00000530297 370 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.35□□□□□ -2.19
CTSFQ9UBX1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.35□□□□□ -2.19
CTSFQ9UBX1 MIR4421-201ENST00000578133 69 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 AL359821.1-201ENST00000605519 182 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 AP000654.2-201ENST00000605633 586 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 AP001330.5-201ENST00000607176 411 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 AC017083.3-201ENST00000609955 700 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 AC139792.3-201ENST00000623525 224 ntBASIC1.35□□□□□ -2.19
CTSFQ9UBX1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.35□□□□□ -2.19
CTSFQ9UBX1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CTSFQ9UBX1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.34□□□□□ -2.19
CTSFQ9UBX1 RNU6-23P-201ENST00000363283 107 ntBASIC1.34□□□□□ -2.19
CTSFQ9UBX1 AP000275.1-201ENST00000411943 390 ntBASIC1.34□□□□□ -2.19
CTSFQ9UBX1 AC004965.1-201ENST00000413033 213 ntBASIC1.34□□□□□ -2.19
CTSFQ9UBX1 RPL30P13-201ENST00000418873 348 ntBASIC1.34□□□□□ -2.19
CTSFQ9UBX1 SDAD1P3-201ENST00000427380 333 ntBASIC1.34□□□□□ -2.19
CTSFQ9UBX1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.34□□□□□ -2.19
CTSFQ9UBX1 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.34□□□□□ -2.19
CTSFQ9UBX1 MTCO1P44-201ENST00000441935 243 ntBASIC1.34□□□□□ -2.19
CTSFQ9UBX1 SNRPEP8-201ENST00000442866 260 ntBASIC1.34□□□□□ -2.19
CTSFQ9UBX1 AC245517.4-201ENST00000448601 281 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms