Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 SNORD98-201ENST00000636377 67 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 MIR1244-2-201ENST00000636449 85 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 MIR1244-4-202ENST00000636813 85 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
PCDH9Q9HC56 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PCDH9Q9HC56 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.42□□□□□ -2.02
PCDH9Q9HC56 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
PCDH9Q9HC56 OR56A5-201ENST00000340110 738 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 RNU6-490P-201ENST00000362985 107 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 RNU6-700P-201ENST00000391043 107 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 RN7SKP61-201ENST00000410642 295 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.42□□□□□ -2.02
PCDH9Q9HC56 MRPS18CP6-201ENST00000423587 223 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 AC078809.1-201ENST00000427601 140 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 MTCO3P29-201ENST00000432119 779 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 snoU13.6-201ENST00000458785 104 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 Y_RNA.639-201ENST00000458981 102 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 Y_RNA.631-201ENST00000459607 101 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.42□□□□□ -2.02
PCDH9Q9HC56 RPL23AP75-201ENST00000491601 451 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 AC026436.1-201ENST00000510537 270 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 RNA5SP112-201ENST00000515937 99 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 RNU2-53P-201ENST00000516257 147 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 SCARNA11.3-201ENST00000517276 130 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 AC115990.1-201ENST00000526957 301 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 AP000889.1-201ENST00000530968 660 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 AL590705.4-201ENST00000532209 134 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.42□□□□□ -2.02
PCDH9Q9HC56 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.42□□□□□ -2.02
PCDH9Q9HC56 MIR3171-201ENST00000584270 74 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 MIR4719-201ENST00000585233 84 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 AL159153.1-201ENST00000619688 317 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 uc_338.22-201ENST00000622722 187 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 AC134503.1-201ENST00000633048 54 ntBASIC2.42□□□□□ -2.02
PCDH9Q9HC56 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PCDH9Q9HC56 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PCDH9Q9HC56 AC092268.1-201ENST00000342691 405 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 Y_RNA.5-201ENST00000362334 102 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 snoU2_19.1-201ENST00000362361 80 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 RNU6-655P-201ENST00000362858 107 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 Y_RNA.128-201ENST00000363391 112 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 Y_RNA.314-201ENST00000365114 102 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 Y_RNA.405-201ENST00000383979 100 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 RNU6-1227P-201ENST00000383981 107 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 Y_RNA.451-201ENST00000384200 100 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 Y_RNA.524-201ENST00000384564 100 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 Y_RNA.561-201ENST00000384694 100 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 MIR524-201ENST00000385242 87 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 MIR548P-201ENST00000408336 84 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 RNU6-1156P-201ENST00000410365 100 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 AC008267.5-201ENST00000424928 265 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.41□□□□□ -2.02
PCDH9Q9HC56 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.41□□□□□ -2.02
PCDH9Q9HC56 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.41□□□□□ -2.02
PCDH9Q9HC56 AC011753.1-201ENST00000451001 220 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.41□□□□□ -2.02
PCDH9Q9HC56 TOMM22P6-201ENST00000465035 409 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.41□□□□□ -2.02
PCDH9Q9HC56 AC234781.5-201ENST00000508429 271 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 AC109329.1-201ENST00000518744 317 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 AC021269.2-201ENST00000532318 330 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 SNRPGP18-201ENST00000553000 214 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 MYL12BP1-201ENST00000569826 507 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 MIR3616-201ENST00000584070 92 ntBASIC2.41□□□□□ -2.02
PCDH9Q9HC56 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.41□□□□□ -2.02
PCDH9Q9HC56 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.41□□□□□ -2.02
PCDH9Q9HC56 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PCDH9Q9HC56 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PCDH9Q9HC56 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
PCDH9Q9HC56 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.4□□□□□ -2.02
PCDH9Q9HC56 MTND4P27-201ENST00000450813 1354 ntBASIC2.4□□□□□ -2.02
PCDH9Q9HC56 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
PCDH9Q9HC56 RNU6-1115P-201ENST00000362490 106 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 RNU6-486P-201ENST00000363116 107 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 RNY3P11-201ENST00000364153 102 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 Y_RNA.428-201ENST00000384078 102 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 RNU1-52P-201ENST00000384190 164 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 MIR32-201ENST00000384965 70 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AL358453.1-201ENST00000422522 250 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AIMP1P2-201ENST00000425294 312 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AL139109.1-201ENST00000455491 297 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 RNU7-87P-201ENST00000459343 62 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AC087477.1-201ENST00000465747 340 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AL121594.1-201ENST00000475906 575 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AF186996.7-201ENST00000492781 209 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 RN7SL636P-201ENST00000497504 294 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 HMGB1P35-201ENST00000503360 598 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 RNU7-175P-201ENST00000515915 61 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 RNU6-976P-201ENST00000516086 111 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AC021231.3-201ENST00000558497 370 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AC020661.2-201ENST00000560114 134 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AC004584.2-201ENST00000570407 410 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AC010928.2-201ENST00000588017 287 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 RPL30P11-203ENST00000598995 310 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 267.5 ms