Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC074085.1-201ENST00000413598 418 ntBASIC2.58□□□□□ -2
HERPUD2Q9BSE4 FTH1P25-201ENST00000447665 469 ntBASIC2.58□□□□□ -2
HERPUD2Q9BSE4 OR2AQ1P-201ENST00000451972 200 ntBASIC2.58□□□□□ -2
HERPUD2Q9BSE4 RNU7-14P-201ENST00000459331 62 ntBASIC2.58□□□□□ -2
HERPUD2Q9BSE4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.58□□□□□ -2
HERPUD2Q9BSE4 RNU6-1153P-201ENST00000516760 105 ntBASIC2.58□□□□□ -2
HERPUD2Q9BSE4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.58□□□□□ -2
HERPUD2Q9BSE4 AC009318.2-201ENST00000610917 651 ntBASIC2.58□□□□□ -2
HERPUD2Q9BSE4 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.58□□□□□ -2
HERPUD2Q9BSE4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
HERPUD2Q9BSE4 RNA5SP456-201ENST00000364002 114 ntBASIC2.57□□□□□ -2
HERPUD2Q9BSE4 RNU4-9P-201ENST00000364951 139 ntBASIC2.57□□□□□ -2
HERPUD2Q9BSE4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HERPUD2Q9BSE4 RN7SKP32-201ENST00000410167 303 ntBASIC2.57□□□□□ -2
HERPUD2Q9BSE4 AC027124.2-201ENST00000428249 105 ntBASIC2.57□□□□□ -2
HERPUD2Q9BSE4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.57□□□□□ -2
HERPUD2Q9BSE4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.57□□□□□ -2
HERPUD2Q9BSE4 AF186996.7-201ENST00000492781 209 ntBASIC2.57□□□□□ -2
HERPUD2Q9BSE4 AC116337.1-201ENST00000509680 687 ntBASIC2.57□□□□□ -2
HERPUD2Q9BSE4 SCARNA15.1-201ENST00000516384 125 ntBASIC2.57□□□□□ -2
HERPUD2Q9BSE4 RNU6-1098P-201ENST00000516772 96 ntBASIC2.57□□□□□ -2
HERPUD2Q9BSE4 RNU2-19P-201ENST00000517288 84 ntBASIC2.57□□□□□ -2
HERPUD2Q9BSE4 AL133216.2-202ENST00000634512 349 ntBASIC2.57□□□□□ -2
HERPUD2Q9BSE4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.57□□□□□ -2
HERPUD2Q9BSE4 MIR320B2-201ENST00000408479 138 ntBASIC2.56□□□□□ -2
HERPUD2Q9BSE4 RNA5SP181-201ENST00000410246 98 ntBASIC2.56□□□□□ -2
HERPUD2Q9BSE4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.56□□□□□ -2
HERPUD2Q9BSE4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.56□□□□□ -2
HERPUD2Q9BSE4 AC107399.1-201ENST00000451226 265 ntBASIC2.56□□□□□ -2
HERPUD2Q9BSE4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.56□□□□□ -2
HERPUD2Q9BSE4 AC079354.2-201ENST00000453523 154 ntBASIC2.56□□□□□ -2
HERPUD2Q9BSE4 AC055731.1-201ENST00000474387 401 ntBASIC2.56□□□□□ -2
HERPUD2Q9BSE4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.56□□□□□ -2
HERPUD2Q9BSE4 MTND5P5-201ENST00000503764 376 ntBASIC2.56□□□□□ -2
HERPUD2Q9BSE4 RPL23AP94-201ENST00000512518 302 ntBASIC2.56□□□□□ -2
HERPUD2Q9BSE4 RNU7-30P-201ENST00000516835 62 ntBASIC2.56□□□□□ -2
HERPUD2Q9BSE4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.56□□□□□ -2
HERPUD2Q9BSE4 AC026470.2-201ENST00000561492 181 ntBASIC2.56□□□□□ -2
HERPUD2Q9BSE4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.56□□□□□ -2
HERPUD2Q9BSE4 AC005034.5-201ENST00000604219 466 ntBASIC2.56□□□□□ -2
HERPUD2Q9BSE4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.56□□□□□ -2
HERPUD2Q9BSE4 AL359697.1-201ENST00000624879 587 ntBASIC2.56□□□□□ -2
HERPUD2Q9BSE4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.56□□□□□ -2
HERPUD2Q9BSE4 SCARNA4-201ENST00000629045 128 ntBASIC2.56□□□□□ -2
HERPUD2Q9BSE4 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
HERPUD2Q9BSE4 AC006026.1-201ENST00000444025 1803 ntBASIC2.56□□□□□ -2
HERPUD2Q9BSE4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.56□□□□□ -2
HERPUD2Q9BSE4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HERPUD2Q9BSE4 RNU1-51P-201ENST00000365345 176 ntBASIC2.55□□□□□ -2
HERPUD2Q9BSE4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
HERPUD2Q9BSE4 SNORA18.2-201ENST00000383865 132 ntBASIC2.55□□□□□ -2
HERPUD2Q9BSE4 SNORA6-201ENST00000384033 151 ntBASIC2.55□□□□□ -2
HERPUD2Q9BSE4 RPS12P2-201ENST00000439728 269 ntBASIC2.55□□□□□ -2
HERPUD2Q9BSE4 AL035666.1-201ENST00000446195 348 ntBASIC2.55□□□□□ -2
HERPUD2Q9BSE4 AL118496.2-201ENST00000448300 230 ntBASIC2.55□□□□□ -2
HERPUD2Q9BSE4 FO393415.2-201ENST00000480085 343 ntBASIC2.55□□□□□ -2
HERPUD2Q9BSE4 HMGN1P12-201ENST00000499125 195 ntBASIC2.55□□□□□ -2
HERPUD2Q9BSE4 RN7SKP24-201ENST00000515888 284 ntBASIC2.55□□□□□ -2
HERPUD2Q9BSE4 RNU2-44P-201ENST00000516795 194 ntBASIC2.55□□□□□ -2
HERPUD2Q9BSE4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.55□□□□□ -2
HERPUD2Q9BSE4 PRELID2P1-201ENST00000552837 301 ntBASIC2.55□□□□□ -2
HERPUD2Q9BSE4 AC005730.3-201ENST00000583067 366 ntBASIC2.55□□□□□ -2
HERPUD2Q9BSE4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.55□□□□□ -2
HERPUD2Q9BSE4 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.55□□□□□ -2
HERPUD2Q9BSE4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.55□□□□□ -2
HERPUD2Q9BSE4 MIR6895-201ENST00000613497 78 ntBASIC2.55□□□□□ -2
HERPUD2Q9BSE4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.55□□□□□ -2
HERPUD2Q9BSE4 Y_RNA.804-201ENST00000615262 101 ntBASIC2.55□□□□□ -2
HERPUD2Q9BSE4 MIR6817-201ENST00000615588 66 ntBASIC2.55□□□□□ -2
HERPUD2Q9BSE4 AC005562.2-201ENST00000618264 111 ntBASIC2.55□□□□□ -2
HERPUD2Q9BSE4 AC130454.1-201ENST00000622948 401 ntBASIC2.55□□□□□ -2
HERPUD2Q9BSE4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.55□□□□□ -2
HERPUD2Q9BSE4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.54□□□□□ -2
HERPUD2Q9BSE4 MIR449A-201ENST00000362113 91 ntBASIC2.54□□□□□ -2
HERPUD2Q9BSE4 RNA5SP68-201ENST00000363885 119 ntBASIC2.54□□□□□ -2
HERPUD2Q9BSE4 RNU6-596P-201ENST00000365395 98 ntBASIC2.54□□□□□ -2
HERPUD2Q9BSE4 RNU6-160P-201ENST00000384591 107 ntBASIC2.54□□□□□ -2
HERPUD2Q9BSE4 RNU11-3P-201ENST00000391111 133 ntBASIC2.54□□□□□ -2
HERPUD2Q9BSE4 MIR548F5-201ENST00000408421 86 ntBASIC2.54□□□□□ -2
HERPUD2Q9BSE4 RPL21P111-201ENST00000418453 477 ntBASIC2.54□□□□□ -2
HERPUD2Q9BSE4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.54□□□□□ -2
HERPUD2Q9BSE4 AL358453.1-201ENST00000422522 250 ntBASIC2.54□□□□□ -2
HERPUD2Q9BSE4 USP9YP30-201ENST00000430729 455 ntBASIC2.54□□□□□ -2
HERPUD2Q9BSE4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.54□□□□□ -2
HERPUD2Q9BSE4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.54□□□□□ -2
HERPUD2Q9BSE4 RNA5SP82-201ENST00000516707 92 ntBASIC2.54□□□□□ -2
HERPUD2Q9BSE4 MYL12BP1-201ENST00000569826 507 ntBASIC2.54□□□□□ -2
HERPUD2Q9BSE4 AC044792.1-201ENST00000593294 196 ntBASIC2.54□□□□□ -2
HERPUD2Q9BSE4 AC016727.2-201ENST00000603988 621 ntBASIC2.54□□□□□ -2
HERPUD2Q9BSE4 SNRPGP20-201ENST00000604477 205 ntBASIC2.54□□□□□ -2
HERPUD2Q9BSE4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.54□□□□□ -2
HERPUD2Q9BSE4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.54□□□□□ -2
HERPUD2Q9BSE4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
HERPUD2Q9BSE4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HERPUD2Q9BSE4 Y_RNA.11-201ENST00000362375 109 ntBASIC2.53□□□□□ -2
HERPUD2Q9BSE4 RNU6-845P-201ENST00000362578 103 ntBASIC2.53□□□□□ -2
HERPUD2Q9BSE4 RNU1-76P-201ENST00000362903 159 ntBASIC2.53□□□□□ -2
HERPUD2Q9BSE4 Y_RNA.279-201ENST00000364763 95 ntBASIC2.53□□□□□ -2
HERPUD2Q9BSE4 XGY1-201ENST00000381172 446 ntBASIC2.53□□□□□ -2
HERPUD2Q9BSE4 Y_RNA.535-201ENST00000384612 99 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms