Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC019193.3-201ENST00000609144 554 ntBASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 AC092794.1-201ENST00000612734 582 ntBASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 Y_RNA.783-201ENST00000613546 102 ntBASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 U6atac.1-201ENST00000616025 117 ntBASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 AC009248.2-201ENST00000619826 254 ntBASIC1.91□□□□□ -2.1
VIPAS39Q9H9C1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.9□□□□□ -2.1
VIPAS39Q9H9C1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.1
VIPAS39Q9H9C1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 RNA5SP276-201ENST00000362580 94 ntBASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 Y_RNA.135-201ENST00000363439 95 ntBASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 BX510359.4-201ENST00000423750 193 ntBASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 MTND4LP16-201ENST00000440828 295 ntBASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 HMGN2P18-201ENST00000450680 270 ntBASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 HMGB3P17-201ENST00000504195 649 ntBASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 RNU6-567P-201ENST00000516746 107 ntBASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 RNA5SP137-201ENST00000516833 135 ntBASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 AF235103.2-201ENST00000525753 346 ntBASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 AP002770.2-201ENST00000543613 532 ntBASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 EIF4A1P12-201ENST00000551910 141 ntBASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 POLR3GP2-201ENST00000588366 668 ntBASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 AC018638.8-201ENST00000588755 281 ntBASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 BNIP3P10-201ENST00000605360 577 ntBASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 AC091932.3-201ENST00000624223 323 ntBASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 AC243829.7-201ENST00000633081 225 ntBASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 IGHVIII-44-202ENST00000636235 289 ntBASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
VIPAS39Q9H9C1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.89□□□□□ -2.11
VIPAS39Q9H9C1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.89□□□□□ -2.11
VIPAS39Q9H9C1 AC233981.2-201ENST00000611524 1614 ntBASIC1.89□□□□□ -2.11
VIPAS39Q9H9C1 MIR518A2-201ENST00000384966 87 ntBASIC1.89□□□□□ -2.11
VIPAS39Q9H9C1 RPS20P15-201ENST00000412792 311 ntBASIC1.89□□□□□ -2.11
VIPAS39Q9H9C1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.89□□□□□ -2.11
VIPAS39Q9H9C1 AL353705.4-201ENST00000449661 238 ntBASIC1.89□□□□□ -2.11
VIPAS39Q9H9C1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VIPAS39Q9H9C1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.89□□□□□ -2.11
VIPAS39Q9H9C1 AC018710.1-201ENST00000506509 158 ntBASIC1.89□□□□□ -2.11
VIPAS39Q9H9C1 Y_RNA.682-201ENST00000516457 100 ntBASIC1.89□□□□□ -2.11
VIPAS39Q9H9C1 RNA5SP490-201ENST00000517141 136 ntBASIC1.89□□□□□ -2.11
VIPAS39Q9H9C1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.89□□□□□ -2.11
VIPAS39Q9H9C1 MIR3618-201ENST00000580330 88 ntBASIC1.89□□□□□ -2.11
VIPAS39Q9H9C1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.89□□□□□ -2.11
VIPAS39Q9H9C1 AL133216.2-202ENST00000634512 349 ntBASIC1.89□□□□□ -2.11
VIPAS39Q9H9C1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
VIPAS39Q9H9C1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
VIPAS39Q9H9C1 AP006437.1-201ENST00000641440 3685 ntBASIC1.89□□□□□ -2.11
VIPAS39Q9H9C1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 Y_RNA.248-201ENST00000364501 109 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 SNORA18.2-201ENST00000383865 132 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 RNU6-1286P-201ENST00000383871 107 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 SNORD14D-201ENST00000384390 87 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 MIR487A-201ENST00000385009 80 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 FTH1P25-201ENST00000447665 469 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 FO393415.2-201ENST00000480085 343 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 AF186996.7-201ENST00000492781 209 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 ATP5EP1-201ENST00000510257 156 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 RNU5F-4P-201ENST00000516581 114 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 RNU6-1098P-201ENST00000516772 96 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 RNU6-566P-201ENST00000516790 107 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 RNA5SP454-201ENST00000517231 127 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 AP003033.1-201ENST00000527244 415 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 MIR4529-201ENST00000578110 78 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 SNORA59B-202ENST00000578183 701 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 FGF7P1-201ENST00000582820 288 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 AL096840.1-201ENST00000603287 93 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 SNRPGP19-201ENST00000603826 189 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 AL627230.6-201ENST00000611129 280 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.88□□□□□ -2.11
VIPAS39Q9H9C1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 MTND4P5-201ENST00000435821 1374 ntBASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 MIR449A-201ENST00000362113 91 ntBASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 SNORD50.1-201ENST00000362987 71 ntBASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 RNU5B-2P-201ENST00000363036 113 ntBASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 Y_RNA.301-201ENST00000364990 103 ntBASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 RNU6-1013P-201ENST00000384180 107 ntBASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 MIR597-201ENST00000384968 97 ntBASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 AL356776.1-201ENST00000406574 447 ntBASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 RNU2-20P-201ENST00000410425 191 ntBASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 AL139413.1-201ENST00000421309 217 ntBASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 MTATP6P13-201ENST00000438531 667 ntBASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 SNRPEP8-201ENST00000442866 260 ntBASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 RNU7-14P-201ENST00000459331 62 ntBASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 MTCO2P30-201ENST00000503662 364 ntBASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 AC107393.1-201ENST00000512403 346 ntBASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 RNU6-358P-201ENST00000516564 75 ntBASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.87□□□□□ -2.11
VIPAS39Q9H9C1 AP005639.2-201ENST00000527592 928 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms