Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC007375.1-201ENST00000554513 578 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 AC004584.2-201ENST00000570407 410 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 AL049779.4-201ENST00000604500 156 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 SCARNA17.4-201ENST00000614296 143 ntBASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SMARCAL1Q9NZC9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 RNU6-874P-201ENST00000362390 105 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 Y_RNA.364-201ENST00000365532 101 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 RNU6-1286P-201ENST00000383871 107 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 Y_RNA.405-201ENST00000383979 100 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 RNU6-1032P-201ENST00000384100 107 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 SNORA29-201ENST00000384183 140 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 Y_RNA.451-201ENST00000384200 100 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 Y_RNA.524-201ENST00000384564 100 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 Y_RNA.561-201ENST00000384694 100 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 AL358453.1-201ENST00000422522 250 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 MTND2P23-201ENST00000422990 651 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 Z98742.2-201ENST00000431564 187 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 RPS15AP28-201ENST00000435088 386 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 AC244670.1-201ENST00000436879 112 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 AC099799.1-201ENST00000439809 192 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 GPM6BP3-201ENST00000442797 145 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 AC104389.3-201ENST00000445629 235 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 AL353705.4-201ENST00000449661 238 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 RNU7-169P-201ENST00000459456 61 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 RPL23AP75-201ENST00000491601 451 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 AF186996.7-201ENST00000492781 209 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 RNA5SP148-201ENST00000516527 94 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 MIR3117-201ENST00000584034 78 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 AC010928.2-201ENST00000588017 287 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 U4.3-201ENST00000621047 82 ntBASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.46□□□□□ -2.02
SMARCAL1Q9NZC9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 RNU6-212P-201ENST00000362642 104 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 Y_RNA.40-201ENST00000362645 93 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 RNU6-1285P-201ENST00000363480 105 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 SNORA63C-201ENST00000364578 129 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 SNORA67.1-201ENST00000364749 141 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 Y_RNA.500-201ENST00000384466 111 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 RNU6-738P-201ENST00000384531 106 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 RNU6-1072P-201ENST00000384703 107 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 RNU6-443P-201ENST00000384780 107 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 SNORA12.2-201ENST00000391040 156 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 RNU6-700P-201ENST00000391043 107 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 snosnR66.1-201ENST00000391095 99 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 MRPL42P3-201ENST00000401492 326 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 AC007064.1-201ENST00000412238 351 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 AC113618.1-201ENST00000416747 285 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 WARS2P1-201ENST00000429678 537 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 OSTCP8-201ENST00000445117 448 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 AL353752.1-201ENST00000454946 260 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 TOMM22P6-201ENST00000465035 409 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 RPL30P10-201ENST00000488148 337 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 RNU6-327P-201ENST00000516270 127 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 RNU4-77P-201ENST00000516692 156 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 SNORA31.16-201ENST00000516773 139 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 AC105137.2-201ENST00000569073 466 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 AC006504.6-201ENST00000590142 199 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 AL356157.2-201ENST00000605122 111 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 AC116312.1-201ENST00000606841 314 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 RNU6-91P-201ENST00000607774 107 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 PART1_1.1-201ENST00000611761 217 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 AC087588.2-201ENST00000617667 426 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 AL450472.1-202ENST00000637286 180 ntBASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.45□□□□□ -2.02
SMARCAL1Q9NZC9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 SNORD114-19-201ENST00000363072 75 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 SNORA68.1-201ENST00000364537 132 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 RNU6-639P-201ENST00000384074 107 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 RNU6-1160P-201ENST00000384546 104 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 RNU2-23P-201ENST00000410545 195 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 RN7SKP61-201ENST00000410642 295 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 EIF1AXP1-201ENST00000419267 435 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 MTCYBP10-201ENST00000424905 650 ntBASIC2.44□□□□□ -2.02
SMARCAL1Q9NZC9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms