Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RNU6-1314P-201ENST00000517139 104 ntBASIC1.86□□□□□ -2.11
SSX3Q99909 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.86□□□□□ -2.11
SSX3Q99909 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.86□□□□□ -2.11
SSX3Q99909 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SSX3Q99909 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.86□□□□□ -2.11
SSX3Q99909 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.86□□□□□ -2.11
SSX3Q99909 AC090517.1-201ENST00000569307 266 ntBASIC1.86□□□□□ -2.11
SSX3Q99909 FGF7P1-201ENST00000582820 288 ntBASIC1.86□□□□□ -2.11
SSX3Q99909 AC023043.2-201ENST00000589678 1026 ntBASIC1.86□□□□□ -2.11
SSX3Q99909 AC025754.2-201ENST00000606491 432 ntBASIC1.86□□□□□ -2.11
SSX3Q99909 AL022345.1-201ENST00000607292 135 ntBASIC1.86□□□□□ -2.11
SSX3Q99909 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.86□□□□□ -2.11
SSX3Q99909 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.86□□□□□ -2.11
SSX3Q99909 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.86□□□□□ -2.11
SSX3Q99909 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SSX3Q99909 Y_RNA.151-201ENST00000363566 112 ntBASIC1.85□□□□□ -2.11
SSX3Q99909 RNU6-1286P-201ENST00000383871 107 ntBASIC1.85□□□□□ -2.11
SSX3Q99909 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.85□□□□□ -2.11
SSX3Q99909 RNA5SP494-201ENST00000410653 129 ntBASIC1.85□□□□□ -2.11
SSX3Q99909 RNU2-41P-201ENST00000410991 178 ntBASIC1.85□□□□□ -2.11
SSX3Q99909 RN7SKP192-201ENST00000411291 327 ntBASIC1.85□□□□□ -2.11
SSX3Q99909 EIF1P1-201ENST00000421436 341 ntBASIC1.85□□□□□ -2.11
SSX3Q99909 RPS15AP28-201ENST00000435088 386 ntBASIC1.85□□□□□ -2.11
SSX3Q99909 AL353572.1-201ENST00000442490 417 ntBASIC1.85□□□□□ -2.11
SSX3Q99909 RNU6-717P-201ENST00000459076 104 ntBASIC1.85□□□□□ -2.11
SSX3Q99909 RPS29P25-201ENST00000481709 171 ntBASIC1.85□□□□□ -2.11
SSX3Q99909 HMGB3P17-201ENST00000504195 649 ntBASIC1.85□□□□□ -2.11
SSX3Q99909 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.85□□□□□ -2.11
SSX3Q99909 AC005741.1-201ENST00000511094 432 ntBASIC1.85□□□□□ -2.11
SSX3Q99909 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.85□□□□□ -2.11
SSX3Q99909 MRPS36P4-201ENST00000534436 298 ntBASIC1.85□□□□□ -2.11
SSX3Q99909 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.85□□□□□ -2.11
SSX3Q99909 MIR5007-201ENST00000583098 95 ntBASIC1.85□□□□□ -2.11
SSX3Q99909 AP000907.4-201ENST00000604143 237 ntBASIC1.85□□□□□ -2.11
SSX3Q99909 AC009994.1-201ENST00000606889 253 ntBASIC1.85□□□□□ -2.11
SSX3Q99909 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.85□□□□□ -2.11
SSX3Q99909 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.85□□□□□ -2.11
SSX3Q99909 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.85□□□□□ -2.11
SSX3Q99909 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.84□□□□□ -2.11
SSX3Q99909 RNU1-58P-201ENST00000362413 163 ntBASIC1.84□□□□□ -2.11
SSX3Q99909 Y_RNA.212-201ENST00000364177 102 ntBASIC1.84□□□□□ -2.11
SSX3Q99909 SNORA32.2-201ENST00000384049 122 ntBASIC1.84□□□□□ -2.11
SSX3Q99909 RNU6-784P-201ENST00000384330 106 ntBASIC1.84□□□□□ -2.11
SSX3Q99909 RNA5SP212-201ENST00000391223 107 ntBASIC1.84□□□□□ -2.11
SSX3Q99909 RNA5SP501-201ENST00000410990 112 ntBASIC1.84□□□□□ -2.11
SSX3Q99909 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.84□□□□□ -2.11
SSX3Q99909 DPH3P2-201ENST00000422618 250 ntBASIC1.84□□□□□ -2.11
SSX3Q99909 AL139415.2-201ENST00000431968 163 ntBASIC1.84□□□□□ -2.11
SSX3Q99909 MTND1P4-201ENST00000435196 415 ntBASIC1.84□□□□□ -2.11
SSX3Q99909 MTND1P11-201ENST00000456661 876 ntBASIC1.84□□□□□ -2.11
SSX3Q99909 AC130509.1-201ENST00000464158 433 ntBASIC1.84□□□□□ -2.11
SSX3Q99909 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SSX3Q99909 RNU5F-4P-201ENST00000516581 114 ntBASIC1.84□□□□□ -2.11
SSX3Q99909 RNU6-273P-201ENST00000516937 96 ntBASIC1.84□□□□□ -2.11
SSX3Q99909 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.84□□□□□ -2.11
SSX3Q99909 AC080078.2-201ENST00000603766 501 ntBASIC1.84□□□□□ -2.11
SSX3Q99909 AC012493.3-201ENST00000604494 112 ntBASIC1.84□□□□□ -2.11
SSX3Q99909 AC093913.1-201ENST00000614178 329 ntBASIC1.84□□□□□ -2.11
SSX3Q99909 AC007014.2-201ENST00000615581 479 ntBASIC1.84□□□□□ -2.11
SSX3Q99909 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.84□□□□□ -2.11
SSX3Q99909 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
SSX3Q99909 AC233981.2-201ENST00000611524 1614 ntBASIC1.84□□□□□ -2.12
SSX3Q99909 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
SSX3Q99909 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SSX3Q99909 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SSX3Q99909 Y_RNA.135-201ENST00000363439 95 ntBASIC1.83□□□□□ -2.12
SSX3Q99909 RNU6-438P-201ENST00000365561 103 ntBASIC1.83□□□□□ -2.12
SSX3Q99909 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
SSX3Q99909 SNORD116-11-201ENST00000383882 92 ntBASIC1.83□□□□□ -2.12
SSX3Q99909 RNU6-1013P-201ENST00000384180 107 ntBASIC1.83□□□□□ -2.12
SSX3Q99909 MIR517A-201ENST00000385001 87 ntBASIC1.83□□□□□ -2.12
SSX3Q99909 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SSX3Q99909 Z82205.1-201ENST00000428456 297 ntBASIC1.83□□□□□ -2.12
SSX3Q99909 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SSX3Q99909 FTH1P25-201ENST00000447665 469 ntBASIC1.83□□□□□ -2.12
SSX3Q99909 AL513124.1-201ENST00000450410 614 ntBASIC1.83□□□□□ -2.12
SSX3Q99909 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.83□□□□□ -2.12
SSX3Q99909 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.83□□□□□ -2.12
SSX3Q99909 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.83□□□□□ -2.12
SSX3Q99909 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.83□□□□□ -2.12
SSX3Q99909 MIR3942-201ENST00000585264 109 ntBASIC1.83□□□□□ -2.12
SSX3Q99909 POLR3GP2-201ENST00000588366 668 ntBASIC1.83□□□□□ -2.12
SSX3Q99909 CYP2C61P-201ENST00000604072 290 ntBASIC1.83□□□□□ -2.12
SSX3Q99909 RPL17P51-201ENST00000605218 238 ntBASIC1.83□□□□□ -2.12
SSX3Q99909 AC130454.1-201ENST00000622948 401 ntBASIC1.83□□□□□ -2.12
SSX3Q99909 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SSX3Q99909 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.82□□□□□ -2.12
SSX3Q99909 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.82□□□□□ -2.12
SSX3Q99909 RNU5B-2P-201ENST00000363036 113 ntBASIC1.82□□□□□ -2.12
SSX3Q99909 RNU6-160P-201ENST00000384591 107 ntBASIC1.82□□□□□ -2.12
SSX3Q99909 RN7SKP223-201ENST00000410582 62 ntBASIC1.82□□□□□ -2.12
SSX3Q99909 MTND4LP16-201ENST00000440828 295 ntBASIC1.82□□□□□ -2.12
SSX3Q99909 RNU7-14P-201ENST00000459331 62 ntBASIC1.82□□□□□ -2.12
SSX3Q99909 ATP5EP1-201ENST00000510257 156 ntBASIC1.82□□□□□ -2.12
SSX3Q99909 RNU1-41P-201ENST00000516161 162 ntBASIC1.82□□□□□ -2.12
SSX3Q99909 RNU6-864P-201ENST00000516256 108 ntBASIC1.82□□□□□ -2.12
SSX3Q99909 RNU1-48P-201ENST00000516400 162 ntBASIC1.82□□□□□ -2.12
SSX3Q99909 RNU6-1098P-201ENST00000516772 96 ntBASIC1.82□□□□□ -2.12
SSX3Q99909 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.82□□□□□ -2.12
SSX3Q99909 SNRPGP18-201ENST00000553000 214 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 261.2 ms