Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 Y_RNA.151-201ENST00000363566 112 ntBASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 MT-TL1-201ENST00000386347 75 ntBASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 SNORA46.1-201ENST00000391069 153 ntBASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 RNU6-325P-201ENST00000411132 105 ntBASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 EIF1AXP1-201ENST00000419267 435 ntBASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 RPL9P9-202ENST00000466501 579 ntBASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 AC107032.1-201ENST00000485945 480 ntBASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 MIR4769-201ENST00000584126 77 ntBASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 AC078795.3-201ENST00000602913 472 ntBASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 AL078605.1-201ENST00000603529 500 ntBASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 AC005520.5-201ENST00000613926 164 ntBASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SMC4Q9NTJ3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 Y_RNA.135-201ENST00000363439 95 ntBASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 SNORD116-11-201ENST00000383882 92 ntBASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 MIR29C-201ENST00000385231 88 ntBASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 MIR1294-201ENST00000408503 142 ntBASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 AL030996.1-201ENST00000411430 235 ntBASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 MTND3P9-201ENST00000429526 346 ntBASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 GPM6BP3-201ENST00000442797 145 ntBASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 AC245102.2-201ENST00000448956 180 ntBASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 PRELID3BP1-201ENST00000457142 540 ntBASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 RNU6-329P-201ENST00000459618 107 ntBASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 AC055731.1-201ENST00000474387 401 ntBASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 AC104564.1-201ENST00000493028 407 ntBASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 MTCO1P29-201ENST00000496868 288 ntBASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 CYP4A27P-201ENST00000567218 190 ntBASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 CPDP1-201ENST00000579660 283 ntBASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 AC022202.1-201ENST00000613515 211 ntBASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 AC009033.1-201ENST00000624279 431 ntBASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 ZNF355P-201ENST00000427301 3216 ntBASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.5□□□□□ -2.01
SMC4Q9NTJ3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SMC4Q9NTJ3 SNORD114-1-201ENST00000362705 72 ntBASIC2.49□□□□□ -2.01
SMC4Q9NTJ3 Y_RNA.160-201ENST00000363677 92 ntBASIC2.49□□□□□ -2.01
SMC4Q9NTJ3 SNORA36A-201ENST00000384221 132 ntBASIC2.49□□□□□ -2.01
SMC4Q9NTJ3 Y_RNA.504-201ENST00000384481 104 ntBASIC2.49□□□□□ -2.01
SMC4Q9NTJ3 RNU6-876P-201ENST00000391295 104 ntBASIC2.49□□□□□ -2.01
SMC4Q9NTJ3 RNU2-20P-201ENST00000410425 191 ntBASIC2.49□□□□□ -2.01
SMC4Q9NTJ3 AL645568.3-201ENST00000433683 316 ntBASIC2.49□□□□□ -2.01
SMC4Q9NTJ3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.49□□□□□ -2.01
SMC4Q9NTJ3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.49□□□□□ -2.01
SMC4Q9NTJ3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.49□□□□□ -2.01
SMC4Q9NTJ3 AC023043.2-201ENST00000589678 1026 ntBASIC2.49□□□□□ -2.01
SMC4Q9NTJ3 Z98751.3-201ENST00000604447 521 ntBASIC2.49□□□□□ -2.01
SMC4Q9NTJ3 AP000654.2-201ENST00000605633 586 ntBASIC2.49□□□□□ -2.01
SMC4Q9NTJ3 MIR3976-201ENST00000606807 139 ntBASIC2.49□□□□□ -2.01
SMC4Q9NTJ3 AL359314.1-201ENST00000616913 261 ntBASIC2.49□□□□□ -2.01
SMC4Q9NTJ3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SMC4Q9NTJ3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.49□□□□□ -2.01
SMC4Q9NTJ3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SMC4Q9NTJ3 AL359851.1-201ENST00000569460 4997 ntBASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 AC009161.1-201ENST00000417306 376 ntBASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 Y_RNA.638-201ENST00000459374 113 ntBASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 PTP4A1P4-201ENST00000512479 322 ntBASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 RNU6-965P-201ENST00000516721 96 ntBASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 MIR4742-201ENST00000581069 85 ntBASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 PCGEM1.1-201ENST00000613431 131 ntBASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 AC098657.3-201ENST00000620434 263 ntBASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 DUXAP9-208ENST00000622815 614 ntBASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 CENPCP1-201ENST00000533085 2578 ntBASIC2.48□□□□□ -2.01
SMC4Q9NTJ3 AC009541.1-201ENST00000438279 2662 ntBASIC2.47□□□□□ -2.01
SMC4Q9NTJ3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.47□□□□□ -2.01
SMC4Q9NTJ3 RNU6-562P-201ENST00000362731 107 ntBASIC2.47□□□□□ -2.01
SMC4Q9NTJ3 Y_RNA.99-201ENST00000363138 105 ntBASIC2.47□□□□□ -2.01
SMC4Q9NTJ3 SNORD14D-201ENST00000384390 87 ntBASIC2.47□□□□□ -2.01
SMC4Q9NTJ3 MIR518A2-201ENST00000384966 87 ntBASIC2.47□□□□□ -2.01
SMC4Q9NTJ3 AC019129.1-201ENST00000403786 261 ntBASIC2.47□□□□□ -2.01
SMC4Q9NTJ3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.47□□□□□ -2.01
SMC4Q9NTJ3 AC096745.1-201ENST00000509945 370 ntBASIC2.47□□□□□ -2.01
SMC4Q9NTJ3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.47□□□□□ -2.01
SMC4Q9NTJ3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.47□□□□□ -2.01
SMC4Q9NTJ3 AC093913.1-201ENST00000614178 329 ntBASIC2.47□□□□□ -2.01
SMC4Q9NTJ3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.47□□□□□ -2.01
SMC4Q9NTJ3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.47□□□□□ -2.01
SMC4Q9NTJ3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 210 ms