Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 RNU6-612P-201ENST00000516909 102 ntBASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 DEFB131C-201ENST00000528817 165 ntBASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 AC084364.2-201ENST00000546924 395 ntBASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 AC091544.4-201ENST00000555268 342 ntBASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 AL353149.1-201ENST00000610667 244 ntBASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 AC245060.5-201ENST00000610778 3293 ntBASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 RNU6-227P-201ENST00000362865 103 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 SNORA18.2-201ENST00000383865 132 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 SNORA75-201ENST00000384158 137 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 MIR548B-201ENST00000385247 97 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 RNA5SP219-201ENST00000390940 113 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 MIR300-201ENST00000401138 83 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 AL161935.2-201ENST00000414627 60 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 AC073464.1-201ENST00000429823 534 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 snoU13.30-201ENST00000458951 104 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 UBE2DNL-203ENST00000474922 222 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 RPL39P5-202ENST00000512505 151 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 SNORA25.15-201ENST00000516487 89 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 Y_RNA.695-201ENST00000516715 107 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 RNA5SP481-201ENST00000516814 122 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 RNU6-323P-201ENST00000521915 107 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 AC027807.1-201ENST00000559921 996 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 AP005136.1-201ENST00000579765 429 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 AC004223.2-201ENST00000590309 544 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 AL158063.1-201ENST00000615349 536 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 AL354950.2-201ENST00000617939 290 ntBASIC1.12□□□□□ -2.23
SLIRPQ9GZT3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 ICE2P2-201ENST00000483823 2787 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 RNU6-545P-201ENST00000362681 104 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 RNU6-82P-201ENST00000363970 107 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 RNU1-96P-201ENST00000364163 162 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 RNU6-877P-201ENST00000383868 107 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 SNORD26-201ENST00000384147 75 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 SNORA67.6-201ENST00000391093 99 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 AL606923.1-201ENST00000406616 190 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 MIR1283-1-201ENST00000408494 87 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 RNU2-7P-201ENST00000410794 178 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 AL353193.1-201ENST00000421444 268 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 AC060773.1-201ENST00000421698 310 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 RNU6-1041P-201ENST00000516254 102 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 RNU2-34P-201ENST00000516534 121 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 SNORA59B-202ENST00000578183 701 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 AC121247.2-201ENST00000604776 136 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 MIR3976-201ENST00000606807 139 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 AC103705.1-201ENST00000619013 241 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 AC095038.3-201ENST00000634439 195 ntBASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SLIRPQ9GZT3 AC100821.1-201ENST00000523153 2479 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 RNU5B-2P-201ENST00000363036 113 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 SNORA29-201ENST00000384183 140 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 SNORA70B-201ENST00000384210 135 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 U8.13-201ENST00000390842 128 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 RPS26P42-201ENST00000413485 326 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 RPL30P13-201ENST00000418873 348 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 AC090960.1-201ENST00000421072 306 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 AL513185.2-201ENST00000425543 193 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 MTCO3P29-201ENST00000432119 779 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 AC027119.1-201ENST00000440877 241 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 OR2AQ1P-201ENST00000451972 200 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 snoU13.6-201ENST00000458785 104 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 RNU1-123P-201ENST00000458950 160 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 UBL5P3-201ENST00000475112 231 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 TRBV12-1-201ENST00000479785 344 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 HMGB1P29-201ENST00000505659 499 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 AC011406.1-201ENST00000512440 370 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 AC025465.4-201ENST00000513422 638 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 RNU6-189P-201ENST00000516120 101 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 RNU6-1069P-201ENST00000516612 133 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 AC015720.1-201ENST00000565251 277 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 AP001485.1-201ENST00000604799 199 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 PRR13P7-201ENST00000605538 430 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 AC063944.3-201ENST00000609969 533 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 AC008147.4-201ENST00000617570 1204 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 AC005562.2-201ENST00000618264 111 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 MIR8063-201ENST00000621930 81 ntBASIC1.1□□□□□ -2.23
SLIRPQ9GZT3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 BX322639.1-202ENST00000423987 2213 ntBASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.09□□□□□ -2.23
SLIRPQ9GZT3 RNU6-418P-201ENST00000384035 107 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms