Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 AC016925.1-201ENST00000458303 298 ntBASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 RPS23P5-201ENST00000495419 428 ntBASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 HMGB3P17-201ENST00000504195 649 ntBASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 RNVU1-2-201ENST00000516326 135 ntBASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 AC091544.4-201ENST00000555268 342 ntBASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 MIR4713-201ENST00000582691 75 ntBASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 FGF7P1-201ENST00000582820 288 ntBASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 MIR8076-201ENST00000611401 83 ntBASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 AC093783.1-201ENST00000612976 329 ntBASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 AC022513.1-201ENST00000624512 117 ntBASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.78□□□□□ -2.12
ZCCHC3Q9NUD5 AC233981.2-201ENST00000611524 1614 ntBASIC1.77□□□□□ -2.13
ZCCHC3Q9NUD5 U8.2-201ENST00000363156 134 ntBASIC1.77□□□□□ -2.13
ZCCHC3Q9NUD5 RNU6-1090P-201ENST00000364065 94 ntBASIC1.77□□□□□ -2.13
ZCCHC3Q9NUD5 Y_RNA.373-201ENST00000365600 103 ntBASIC1.77□□□□□ -2.13
ZCCHC3Q9NUD5 AC139712.2-201ENST00000424302 339 ntBASIC1.77□□□□□ -2.13
ZCCHC3Q9NUD5 AL645568.3-201ENST00000433683 316 ntBASIC1.77□□□□□ -2.13
ZCCHC3Q9NUD5 RNA5SP57-201ENST00000459463 123 ntBASIC1.77□□□□□ -2.13
ZCCHC3Q9NUD5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.77□□□□□ -2.13
ZCCHC3Q9NUD5 DEFB131C-201ENST00000528817 165 ntBASIC1.77□□□□□ -2.13
ZCCHC3Q9NUD5 AC109635.3-201ENST00000529536 185 ntBASIC1.77□□□□□ -2.13
ZCCHC3Q9NUD5 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.77□□□□□ -2.13
ZCCHC3Q9NUD5 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.77□□□□□ -2.13
ZCCHC3Q9NUD5 MIR4648-201ENST00000580107 72 ntBASIC1.77□□□□□ -2.13
ZCCHC3Q9NUD5 AC005786.1-201ENST00000588553 154 ntBASIC1.77□□□□□ -2.13
ZCCHC3Q9NUD5 CTHRC1P1-201ENST00000605383 469 ntBASIC1.77□□□□□ -2.13
ZCCHC3Q9NUD5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.77□□□□□ -2.13
ZCCHC3Q9NUD5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.77□□□□□ -2.13
ZCCHC3Q9NUD5 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.77□□□□□ -2.13
ZCCHC3Q9NUD5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
ZCCHC3Q9NUD5 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
ZCCHC3Q9NUD5 RNU6-562P-201ENST00000362731 107 ntBASIC1.76□□□□□ -2.13
ZCCHC3Q9NUD5 RNU4-40P-201ENST00000364351 143 ntBASIC1.76□□□□□ -2.13
ZCCHC3Q9NUD5 Y_RNA.318-201ENST00000365131 97 ntBASIC1.76□□□□□ -2.13
ZCCHC3Q9NUD5 SNORA18.2-201ENST00000383865 132 ntBASIC1.76□□□□□ -2.13
ZCCHC3Q9NUD5 RNU6-784P-201ENST00000384330 106 ntBASIC1.76□□□□□ -2.13
ZCCHC3Q9NUD5 MIR521-1-201ENST00000384902 87 ntBASIC1.76□□□□□ -2.13
ZCCHC3Q9NUD5 MTCO1P21-201ENST00000416634 589 ntBASIC1.76□□□□□ -2.13
ZCCHC3Q9NUD5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.76□□□□□ -2.13
ZCCHC3Q9NUD5 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.76□□□□□ -2.13
ZCCHC3Q9NUD5 AC130509.1-201ENST00000464158 433 ntBASIC1.76□□□□□ -2.13
ZCCHC3Q9NUD5 MRPS36P4-201ENST00000534436 298 ntBASIC1.76□□□□□ -2.13
ZCCHC3Q9NUD5 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.76□□□□□ -2.13
ZCCHC3Q9NUD5 ANP32BP3-201ENST00000559213 706 ntBASIC1.76□□□□□ -2.13
ZCCHC3Q9NUD5 EIF1P4-201ENST00000572664 335 ntBASIC1.76□□□□□ -2.13
ZCCHC3Q9NUD5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.76□□□□□ -2.13
ZCCHC3Q9NUD5 AL133215.3-201ENST00000609801 448 ntBASIC1.76□□□□□ -2.13
ZCCHC3Q9NUD5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.76□□□□□ -2.13
ZCCHC3Q9NUD5 SNORA16.1-201ENST00000364597 132 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 Y_RNA.402-201ENST00000383972 102 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 RNU6-968P-201ENST00000384076 107 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 RNU6-933P-201ENST00000384424 107 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 Y_RNA.530-201ENST00000384587 101 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 RNA5SP494-201ENST00000410653 129 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 RNA5SP100-201ENST00000410903 110 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 RNA5SP59-201ENST00000410922 110 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 RNA5SP489-201ENST00000410986 109 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 VN1R36P-201ENST00000414936 291 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 MTCO1P44-201ENST00000441935 243 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 SNORA59A-201ENST00000459326 152 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 RNU7-66P-201ENST00000459469 62 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 RN7SL274P-201ENST00000492268 272 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 TRBVA-201ENST00000498804 316 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 AC096745.1-201ENST00000509945 370 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 RNU6-720P-201ENST00000516363 108 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 ZNF519P2-201ENST00000557032 169 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 AC010900.2-201ENST00000604508 210 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 AC024614.3-201ENST00000637860 256 ntBASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
ZCCHC3Q9NUD5 AC092881.1-201ENST00000638218 2733 ntBASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 RNU6-332P-201ENST00000391193 108 ntBASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 AC019129.1-201ENST00000403786 261 ntBASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 AL033519.2-201ENST00000403958 392 ntBASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 AL445685.2-201ENST00000422551 342 ntBASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 RPL31P63-201ENST00000422565 375 ntBASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 MTCO3P46-201ENST00000425787 232 ntBASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 RNU7-187P-201ENST00000458985 68 ntBASIC1.74□□□□□ -2.13
ZCCHC3Q9NUD5 AF186996.7-201ENST00000492781 209 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms