Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 Z99497.2-201ENST00000603634 310 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 MIR6748-201ENST00000610433 71 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 MIR6862-1-201ENST00000613016 70 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 MIR6862-2-201ENST00000614755 70 ntBASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
CDC42SE1Q9NRR8 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.28□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6-457P-201ENST00000363999 107 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6-501P-201ENST00000364072 100 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 RNU4-48P-201ENST00000365559 182 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 SNORA20.2-201ENST00000383922 131 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6-74P-201ENST00000384235 107 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 Y_RNA.480-201ENST00000384364 102 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 MIR532-201ENST00000385025 91 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 SNORA16.2-201ENST00000390991 127 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AL355143.1-201ENST00000407101 841 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AL807761.1-201ENST00000417622 171 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 MTCO2P23-201ENST00000425216 680 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AC104850.1-201ENST00000435940 476 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AC005002.2-201ENST00000438228 269 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AC004386.2-201ENST00000441858 148 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AL031274.1-201ENST00000450334 232 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AL049830.1-201ENST00000468034 425 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 SNORD27.1-201ENST00000516319 72 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AC025647.1-201ENST00000517879 253 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AP003484.1-201ENST00000530974 250 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 CBX3P8-201ENST00000532412 525 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 MIR4421-201ENST00000578133 69 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 MIR5195-201ENST00000583555 115 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AC068790.6-201ENST00000602558 258 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AC146944.4-201ENST00000602697 718 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AL590095.2-201ENST00000604136 117 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AC007179.3-201ENST00000604976 235 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AC002044.1-201ENST00000606707 158 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 MIR6857-201ENST00000613267 93 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 TCL6_2.1-201ENST00000615162 119 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AC073349.3-201ENST00000617616 186 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AC006386.2-201ENST00000624491 75 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 AC012005.1-201ENST00000624575 75 ntBASIC0.27□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6-1287P-201ENST00000362914 107 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 RNA5SP190-201ENST00000365222 118 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6-945P-201ENST00000383947 107 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6-1060P-201ENST00000384664 107 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6-906P-201ENST00000384700 70 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 MIR586-201ENST00000385035 97 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 MIR122-201ENST00000385044 85 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 RNA5SP323-201ENST00000391094 133 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 MRPL42P3-201ENST00000401492 326 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 AL355796.1-201ENST00000406706 323 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 RPS26P42-201ENST00000413485 326 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 AL596276.1-201ENST00000434465 418 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 RPEP5-201ENST00000441137 268 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 AC009237.7-201ENST00000447357 229 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 AP003072.2-201ENST00000527756 676 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 AC022878.1-201ENST00000530684 149 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 AC016256.1-201ENST00000547971 354 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 AC018659.1-201ENST00000551083 169 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 AC026470.2-201ENST00000561492 181 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 PCMTD1P2-201ENST00000565017 355 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 AGGF1P4-201ENST00000568249 801 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 MIR4781-201ENST00000585250 76 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 AC112191.3-201ENST00000604371 277 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 AC097065.2-201ENST00000608159 533 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 AC018645.2-201ENST00000609151 472 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 MIR6078-201ENST00000611069 100 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 AC006133.1-201ENST00000617106 264 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 DLEU1_1.1-201ENST00000618107 190 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 AL359697.1-201ENST00000624879 587 ntBASIC0.26□□□□□ -2.37
CDC42SE1Q9NRR8 CASC19-280ENST00000642102 1351 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6-500P-201ENST00000362349 107 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6-199P-201ENST00000362954 107 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 SNORD113-6-201ENST00000363345 75 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 U3.8-201ENST00000363675 217 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 SNORD116-13-201ENST00000384408 92 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6-1127P-201ENST00000384580 107 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 MIR10B-201ENST00000385011 110 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 RNU11-5P-201ENST00000391216 129 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 AL034345.1-201ENST00000407768 123 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6-57P-201ENST00000411348 103 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 AC016769.2-201ENST00000414815 475 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 AC244023.1-201ENST00000426884 112 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 Z82205.1-201ENST00000428456 297 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 AC245047.3-201ENST00000429428 127 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 AL512286.1-201ENST00000439244 400 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms