Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 uc_338.25-201ENST00000613756 156 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 SCARNA17.4-201ENST00000614296 143 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 MIR7975-201ENST00000619350 68 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 XIST_intron.1-201ENST00000619444 68 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 UCA1.1-201ENST00000620952 75 ntBASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HIST1H2AJQ99878 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 RNU6-727P-201ENST00000363592 107 ntBASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 CD24P4-201ENST00000382840 243 ntBASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 Y_RNA.462-201ENST00000384268 102 ntBASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 MIR670-201ENST00000390142 98 ntBASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 SNORA48.7-201ENST00000391302 135 ntBASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 RPS3P1-201ENST00000456781 192 ntBASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 AC068657.1-201ENST00000520807 306 ntBASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 AC084757.4-201ENST00000616350 526 ntBASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 MIR6075-201ENST00000620782 95 ntBASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 AC018692.3-201ENST00000623929 123 ntBASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 AL359854.1-201ENST00000614203 1594 ntBASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HIST1H2AJQ99878 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 RNU6-290P-201ENST00000365212 101 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 Y_RNA.416-201ENST00000384014 113 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 RNU6-245P-201ENST00000384020 107 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 RNU6-793P-201ENST00000384233 104 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 SNORA46.1-201ENST00000391069 153 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 MIR548H3-201ENST00000408771 118 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 RN7SKP27-201ENST00000410684 333 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 AC097463.2-201ENST00000421074 142 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 YME1L1P1-201ENST00000429435 297 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 UQCRBP2-201ENST00000447827 297 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 AC117440.1-201ENST00000474107 571 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 RNU7-110P-201ENST00000516891 62 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 RNU6-111P-201ENST00000517179 105 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 RNA5SP380-201ENST00000517190 98 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 MIR2682-201ENST00000580305 110 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 MIR4423-201ENST00000580922 80 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 AC011471.1-201ENST00000585766 187 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 AL356575.1-201ENST00000603008 283 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 AC107294.3-201ENST00000609211 526 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 AC012314.7-201ENST00000619693 93 ntBASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
HIST1H2AJQ99878 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 AC000403.1-201ENST00000613696 3585 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 RNU4-90P-201ENST00000362773 141 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 RNU5F-3P-201ENST00000363767 117 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 Y_RNA.570-201ENST00000384750 101 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 SNORA12-201ENST00000391162 147 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 AL512633.1-201ENST00000399931 655 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 AL603910.2-201ENST00000407268 136 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 RNU4-47P-201ENST00000410876 114 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 RN7SKP58-201ENST00000411010 305 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 RNU5A-5P-201ENST00000411054 116 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 AC007395.1-201ENST00000451333 677 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 RN7SL601P-201ENST00000471221 293 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 DEFB131C-201ENST00000528817 165 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 AK6P2-201ENST00000549020 471 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 EIF4A1P12-201ENST00000551910 141 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 AC055872.1-201ENST00000570978 278 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 MIR1254-2-201ENST00000579553 63 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 MIR4429-201ENST00000580105 73 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 MIR4765-201ENST00000585007 77 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 SNRPGP20-201ENST00000604477 205 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 SNORD113-5-201ENST00000607261 78 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 AC011373.1-201ENST00000607270 237 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 AL442067.1-201ENST00000613261 223 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 AC141273.2-201ENST00000618989 130 ntBASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HIST1H2AJQ99878 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HIST1H2AJQ99878 AC091152.2-201ENST00000591628 2569 ntBASIC3.08□□□□□ -1.92
HIST1H2AJQ99878 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.08□□□□□ -1.92
HIST1H2AJQ99878 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HIST1H2AJQ99878 Y_RNA.20-201ENST00000362479 113 ntBASIC3.08□□□□□ -1.92
HIST1H2AJQ99878 Y_RNA.54-201ENST00000362766 105 ntBASIC3.08□□□□□ -1.92
HIST1H2AJQ99878 U3.9-201ENST00000363823 204 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms