Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AP001025.1-201ENST00000486139 332 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 RPL30P1-201ENST00000488676 339 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 AC083906.5-201ENST00000503722 328 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 ANXA2P1-201ENST00000505539 926 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.01□□□□□ -1.93
DKK3Q9UBP4 ACA59.2-201ENST00000517061 156 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.01□□□□□ -1.93
DKK3Q9UBP4 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.01□□□□□ -1.93
DKK3Q9UBP4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.01□□□□□ -1.93
DKK3Q9UBP4 RAC1P9-201ENST00000604990 392 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.01□□□□□ -1.93
DKK3Q9UBP4 AC096644.4-201ENST00000563417 2912 ntBASIC3.01□□□□□ -1.93
DKK3Q9UBP4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
DKK3Q9UBP4 RNU5B-2P-201ENST00000363036 113 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 Y_RNA.358-201ENST00000365491 99 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 RNU6-622P-201ENST00000384272 103 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 RNY3P4-201ENST00000384428 101 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 RNU6-1222P-201ENST00000384615 107 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 MIR767-201ENST00000390228 109 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 AC023141.4-201ENST00000412031 328 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 AL590556.1-201ENST00000423231 483 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 CBX3P6-201ENST00000430257 527 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 Z82188.1-201ENST00000436709 154 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3□□□□□ -1.93
DKK3Q9UBP4 AL353705.4-201ENST00000449661 238 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 UBL5P3-201ENST00000475112 231 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 AC107032.1-201ENST00000485945 480 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 AC132942.1-201ENST00000486753 483 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3□□□□□ -1.93
DKK3Q9UBP4 AP002770.2-201ENST00000543613 532 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3□□□□□ -1.93
DKK3Q9UBP4 AC090617.3-201ENST00000573670 475 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 MIR5571-201ENST00000577998 113 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 MIR3162-201ENST00000581818 82 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3□□□□□ -1.93
DKK3Q9UBP4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 AC007318.2-201ENST00000620999 243 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 SNORA43.4-201ENST00000629559 138 ntBASIC3□□□□□ -1.93
DKK3Q9UBP4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3□□□□□ -1.93
DKK3Q9UBP4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3□□□□□ -1.93
DKK3Q9UBP4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3□□□□□ -1.93
DKK3Q9UBP4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3□□□□□ -1.93
DKK3Q9UBP4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3□□□□□ -1.93
DKK3Q9UBP4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
DKK3Q9UBP4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
DKK3Q9UBP4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
DKK3Q9UBP4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.99□□□□□ -1.93
DKK3Q9UBP4 RNU6-770P-201ENST00000363929 105 ntBASIC2.99□□□□□ -1.93
DKK3Q9UBP4 Y_RNA.188-201ENST00000363952 111 ntBASIC2.99□□□□□ -1.93
DKK3Q9UBP4 SNORA29-201ENST00000384183 140 ntBASIC2.99□□□□□ -1.93
DKK3Q9UBP4 MIR544A-201ENST00000384855 91 ntBASIC2.99□□□□□ -1.93
DKK3Q9UBP4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.99□□□□□ -1.93
DKK3Q9UBP4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.99□□□□□ -1.93
DKK3Q9UBP4 AC092427.1-202ENST00000430569 476 ntBASIC2.99□□□□□ -1.93
DKK3Q9UBP4 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.99□□□□□ -1.93
DKK3Q9UBP4 AL161651.1-201ENST00000440882 223 ntBASIC2.99□□□□□ -1.93
DKK3Q9UBP4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.99□□□□□ -1.93
DKK3Q9UBP4 RPS27AP9-201ENST00000477681 438 ntBASIC2.99□□□□□ -1.93
DKK3Q9UBP4 AC016632.1-201ENST00000503994 196 ntBASIC2.99□□□□□ -1.93
DKK3Q9UBP4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.99□□□□□ -1.93
DKK3Q9UBP4 AC091874.1-201ENST00000511402 339 ntBASIC2.99□□□□□ -1.93
DKK3Q9UBP4 RNU5F-8P-201ENST00000515941 111 ntBASIC2.99□□□□□ -1.93
DKK3Q9UBP4 RNA5SP76-201ENST00000516277 87 ntBASIC2.99□□□□□ -1.93
DKK3Q9UBP4 RNU6-897P-201ENST00000517135 105 ntBASIC2.99□□□□□ -1.93
DKK3Q9UBP4 RNU6-794P-201ENST00000517261 64 ntBASIC2.99□□□□□ -1.93
DKK3Q9UBP4 AC090517.1-201ENST00000569307 266 ntBASIC2.99□□□□□ -1.93
DKK3Q9UBP4 AC090897.2-201ENST00000581715 130 ntBASIC2.99□□□□□ -1.93
DKK3Q9UBP4 AC125232.2-201ENST00000592457 143 ntBASIC2.99□□□□□ -1.93
DKK3Q9UBP4 AC137590.2-201ENST00000619709 240 ntBASIC2.99□□□□□ -1.93
DKK3Q9UBP4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.99□□□□□ -1.93
DKK3Q9UBP4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
DKK3Q9UBP4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
DKK3Q9UBP4 RNU6-137P-201ENST00000363680 108 ntBASIC2.98□□□□□ -1.93
DKK3Q9UBP4 Y_RNA.183-201ENST00000363882 113 ntBASIC2.98□□□□□ -1.93
DKK3Q9UBP4 Y_RNA.471-201ENST00000384312 102 ntBASIC2.98□□□□□ -1.93
DKK3Q9UBP4 Y_RNA.512-201ENST00000384518 102 ntBASIC2.98□□□□□ -1.93
DKK3Q9UBP4 RNU6-713P-201ENST00000384761 107 ntBASIC2.98□□□□□ -1.93
DKK3Q9UBP4 MIR153-2-201ENST00000385225 87 ntBASIC2.98□□□□□ -1.93
DKK3Q9UBP4 RPEP5-201ENST00000441137 268 ntBASIC2.98□□□□□ -1.93
DKK3Q9UBP4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.98□□□□□ -1.93
DKK3Q9UBP4 Y_RNA.638-201ENST00000459374 113 ntBASIC2.98□□□□□ -1.93
DKK3Q9UBP4 RPL31P41-201ENST00000477967 372 ntBASIC2.98□□□□□ -1.93
DKK3Q9UBP4 AF186996.7-201ENST00000492781 209 ntBASIC2.98□□□□□ -1.93
DKK3Q9UBP4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.98□□□□□ -1.93
DKK3Q9UBP4 RNU6-408P-201ENST00000515910 100 ntBASIC2.98□□□□□ -1.93
DKK3Q9UBP4 RNY3P15-201ENST00000516297 97 ntBASIC2.98□□□□□ -1.93
DKK3Q9UBP4 RNU5B-3P-201ENST00000516601 115 ntBASIC2.98□□□□□ -1.93
DKK3Q9UBP4 RNU6-91P-201ENST00000607774 107 ntBASIC2.98□□□□□ -1.93
DKK3Q9UBP4 AC062037.2-201ENST00000610137 73 ntBASIC2.98□□□□□ -1.93
DKK3Q9UBP4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
DKK3Q9UBP4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
DKK3Q9UBP4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
DKK3Q9UBP4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.97□□□□□ -1.93
DKK3Q9UBP4 OR56A5-201ENST00000340110 738 ntBASIC2.97□□□□□ -1.93
DKK3Q9UBP4 AC092268.1-201ENST00000342691 405 ntBASIC2.97□□□□□ -1.93
DKK3Q9UBP4 RNA5SP393-201ENST00000363423 117 ntBASIC2.97□□□□□ -1.93
DKK3Q9UBP4 RNU6-1285P-201ENST00000363480 105 ntBASIC2.97□□□□□ -1.93
DKK3Q9UBP4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
DKK3Q9UBP4 RNU6-708P-201ENST00000384217 107 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms