Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 snoU13.15-201ENST00000459407 104 ntBASIC1.33□□□□□ -2.2
HMG20AQ9NP66 TOMM22P6-201ENST00000465035 409 ntBASIC1.33□□□□□ -2.2
HMG20AQ9NP66 RPL9P9-202ENST00000466501 579 ntBASIC1.33□□□□□ -2.2
HMG20AQ9NP66 Y_RNA.654-201ENST00000497848 106 ntBASIC1.33□□□□□ -2.2
HMG20AQ9NP66 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
HMG20AQ9NP66 RNU6-1332P-201ENST00000516666 104 ntBASIC1.33□□□□□ -2.2
HMG20AQ9NP66 DEFB131C-201ENST00000528817 165 ntBASIC1.33□□□□□ -2.2
HMG20AQ9NP66 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.33□□□□□ -2.2
HMG20AQ9NP66 MRPS36P4-201ENST00000534436 298 ntBASIC1.33□□□□□ -2.2
HMG20AQ9NP66 GNAI2P1-201ENST00000541815 315 ntBASIC1.33□□□□□ -2.2
HMG20AQ9NP66 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.33□□□□□ -2.2
HMG20AQ9NP66 AC021231.3-201ENST00000558497 370 ntBASIC1.33□□□□□ -2.2
HMG20AQ9NP66 MIR3169-201ENST00000578032 83 ntBASIC1.33□□□□□ -2.2
HMG20AQ9NP66 SNORA59B-202ENST00000578183 701 ntBASIC1.33□□□□□ -2.2
HMG20AQ9NP66 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.33□□□□□ -2.2
HMG20AQ9NP66 MIR3945-201ENST00000581853 98 ntBASIC1.33□□□□□ -2.2
HMG20AQ9NP66 AC010525.2-201ENST00000590920 195 ntBASIC1.33□□□□□ -2.2
HMG20AQ9NP66 BNIP3P25-201ENST00000596023 559 ntBASIC1.33□□□□□ -2.2
HMG20AQ9NP66 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.33□□□□□ -2.2
HMG20AQ9NP66 CTHRC1P1-201ENST00000605383 469 ntBASIC1.33□□□□□ -2.2
HMG20AQ9NP66 RNU6-89P-201ENST00000606519 100 ntBASIC1.33□□□□□ -2.2
HMG20AQ9NP66 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.33□□□□□ -2.2
HMG20AQ9NP66 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HMG20AQ9NP66 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMG20AQ9NP66 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
HMG20AQ9NP66 Y_RNA.38-201ENST00000362617 102 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 RNU6-23P-201ENST00000363283 107 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 U3.9-201ENST00000363823 204 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 RNU6-1090P-201ENST00000364065 94 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 RNU4-24P-201ENST00000364565 139 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 Y_RNA.332-201ENST00000365271 113 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 Y_RNA.481-201ENST00000384373 102 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
HMG20AQ9NP66 MIR208B-201ENST00000401172 77 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 AL033519.2-201ENST00000403958 392 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.32□□□□□ -2.2
HMG20AQ9NP66 MRPS10P2-201ENST00000431226 381 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 MTND2P29-201ENST00000438595 412 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 AC245102.2-201ENST00000448956 180 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 AL513124.1-201ENST00000450410 614 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.32□□□□□ -2.2
HMG20AQ9NP66 RNA5SP57-201ENST00000459463 123 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 RNU6-1037P-201ENST00000459571 107 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 AC007547.1-201ENST00000462177 490 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.32□□□□□ -2.2
HMG20AQ9NP66 AC087854.1-201ENST00000519706 414 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 EIF4A1P12-201ENST00000551910 141 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 AC024909.2-201ENST00000553035 286 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 AL157687.1-201ENST00000554853 619 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.32□□□□□ -2.2
HMG20AQ9NP66 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.32□□□□□ -2.2
HMG20AQ9NP66 MIR3683-201ENST00000580847 82 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.32□□□□□ -2.2
HMG20AQ9NP66 AL356157.2-201ENST00000605122 111 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 AC104458.1-201ENST00000608243 463 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 OR4G1P-203ENST00000641984 1631 ntBASIC1.32□□□□□ -2.2
HMG20AQ9NP66 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.32□□□□□ -2.2
HMG20AQ9NP66 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.31□□□□□ -2.2
HMG20AQ9NP66 RNU6-1252P-201ENST00000363054 104 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 Y_RNA.231-201ENST00000364358 102 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 RNU4-56P-201ENST00000364700 142 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 RNU6-1093P-201ENST00000391194 107 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 AL357139.1-201ENST00000407792 426 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 RNU6-908P-201ENST00000410160 94 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 RNU6-325P-201ENST00000411132 105 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 MTCO3P41-201ENST00000414801 328 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 AC012306.1-201ENST00000423267 114 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 AC139712.2-201ENST00000424302 339 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.31□□□□□ -2.2
HMG20AQ9NP66 SDAD1P3-201ENST00000427380 333 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 AC015922.2-201ENST00000435593 184 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.31□□□□□ -2.2
HMG20AQ9NP66 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.31□□□□□ -2.2
HMG20AQ9NP66 MTCO2P7-201ENST00000446518 666 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 FTH1P25-201ENST00000447665 469 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.31□□□□□ -2.2
HMG20AQ9NP66 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.31□□□□□ -2.2
HMG20AQ9NP66 AC130509.1-201ENST00000464158 433 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.31□□□□□ -2.2
HMG20AQ9NP66 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.31□□□□□ -2.2
HMG20AQ9NP66 AC116337.1-201ENST00000509680 687 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 RNU6-1281P-201ENST00000516223 105 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.31□□□□□ -2.2
HMG20AQ9NP66 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.31□□□□□ -2.2
HMG20AQ9NP66 AC245505.1-201ENST00000556398 224 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 CYP4A27P-201ENST00000567218 190 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 BX248123.2-201ENST00000606318 124 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 RMST_3.1-201ENST00000611651 109 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 AC130454.1-201ENST00000622948 401 ntBASIC1.31□□□□□ -2.2
HMG20AQ9NP66 FER-210ENST00000628534 558 ntTSL 5 BASIC1.31□□□□□ -2.2
HMG20AQ9NP66 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
HMG20AQ9NP66 RNU6-227P-201ENST00000362865 103 ntBASIC1.3□□□□□ -2.2
HMG20AQ9NP66 Y_RNA.123-201ENST00000363338 102 ntBASIC1.3□□□□□ -2.2
HMG20AQ9NP66 Y_RNA.373-201ENST00000365600 103 ntBASIC1.3□□□□□ -2.2
HMG20AQ9NP66 SNORA18.2-201ENST00000383865 132 ntBASIC1.3□□□□□ -2.2
HMG20AQ9NP66 SNORA29-201ENST00000384183 140 ntBASIC1.3□□□□□ -2.2
HMG20AQ9NP66 RNU6-160P-201ENST00000384591 107 ntBASIC1.3□□□□□ -2.2
HMG20AQ9NP66 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
HMG20AQ9NP66 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.3□□□□□ -2.2
HMG20AQ9NP66 OOSP1P1-201ENST00000423265 274 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms