Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 RNU6-780P-201ENST00000391030 104 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 RNU6-908P-201ENST00000410160 94 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.44□□□□□ -2.18
FOXC2Q99958 AL590556.1-201ENST00000423231 483 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.44□□□□□ -2.18
FOXC2Q99958 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.44□□□□□ -2.18
FOXC2Q99958 AL645568.3-201ENST00000433683 316 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.44□□□□□ -2.18
FOXC2Q99958 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.44□□□□□ -2.18
FOXC2Q99958 MTCO2P7-201ENST00000446518 666 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 RNU1-123P-201ENST00000458950 160 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 MTCO3P38-201ENST00000468910 766 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.44□□□□□ -2.18
FOXC2Q99958 RNU5F-2P-201ENST00000516066 82 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 Y_RNA.670-201ENST00000516255 105 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 RNU6-720P-201ENST00000516363 108 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.44□□□□□ -2.18
FOXC2Q99958 AC109479.2-201ENST00000517842 174 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 MTND4P7-201ENST00000523876 130 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 AC115990.1-201ENST00000526957 301 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.44□□□□□ -2.18
FOXC2Q99958 AC004223.2-201ENST00000590309 544 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.44□□□□□ -2.18
FOXC2Q99958 AC012493.3-201ENST00000604494 112 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 AC015540.1-201ENST00000615828 501 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 AC099654.12-201ENST00000639868 649 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 MTND4P14-201ENST00000435799 1354 ntBASIC1.44□□□□□ -2.18
FOXC2Q99958 RNU6-336P-201ENST00000364891 107 ntBASIC1.43□□□□□ -2.18
FOXC2Q99958 SNORA48.1-201ENST00000390879 135 ntBASIC1.43□□□□□ -2.18
FOXC2Q99958 VN1R36P-201ENST00000414936 291 ntBASIC1.43□□□□□ -2.18
FOXC2Q99958 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.43□□□□□ -2.18
FOXC2Q99958 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.43□□□□□ -2.18
FOXC2Q99958 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.43□□□□□ -2.18
FOXC2Q99958 AC091885.1-201ENST00000506658 268 ntBASIC1.43□□□□□ -2.18
FOXC2Q99958 SNORA14.1-201ENST00000516113 141 ntBASIC1.43□□□□□ -2.18
FOXC2Q99958 RNU6-1069P-201ENST00000516612 133 ntBASIC1.43□□□□□ -2.18
FOXC2Q99958 CENPUP1-201ENST00000526649 1202 ntBASIC1.43□□□□□ -2.18
FOXC2Q99958 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.43□□□□□ -2.18
FOXC2Q99958 HMGB1P33-201ENST00000563485 527 ntBASIC1.43□□□□□ -2.18
FOXC2Q99958 MIR3122-201ENST00000577243 73 ntBASIC1.43□□□□□ -2.18
FOXC2Q99958 BNIP3P16-201ENST00000589779 534 ntBASIC1.43□□□□□ -2.18
FOXC2Q99958 AC018889.1-201ENST00000605372 397 ntBASIC1.43□□□□□ -2.18
FOXC2Q99958 AF250324.2-201ENST00000608299 610 ntBASIC1.43□□□□□ -2.18
FOXC2Q99958 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.43□□□□□ -2.18
FOXC2Q99958 RMST_2.1-201ENST00000617263 136 ntBASIC1.43□□□□□ -2.18
FOXC2Q99958 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.43□□□□□ -2.18
FOXC2Q99958 MTND5P35-201ENST00000557537 1720 ntBASIC1.43□□□□□ -2.18
FOXC2Q99958 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
FOXC2Q99958 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
FOXC2Q99958 CBX3P1-201ENST00000325243 554 ntBASIC1.42□□□□□ -2.18
FOXC2Q99958 RNU6-428P-201ENST00000362942 107 ntBASIC1.42□□□□□ -2.18
FOXC2Q99958 SNORA7.1-201ENST00000363750 139 ntBASIC1.42□□□□□ -2.18
FOXC2Q99958 RNU6-522P-201ENST00000364497 107 ntBASIC1.42□□□□□ -2.18
FOXC2Q99958 SNORD32A-201ENST00000364805 84 ntBASIC1.42□□□□□ -2.18
FOXC2Q99958 Y_RNA.378-201ENST00000365652 113 ntBASIC1.42□□□□□ -2.18
FOXC2Q99958 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.42□□□□□ -2.18
FOXC2Q99958 MIR934-201ENST00000401241 83 ntBASIC1.42□□□□□ -2.18
FOXC2Q99958 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
FOXC2Q99958 SNAP23P1-201ENST00000433229 246 ntBASIC1.42□□□□□ -2.18
FOXC2Q99958 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.42□□□□□ -2.18
FOXC2Q99958 AL035666.1-201ENST00000446195 348 ntBASIC1.42□□□□□ -2.18
FOXC2Q99958 HMGN1P7-201ENST00000491722 313 ntBASIC1.42□□□□□ -2.18
FOXC2Q99958 AC022447.4-201ENST00000504053 364 ntBASIC1.42□□□□□ -2.18
FOXC2Q99958 ATP5EP1-201ENST00000510257 156 ntBASIC1.42□□□□□ -2.18
FOXC2Q99958 RNU6-377P-201ENST00000515965 102 ntBASIC1.42□□□□□ -2.18
FOXC2Q99958 RNU6-506P-201ENST00000516553 94 ntBASIC1.42□□□□□ -2.18
FOXC2Q99958 SNORA44.1-201ENST00000517031 108 ntBASIC1.42□□□□□ -2.18
FOXC2Q99958 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.42□□□□□ -2.18
FOXC2Q99958 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXC2Q99958 AP000654.2-201ENST00000605633 586 ntBASIC1.42□□□□□ -2.18
FOXC2Q99958 U2.17-201ENST00000611454 95 ntBASIC1.42□□□□□ -2.18
FOXC2Q99958 MIR6734-201ENST00000621166 68 ntBASIC1.42□□□□□ -2.18
FOXC2Q99958 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
FOXC2Q99958 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
FOXC2Q99958 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.42□□□□□ -2.18
FOXC2Q99958 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
FOXC2Q99958 AC121333.1-201ENST00000567488 2709 ntBASIC1.41□□□□□ -2.18
FOXC2Q99958 AC006026.1-201ENST00000444025 1803 ntBASIC1.41□□□□□ -2.18
FOXC2Q99958 RNA5SP493-201ENST00000364115 91 ntBASIC1.41□□□□□ -2.18
FOXC2Q99958 RNY1-201ENST00000364228 113 ntBASIC1.41□□□□□ -2.18
FOXC2Q99958 SNORA16.1-201ENST00000364597 132 ntBASIC1.41□□□□□ -2.18
FOXC2Q99958 RNU6-483P-201ENST00000384088 108 ntBASIC1.41□□□□□ -2.18
FOXC2Q99958 AL606923.1-201ENST00000406616 190 ntBASIC1.41□□□□□ -2.18
FOXC2Q99958 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.41□□□□□ -2.18
FOXC2Q99958 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.41□□□□□ -2.18
FOXC2Q99958 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.41□□□□□ -2.18
FOXC2Q99958 MTND3P16-201ENST00000452205 344 ntBASIC1.41□□□□□ -2.18
FOXC2Q99958 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.41□□□□□ -2.18
FOXC2Q99958 AC092436.3-201ENST00000511788 257 ntBASIC1.41□□□□□ -2.18
FOXC2Q99958 RNA5SP401-201ENST00000515920 127 ntBASIC1.41□□□□□ -2.18
FOXC2Q99958 RNA5SP102-201ENST00000516865 106 ntBASIC1.41□□□□□ -2.18
FOXC2Q99958 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.41□□□□□ -2.18
FOXC2Q99958 AL157687.1-201ENST00000554853 619 ntBASIC1.41□□□□□ -2.18
FOXC2Q99958 AL512360.1-201ENST00000555346 234 ntBASIC1.41□□□□□ -2.18
FOXC2Q99958 TPRKBP2-201ENST00000565969 475 ntBASIC1.41□□□□□ -2.18
FOXC2Q99958 MIR3198-2-201ENST00000577868 80 ntBASIC1.41□□□□□ -2.18
FOXC2Q99958 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.41□□□□□ -2.18
FOXC2Q99958 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.41□□□□□ -2.18
FOXC2Q99958 MIR1321-201ENST00000637766 79 ntBASIC1.41□□□□□ -2.18
FOXC2Q99958 AC068137.3-201ENST00000639191 341 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms